@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA0164: (2015-12-24 )
MLDFSAHALPYASQRSPVHARRGMVATSQPQAAQVGLEILRRGGNAIDAAIATAAALTVVEPTGCGIGGDAFALVWTRGRLHGLDASGRAPGLLDRERVRAAGHERMPLYGWTPVTVPGCPAAWGELSRRFGKLPFEQLLRPAIELARDGFPVSPVIARLWQSGLDKFRAALPQRPELRAWFDEFLIDGRAPRAGEVFRQPGQADTLDELARSQCESFYRGELARAIVGHAECSGGYLRAEDLAGYQAKWVEPISLNYRGYDVWEIPPSGQGLIALMTLNILKGFEFGERDCARTWHRQLEAMKLAYVDGLHYISQPQSMRVSVEELLHEDYAASRRALIGERALDPSPGQPRPGGTVYLACGDEEGNLVSFIQSNYHGFGSGVVVPGTGIALQNRGAEFSLDPDHVNCLEPGKQTFHTIIPGFLSKDGVPLGPFGVMGAYMQPQGHVQMVMNLVDFGLNPQAALDAPRWQWLGGLRVGIEHAAPRALAAELAQRGHQVEIAYDSTSYGRGQIVLRDPASGVLCGGTEPRTDSQIAVW
Atome Classification :
(20 SA)
.........10........20........30........40........50........60........70....-.-..-.80..---......90.------.......---100.---...-...110-.-........120.......130.......140.......150.......160....-...170.......180......-.190.......200.......210.......220.......230.......240.......250.......260....-...270......-..280....-----...--290........-.300.....--....310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470----........480.......490.......500.......510.......520.......530......-
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MLDFSAHALPYASQRSP
V
H
A
RRGMVATSQP
Q
A
A
Q
V
G
L
E
I
L
R
RGGN
A
I
D
A
A
I
A
T
A
A
A
L
T
V
VEPTGCGIGGD
A
F
A
L
V
-
W
-TR-GRLHG---LDASGRAPG------L
L
D
R
E
R
V
---
R
AAG---HER-MPLY---G-WTPVTVPGCP
A
A
W
G
E
L
S
R
R
FGKL
P
F
E
Q
L
L
R
P
A
I
E
L
ARDGFP
V
S
P
V
I
A
R
L
W
Q
S
G
L
D
-
K
F
R
A
ALPQRP
E
L
R
A
W
F
D
E
F
LID-GRAPRA
G
E
V
F
RQPGQA
D
T
L
D
E
L
A
R
S
Q
C
E
S
F
Y
R
G
E
L
A
R
A
I
VGHAECSGG
Y
L
R
A
E
DLAGYQ
A
K
WV
E
P
I
S
L
N
YRG
Y
D
V
WEI-PPSG-Q
G
L
I
A
L
M
-
T
L
N
I
L
KGFE-----FG
E
--
R
--
D
C
A
R
T
W
H
R
-
Q
L
--
E
A
M
K
L
--
A
Y
VDG
L
H
YISQP
Q
S
M
R
V
S
V
E
E
L
L
H
E
D
Y
A
A
S
R
R
A
L
IGERALDPSPGQPRPG
G
T
V
Y
L
A
CGDEEG
N
L
V
S
F
I
Q
SNYHGFGS
G
V
V
VPGT
G
I
A
L
QNRGAEFSLDPDHVNCLEPG
K
Q
T
F
H
T
I
I
P
G
F
LSKDGVPLG
P
F
G
VMGAYMQPQ
G
H
V
Q
M
V
M
N
L
V
DFGL
N
P
Q
AALDAPR
W
Q
-----
W
LG
G
L
R
V
G
I
EHAA
P
R
A
L
A
A
E
L
A
QRG
H
Q
V
E
I
A
YDSTSYGR
G
Q
I
V
L
RDPAS
G
V
LCGGTEPRTDSQIAVW-
1
PsiBlast_PDB
99.73
60%
-86
- C4 -
2NLZ
-
?
A:
[5-539]
---
F
D
P
Q
S
Y
P
Y
P
S
R
R
N
V
V
Y
A
K
N
G
M
V
A
T
S
Q
P
L
A
A
Q
A
G
L
D
I
L
K
A
G
G
N
A
I
D
A
A
I
A
T
A
T
A
L
T
V
L
E
P
T
S
N
G
I
G
S
D
A
F
A
L
V
-
W
-
T
K
-
G
K
L
H
G
---
L
N
G
S
G
R
A
P
M
------
S
L
T
M
E
A
V
---
K
A
K
G
---
Y
E
Q
E
L
P
P
Y
---
G
-
V
I
P
V
T
V
P
G
A
P
G
A
W
A
E
L
A
K
M
Y
G
N
L
P
L
A
A
S
L
A
P
A
I
R
Y
A
E
E
G
Y
P
V
T
P
T
L
A
K
Y
W
K
A
A
Y
D
-
R
V
K
T
E
W
T
D
D
-
V
Y
Q
P
W
F
D
T
F
A
P
K
-
G
R
A
P
R
V
G
E
V
W
R
S
Q
G
H
A
D
T
L
R
S
I
A
E
S
N
G
E
S
F
Y
R
G
E
L
A
D
Q
I
H
A
F
F
D
K
H
G
G
Y
L
T
K
E
D
L
A
C
Y
R
P
E
W
V
E
P
I
S
I
D
Y
R
G
Y
R
V
W
E
I
-
P
P
N
G
-
Q
G
L
V
A
L
E
-
A
L
N
I
V
K
G
F
E
-----
F
Y
H
--
K
--
D
T
V
D
T
Y
H
K
-
Q
I
--
E
A
M
K
L
--
A
F
V
D
G
M
K
Y
V
T
E
P
S
D
M
S
V
S
V
E
Q
L
L
S
D
E
Y
A
T
E
R
R
K
E
I
G
E
Q
A
L
T
P
E
P
G
T
P
----
T
V
Y
L
A
T
A
D
G
D
G
N
M
V
S
F
I
Q
S
N
Y
M
G
F
G
S
G
V
V
V
P
G
T
G
I
A
M
Q
N
R
G
H
N
F
S
L
D
P
N
H
D
N
A
L
K
P
G
K
R
T
Y
H
T
I
I
P
G
F
L
T
K
N
D
Q
P
I
G
P
F
G
V
M
G
G
F
M
Q
P
Q
G
H
M
Q
V
M
M
N
T
I
D
F
G
L
N
P
Q
A
A
L
D
A
P
R
W
Q
-----
W
T
N
G
K
Q
V
Q
V
E
P
T
F
P
V
D
I
A
Q
A
L
V
R
R
G
H
K
I
Q
V
V
L
D
E
G
A
F
G
R
G
Q
I
I
W
R
D
P
T
T
G
V
L
A
G
G
T
E
P
R
T
D
G
Q
V
A
A
W
-
36
HHSearch
99.14
61%
-85
- C4 -
2NLZ
-
?
A:
[9-539]
-------
S
Y
P
Y
P
S
R
R
N
V
V
Y
A
K
N
G
M
V
A
T
S
Q
P
L
A
A
Q
A
G
L
D
I
L
K
A
G
G
N
A
I
D
A
A
I
A
T
A
T
A
L
T
V
L
E
P
T
S
N
G
I
G
S
D
A
F
A
L
V
-
W
-
T
K
-
G
K
L
H
G
---
L
N
G
S
G
R
A
P
M
------
S
L
T
M
E
A
V
---
K
A
K
G
Y--
E
Q
E
-
L
P
P
Y
---
G
-
V
I
P
V
T
V
P
G
A
P
G
A
W
A
E
L
A
K
M
Y
G
N
L
P
L
A
A
S
L
A
P
A
I
R
Y
A
E
E
G
Y
P
V
T
P
T
L
A
K
Y
W
K
A
A
Y
D
-
R
V
K
T
E
-
W
T
D
D
V
Y
Q
P
W
F
D
T
F
A
P
K
-
G
R
A
P
R
V
G
E
V
W
R
S
Q
G
H
A
D
T
L
R
S
I
A
E
S
N
G
E
S
F
Y
R
G
E
L
A
D
Q
I
H
A
F
F
D
K
H
G
G
Y
L
T
K
E
D
L
A
C
Y
R
P
E
W
V
E
P
I
S
I
D
Y
R
G
Y
R
V
W
E
I
-
P
P
N
G
-
Q
G
L
V
A
L
E
-
A
L
N
I
V
K
G
F
E
-----
F
Y
H
--
K
--
D
T
V
D
T
Y
H
K
-
Q
I
--
E
A
M
K
L
--
A
F
V
D
G
M
K
Y
V
T
E
P
S
D
M
S
V
S
V
E
Q
L
L
S
D
E
Y
A
T
E
R
R
K
E
I
G
E
Q
A
L
T
P
E
P
G
T
P
----
T
V
Y
L
A
T
A
D
G
D
G
N
M
V
S
F
I
Q
S
N
Y
M
G
F
G
S
G
V
V
V
P
G
T
G
I
A
M
Q
N
R
G
H
N
F
S
L
D
P
N
H
D
N
A
L
K
P
G
K
R
T
Y
H
T
I
I
P
G
F
L
T
K
N
D
Q
P
I
G
P
F
G
V
M
G
G
F
M
Q
P
Q
G
H
M
Q
V
M
M
N
T
I
D
F
G
L
N
P
Q
A
A
L
D
A
P
R
W
Q
-----
W
T
N
G
K
Q
V
Q
V
E
P
T
F
P
V
D
I
A
Q
A
L
V
R
R
G
H
K
I
Q
V
V
L
D
E
G
A
F
G
R
G
Q
I
I
W
R
D
P
T
T
G
V
L
A
G
G
T
E
P
R
T
D
G
Q
V
A
A
W
-
54
Fugue
77.23
32%
-62
- C4 -
2I3O
-
?
D:
[2-516]
-----------
F
R
S
R
P
N
A
L
S
Q
R
S
V
I
A
S
S
S
E
L
A
S
L
A
G
R
D
I
L
K
R
G
G
N
I
F
D
A
A
L
A
V
S
A
-
L
C
V
T
Q
N
N
L
C
G
L
G
G
D
L
F
A
L
I
-
R
-
D
E
-
N
G
Q
I
D
---
L
N
G
S
G
Q
A
S
R
------
A
V
S
I
D
Y
Y
---
E
S
-
G
---
L
T
K
-
I
P
E
R
---
G
P
Y
A
A
I
T
V
P
G
I
A
G
S
W
D
E
I
F
R
K
F
A
T
-
D
I
A
D
I
L
E
P
A
I
R
T
A
S
A
G
F
P
I
T
----
Q
N
Y
S
D
S
I
A
-
R
S
A
P
V
I
G
Q
Y
R
G
W
S
S
I
F
P
----
N
-
G
S
V
P
V
A
G
E
I
L
K
Q
P
D
L
A
E
S
F
R
-
L
S
E
E
G
F
R
S
F
Y
D
G
S
L
A
D
I
I
I
A
G
L
E
G
T
G
S
P
L
S
D
R
D
L
R
V
Y
R
P
L
I
G
K
P
V
F
T
D
L
D
E
F
R
I
Y
E
T
-
S
P
N
S
-
Q
G
---
I
T
-
V
I
E
W
I
R
G
E
S
-----
H
G
Y
--
D
----
S
R
T
W
E
A
-
K
I
--
E
D
I
F
E
TE
E
A
Y
D
K
R
R
K
I
T
D
P
S
Y
------
N
I
A
Q
H
D
S
A
N
G
K
G
L
--------
P
K
R
D
H
N
D
I
G
D
T
T
Y
F
S
I
S
D
S
E
G
R
S
V
S
I
I
Q
S
N
Y
-
G
F
G
S
G
I
V
P
K
G
T
G
F
V
L
Q
N
R
G
S
Y
F
T
L
Q
R
D
H
P
N
A
L
-
P
G
K
R
T
F
H
T
L
-
A
A
C
V
E
K
E
H
D
L
Y
A
S
L
G
S
-
G
G
D
I
Q
P
Q
--
V
Q
Q
I
L
E
I
L
K
D
N
T
D
P
Q
A
I
L
D
K
P
R
W
T
EPYTI
Y
E
A
P
G
A
V
Y
V
E
S
E
E
L
Y
R
N
V
S
K
Q
I
S
-
G
R
K
V
V
L
R
D
V
S
Q
E
F
G
T
A
Q
I
T
T
L
I
-
R
G
D
V
V
V
G
A
A
D
P
R
G
D
G
I
A
I
P
Y
S
22
PsiBlast_CBE
66.75
32%
-82
- C4 -
2Z8K
1
GGT_ECOLI
C:
[19-357]
----------------
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
-
S
K
N
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
LDD
Q
G
N
P
---
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
----
Y
G
S
E
V
L
P
N
H
E
N
S
K
A
I
---
F
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
-
S
G
G
I
H
I
V
Q
I
L
N
I
L
E
N
F
D
MKKYG
F
G
S
--
A
--
D
A
M
Q
I
M
----
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
-
S
E
I
R
P
G
K
L
A
P
Y
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
66.69
32%
-80
- C4 -
2Z8J
1
GGT_ECOLI
A:
[19-357]
----------------
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
-
S
K
N
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
LDD
Q
G
N
P
---
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
----
Y
G
S
E
V
L
P
N
H
E
N
S
K
A
I
---
F
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
-
S
G
G
I
H
I
V
Q
I
L
N
I
L
E
N
F
D
MKKYG
F
G
S
--
A
--
D
A
M
Q
I
M
----
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
-
S
E
I
R
P
G
K
L
A
P
Y
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
66.50
32%
-80
- C4 -
2Z8K
1
GGT_ECOLI
A:
[19-357]
----------------
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
-
S
K
N
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
LDD
Q
G
N
P
---
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
----
Y
G
S
E
V
L
P
N
H
E
N
S
K
A
I
---
F
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
-
S
G
G
I
H
I
V
Q
I
L
N
I
L
E
N
F
D
MKKYG
F
G
S
--
A
--
D
A
M
Q
I
M
----
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
-
S
E
I
R
P
G
K
L
A
P
Y
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
66.02
32%
-81
- C4 -
2Z8I
1
?
A:
[19-357]
----------------
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
-
S
K
N
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
LDD
Q
G
N
P
---
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
----
Y
G
S
E
V
L
P
N
H
E
N
S
K
A
I
---
F
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
-
S
G
G
I
H
I
V
Q
I
L
N
I
L
E
N
F
D
MKKYG
F
G
S
--
A
--
D
A
M
Q
I
M
----
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
-
S
E
I
R
P
G
K
L
A
P
Y
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
PsiBlast_CBE
65.95
32%
-82
- C4 -
2Z8I
1
?
C:
[19-357]
----------------
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
-
S
K
N
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
LDD
Q
G
N
P
---
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
----
Y
G
S
E
V
L
P
N
H
E
N
S
K
A
I
---
F
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
-
S
G
G
I
H
I
V
Q
I
L
N
I
L
E
N
F
D
MKKYG
F
G
S
--
A
--
D
A
M
Q
I
M
----
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
-
S
E
I
R
P
G
K
L
A
P
Y
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
65.79
31%
-81
- C4 -
2E0X
-
?
A:
[19-357]
----------------
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
-
S
K
N
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
LDD
Q
G
N
P
---
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
Y
G
S
-
E
V
---
L
P
N
H
E
N
S
K
A
I
F
---
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
-
S
G
G
I
H
I
V
Q
I
L
N
I
L
E
N
F
D
MKKYG
F
G
S
--
A
--
D
A
M
Q
I
----
M
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
-
S
E
I
R
P
G
K
L
A
P
Y
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
65.79
31%
-81
- C4 -
2DBX
2
GGT_ECOLI
A:
[19-357]
----------------
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
-
S
K
N
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
LDD
Q
G
N
P
---
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
Y
G
S
-
E
V
---
L
P
N
H
E
N
S
K
A
I
F
---
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
-
S
G
G
I
H
I
V
Q
I
L
N
I
L
E
N
F
D
MKKYG
F
G
S
--
A
--
D
A
M
Q
I
----
M
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
-
S
E
I
R
P
G
K
L
A
P
Y
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
65.62
31%
-80
- C4 -
2DG5
2
?
A:
[19-357]
----------------
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
-
S
K
N
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
LDD
Q
G
N
P
---
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
Y
G
S
-
E
V
---
L
P
N
H
E
N
S
K
A
I
F
---
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
-
S
G
G
I
H
I
V
Q
I
L
N
I
L
E
N
F
D
MKKYG
F
G
S
--
A
--
D
A
M
Q
I
----
M
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
-
S
E
I
R
P
G
K
L
A
P
Y
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
HHSearch
65.39
28%
-81
- C4 -
2QMC
1
?
A:
[30-356]
----------------
I
K
N
T
K
V
G
L
A
L
S
S
H
P
L
A
S
E
I
G
Q
K
V
L
E
E
G
G
N
A
I
D
A
A
V
A
I
G
F
A
L
A
V
V
H
P
A
A
G
N
I
G
G
G
G
F
A
V
I
-
H
L
A
N
-
G
E
N
V
A
---
L
D
F
R
E
K
A
P
L
------
K
A
T
K
N
M
F
---
L
D
K
Q
GNV
V
P
K
-
L
S
E
D
---
G
-
Y
L
A
A
G
V
P
G
T
V
A
G
M
E
A
M
L
K
K
Y
G
T
K
K
L
S
Q
L
I
D
P
A
I
K
L
A
E
N
G
Y
A
I
S
Q
R
Q
A
E
T
L
K
E
A
R
E
-
R
F
L
-------
K
Y
S
S
S
K
K
Y
F
F
K
K
G
H
L
D
Y
Q
E
G
D
L
F
V
Q
K
D
L
A
K
T
L
N
Q
I
K
T
L
G
A
K
G
F
Y
Q
G
Q
V
A
E
L
I
E
K
D
M
K
K
N
G
G
I
I
T
K
E
D
L
A
S
Y
N
V
K
W
R
K
P
V
V
G
S
Y
R
G
Y
K
I
I
S
M
-
S
P
P
S
S
G
G
T
H
L
I
Q
-
I
L
N
V
M
E
N
A
D
-----
L
S
A
--
L
GY
G
A
S
K
N
I
H
I
-
A
A
--
E
A
M
R
Q
--
A
Y
A
D
R
S
V
Y
M
G
D
A
D
F
V
S
V
P
V
D
K
L
I
N
K
A
Y
A
K
K
I
F
D
T
I
Q
P
D
T
V
T
P
S
S
Q
I
K
P
G
M
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
PsiBlast_CBE
65.38
32%
-84
- C4 -
2Z8J
1
?
C:
[19-357]
----------------
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
-
S
K
N
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
LDD
Q
G
N
P
---
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
----
Y
G
S
E
V
L
P
N
H
E
N
S
K
A
I
---
F
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
-
S
G
G
I
H
I
V
Q
I
L
N
I
L
E
N
F
D
MKKYG
F
G
S
--
A
--
D
A
M
Q
I
M
----
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
-
S
E
I
R
P
G
K
L
A
P
Y
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
65.32
29%
-77
- C4 -
2QMC
1
?
A:
[32-368]
------------------
N
T
K
V
G
L
A
L
S
S
H
P
L
A
S
E
I
G
Q
K
V
L
E
E
G
G
N
A
I
D
A
A
V
A
I
G
F
A
L
A
V
V
H
P
A
A
G
N
I
G
G
G
G
F
A
V
I
H
L
-
A
N
-
G
E
N
V
A
---
L
D
F
R
E
K
A
P
L
------
K
A
T
K
N
M
F
---
L
D
K
Q
---
G
N
V
-
V
P
K
L
SED
G
-
Y
L
A
A
G
V
P
G
T
V
A
G
M
E
A
M
L
K
K
Y
G
T
K
K
L
S
Q
L
I
D
P
A
I
K
L
A
E
N
G
Y
A
I
S
Q
R
Q
A
E
T
L
K
E
A
R
E
-
R
F
---
L
K
Y
S
S
S
K
K
Y
F
F
K
K
G
H
L
D
----
Y
Q
E
G
D
L
F
V
Q
K
D
L
A
K
T
L
N
Q
I
K
T
L
G
A
K
G
F
Y
Q
G
Q
V
A
E
L
I
E
K
D
M
K
K
N
G
G
I
I
T
K
E
D
L
A
S
Y
N
V
K
W
R
K
P
V
V
G
S
Y
R
G
Y
K
I
I
S
M
S
P
P
S
S
-
G
G
T
H
L
I
Q
-
I
L
N
V
M
E
N
A
D
-----
L
S
A
LG
Y
--
G
A
S
K
N
I
H
I
-
A
A
--
E
A
M
R
Q
--
A
Y
A
D
R
S
V
Y
M
G
D
A
D
F
V
S
V
P
V
D
K
L
I
N
K
A
Y
A
K
K
I
F
D
T
I
Q
P
D
T
V
T
P
S
-
S
Q
I
K
P
G
M
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
65.30
29%
-75
- C4 -
3FNM
1
?
A:
[32-368]
------------------
N
T
K
V
G
L
A
L
S
S
H
P
L
A
S
E
I
G
Q
K
V
L
E
E
G
G
N
A
I
D
A
A
V
A
I
G
F
A
L
A
V
V
H
P
A
A
G
N
I
G
G
G
G
F
A
V
I
H
L
-
A
N
-
G
E
N
V
A
---
L
D
F
R
E
K
A
P
L
------
K
A
T
K
N
M
F
---
L
D
K
Q
---
G
N
V
-
V
P
K
L
SED
G
-
Y
L
A
A
G
V
P
G
T
V
A
G
M
E
A
M
L
K
K
Y
G
T
K
K
L
S
Q
L
I
D
P
A
I
K
L
A
E
N
G
Y
A
I
S
Q
R
Q
A
E
T
L
K
E
A
R
E
-
R
F
---
L
K
Y
S
S
S
K
K
Y
F
F
K
K
G
H
L
D
----
Y
Q
E
G
D
L
F
V
Q
K
D
L
A
K
T
L
N
Q
I
K
T
L
G
A
K
G
F
Y
Q
G
Q
V
A
E
L
I
E
K
D
M
K
K
N
G
G
I
I
T
K
E
D
L
A
S
Y
N
V
K
W
R
K
P
V
V
G
S
Y
R
G
Y
K
I
I
S
M
S
P
P
S
S
-
G
G
T
H
L
I
Q
-
I
L
N
V
M
E
N
A
D
-----
L
S
A
LG
Y
--
G
A
S
K
N
I
H
I
-
A
A
--
E
A
M
R
Q
--
A
Y
A
D
R
S
V
Y
M
G
D
A
D
F
V
S
V
P
V
D
K
L
I
N
K
A
Y
A
K
K
I
F
D
T
I
Q
P
D
T
V
T
P
S
-
S
Q
I
K
P
G
M
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
65.17
31%
-80
- C4 -
2DBW
2
?
A:
[19-357]
----------------
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
-
S
K
N
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
LDD
Q
G
N
P
---
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
Y
G
S
-
E
V
---
L
P
N
H
E
N
S
K
A
I
F
---
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
-
S
G
G
I
H
I
V
Q
I
L
N
I
L
E
N
F
D
MKKYG
F
G
S
--
A
--
D
A
M
Q
I
----
M
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
-
S
E
I
R
P
G
K
L
A
P
Y
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
64.96
33%
-80
- C4 -
3WHR
-
?
A:
[61-393]
--------------------
K
D
G
M
V
A
T
A
H
P
L
A
S
E
I
G
A
D
V
L
K
K
G
G
N
A
I
D
A
A
V
A
I
Q
F
A
L
N
V
T
E
P
M
M
S
G
I
G
G
G
G
F
M
M
V
-
Y
-
D
--
G
K
T
K
D
T
T
I
I
D
S
R
E
R
A
P
A
GATPDM
F
L
D
E
N
G
K
---
A
I
P
F
---
S
E
R
-
V
T
-----
K
-
G
T
A
V
G
V
P
G
T
L
K
G
L
E
E
A
L
D
K
W
G
T
R
S
M
K
Q
L
I
T
P
S
I
K
L
A
E
K
G
F
P
I
D
S
V
L
A
E
----
A
I
S
-
D
Y
Q
E
K
L
S
R
----
T
A
A
K
D
V
F
L
P
N
-
G
E
P
L
K
E
G
D
T
L
I
Q
K
D
L
A
K
T
F
K
L
I
R
S
K
G
T
D
A
F
Y
K
G
K
F
A
K
T
L
S
D
T
V
Q
D
F
G
G
S
M
T
E
K
D
L
E
N
Y
D
I
T
I
D
E
P
I
W
G
D
Y
Q
G
Y
Q
I
A
T
T
P
P
P
S
S
-
G
G
I
F
L
L
Q
-
M
L
K
I
L
D
H
F
N
-----
L
S
Q
--
Y
--
D
V
-
R
S
W
E
K
Y
Q
L
L
A
E
T
M
H
L
--
S
Y
A
D
R
A
S
Y
A
G
D
P
E
F
V
N
V
P
L
K
G
L
L
H
P
D
Y
I
K
E
R
Q
Q
L
I
N
---
L
D
Q
V
N
K
K
P
K
A
G
D
P
W
K
Y
Q
E
G
S
A
N
Y
K
Q
V
E
Q
P
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
64.91
29%
-76
- C4 -
2QM6
1
?
A:
[32-368]
------------------
N
T
K
V
G
L
A
L
S
S
H
P
L
A
S
E
I
G
Q
K
V
L
E
E
G
G
N
A
I
D
A
A
V
A
I
G
F
A
L
A
V
V
H
P
A
A
G
N
I
G
G
G
G
F
A
V
I
H
L
-
A
N
-
G
E
N
V
A
---
L
D
F
R
E
K
A
P
L
------
K
A
T
K
N
M
F
---
L
D
K
Q
---
G
N
V
-
V
P
K
L
SED
G
-
Y
L
A
A
G
V
P
G
T
V
A
G
M
E
A
M
L
K
K
Y
G
T
K
K
L
S
Q
L
I
D
P
A
I
K
L
A
E
N
G
Y
A
I
S
Q
R
Q
A
E
T
L
K
E
A
R
E
-
R
F
---
L
K
Y
S
S
S
K
K
Y
F
F
K
K
G
H
L
D
----
Y
Q
E
G
D
L
F
V
Q
K
D
L
A
K
T
L
N
Q
I
K
T
L
G
A
K
G
F
Y
Q
G
Q
V
A
E
L
I
E
K
D
M
K
K
N
G
G
I
I
T
K
E
D
L
A
S
Y
N
V
K
W
R
K
P
V
V
G
S
Y
R
G
Y
K
I
I
S
M
S
P
P
S
S
-
G
G
T
H
L
I
Q
-
I
L
N
V
M
E
N
A
D
-----
L
S
A
LG
Y
--
G
A
S
K
N
I
H
I
-
A
A
--
E
A
M
R
Q
--
A
Y
A
D
R
S
V
Y
M
G
D
A
D
F
V
S
V
P
V
D
K
L
I
N
K
A
Y
A
K
K
I
F
D
T
I
Q
P
D
T
V
T
P
S
-
S
Q
I
K
P
G
M
G
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
HHSearch
64.82
31%
-84
- C4 -
2DG5
2
?
A:
[15-345]
------------
D
V
F
H
P
V
R
A
K
Q
G
M
V
A
S
V
D
A
T
A
T
Q
V
G
V
D
I
L
K
E
G
G
N
A
V
D
A
A
V
A
V
G
Y
A
L
A
V
T
H
P
Q
A
G
N
L
G
G
G
G
F
M
L
I
-
R
S
K
N
-
G
N
T
T
A
---
I
D
F
R
E
M
A
P
A
------
K
A
T
R
D
M
F
---
L
D
D
Q
GNP
D
S
K
-
K
S
L
T
---
S
-
H
L
A
S
G
T
P
G
T
V
A
G
F
S
L
A
L
D
K
Y
G
T
M
P
L
N
K
V
V
Q
P
A
F
K
L
A
R
D
G
F
I
V
N
D
A
L
A
D
D
L
K
T
Y
G
S
E
V
L
P
-------
N
H
E
N
S
K
A
I
F
W
K
E
-
G
E
P
L
K
K
G
D
T
L
V
Q
A
N
L
A
K
S
L
E
M
I
A
E
N
G
P
D
E
F
Y
K
G
T
I
A
E
Q
I
A
Q
E
M
Q
K
N
G
G
L
I
T
K
E
D
L
A
A
Y
K
A
V
E
R
T
P
I
S
G
D
Y
R
G
Y
Q
V
Y
S
M
-
P
P
P
S
S
G
G
I
H
I
V
Q
-
I
L
N
I
L
E
N
F
D
-----
M
K
K
--
Y
GF
G
S
A
D
A
M
Q
I
-
M
A
--
E
A
E
K
Y
--
A
Y
A
D
R
S
E
Y
L
G
D
P
D
F
V
K
V
P
W
Q
A
L
T
N
K
A
Y
A
K
S
I
A
D
Q
I
D
I
N
K
A
K
P
S
S
E
I
R
P
G
K
L
A
P
Y
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
64.46
29%
-76
- C4 -
2NQO
-
?
A:
[34-370]
------------------
N
T
K
V
G
L
A
L
S
S
H
P
L
A
S
E
I
G
Q
K
V
L
E
E
G
G
N
A
I
D
A
A
V
A
I
G
F
A
L
A
V
V
H
P
A
A
G
N
I
G
G
G
G
F
A
V
I
H
L
-
A
N
-
G
E
N
V
A
---
L
D
F
R
E
K
A
P
L
------
K
A
T
K
N
M
F
---
L
D
K
Q
---
G
N
V
-
V
P
K
L
SED
G
-
Y
L
A
A
G
V
P
G
T
V
A
G
M
E
A
M
L
K
K
Y
G
T
K
K
L
S
Q
L
I
D
P
A
I
K
L
A
E
N
G
Y
A
I
S
Q
R
Q
A
E
T
L
K
E
A
R
E
-
R
F
---
L
K
Y
S
S
S
K
K
Y
F
F
K
K
G
H
L
D
----
Y
Q
E
G
D
L
F
V
Q
K
D
L
A
K
T
L
N
Q
I
K
T
L
G
A
K
G
F
Y
Q
G
Q
V
A
E
L
I
E
K
D
M
K
K
N
G
G
I
I
T
K
E
D
L
A
S
Y
N
V
K
W
R
K
P
V
V
G
S
Y
R
G
Y
K
I
I
S
M
S
P
P
S
S
-
G
G
T
H
L
I
Q
-
I
L
N
V
M
E
N
A
D
-----
L
S
A
LG
Y
--
G
A
S
K
N
I
H
I
-
A
A
--
E
A
M
R
Q
--
A
Y
A
D
R
S
V
Y
M
G
D
A
D
F
V
S
V
P
V
D
K
L
I
N
K
A
Y
A
K
K
I
F
D
T
I
Q
P
D
T
V
T
P
S
-
S
Q
I
K
P
G
M
G
Q
L
H
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------