@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA0169: (2015-12-24 )
MRLERIARISDGFQSMAREQNLSLSERYHKQLRRLEKVARISDRYQQMMRDLNLALKEASIRDPLTGLPNRRMLLERLREENERSQRHGQSYVLAMLDVDFFKQVNDTWGHDSGDRVLVEIARAMESELREYDLCGRWGGEEFLLLLPQTRLQDAGPVLERVRDSVRTLAVRVGTEALSVTASVGVTEHRIGETYSQTVNRADAALLDAKRSGRDKCVFAALPPLPAPSRPAPAR

Atome Classification :

(20 SA) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20........30----.....--...40........50-........60.--------.......70........80........90........100.......110.......120...-....-130.......140......-----.150.......160......--.170----..--......180.....-.---.-190---........200.......210.......220.......230...
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRLERIARISDGFQSMAREQNLSLSERYHKQ----LRRLE--KVARISDRYQQMMRD-LNLALKEASIR--------DPLTGLPNRRMLLERLREENERSQRHGQSYVLAMLDVDFFKQVNDTWGHDSGDRVLVEIARAM-ESEL-REYDLCGRWGGEEFLLLLP-----QTRLQDAGPVLERVRDSVRT--LAV-----RV--GTEALSVTASVGVT-E---H-R-I---GETYSQTVNRADAALLDAKRSGRDKCVFAALPPLPAPSRPAPAR
23 PsiBlast_CBE 93.3039% -89 - C8 -2WB4 PLED_CAUCN B:[261-453] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSARVKTQ----IQR----------KRYTDYLRNNLDHSL-ELAVT--------DQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRL-ASNV-RAIDLPCRYGGEEFVVIMP-----DTALADALRIAERIRMHVSGSPFTV-----AH--GREMLNVTISIGVS-A---T-A-GE--GDTPEALLKRADEGVYQAKASGRNAVVGKAA-------------
3 PsiBlast_PDB 92.3739% -90 - C8 -2WB4 PLED_CAUCN A:[261-453] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSARVKTQ----IQR----------KRYTDYLRNNLDHSL-ELAVT--------DQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRL-ASNV-RAIDLPCRYGGEEFVVIMP-----DTALADALRIAERIRMHVSGSPFTV-----AH--GREMLNVTISIGVS-A---T-A-GE--GDTPEALLKRADEGVYQAKASGRNAVVGKAAHHHHH--------
2 PsiBlast_PDB 91.7739% -89 - C8 -2V0N PLED_CAUCN A:[260-452] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSARVKTQ----IQR----------KRYTDYLRNNLDHSL-ELAVT--------DQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRL-ASNV-RAIDLPCRYGGEEFVVIMP-----DTALADALRIAERIRMHVSGSPFTV-----AH--GREMLNVTISIGVS-A---T-A-GE--GDTPEALLKRADEGVYQAKASGRNAVVGKAAHHHHHH-------
22 PsiBlast_CBE 91.4339% -88 - C8 -1W25 PLED_CAUCN B:[260-452] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSARVKTQ----IQR----------KRYTDYLRNNLDHSL-ELAVT--------DQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRL-ASNV-RAIDLPCRYGGEEFVVIMP-----DTALADALRIAERIRMHVSGSPFTV-----AH--GREMLNVTISIGVS-A---T-A-GE--GDTPEALLKRADEGVYQAKASGRNAVVGKAAH------------
21 PsiBlast_CBE 90.3539% -91 - C8 -2V0N PLED_CAUCN B:[260-452] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSARVKTQ----IQR----------KRYTDYLRNNLDHSL-ELAVT--------DQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRL-ASNV-RAIDLPCRYGGEEFVVIMP-----DTALADALRIAERIRMHVSGSPFTV-----AH--GREMLNVTISIGVS-A---T-A-GE--GDTPEALLKRADEGVYQAKASGRNAVVGKAAH------------
8 PsiBlast_PDB 90.3034% -72 - C8 -3I5A ? A:[116-331] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYLVKLPDNIELVARIRYHSRS--YMTL----LQRDEAYRALRVS---QQQLLD-TNLVLQRLMNS--------DGLTGLSNRRHFDEYLELEWRRATRDQAQLSLLMIDVDYFKAYNDNFGHLEGDEALRQVAKAI-RNSCSRPSDLPARYGGEEFAMVLP-----NTSPGGARLLAEKLRQSVAG--MNIPHIA-PV--PGSSLTVSIGVATV-T---P-Q-V---GQHSRQLILDADKGLYLAKNNGRNQVAAG---------------
1 PsiBlast_PDB 90.1339% -88 - C8 -1W25 PLED_CAUCN A:[260-452] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSARVKTQ----IQR----------KRYTDYLRNNLDHSL-ELAVT--------DQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRL-ASNV-RAIDLPCRYGGEEFVVIMP-----DTALADALRIAERIRMHVSGSPFTV-----AH--GREMLNVTISIGVS-A---T-A-GE--GDTPEALLKRADEGVYQAKASGRNAVVGKAAH------------
52 Fugue 90.1033% -74 - C8 -1W25 PLED_CAUCN A:[1-454] SARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAELGVEHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQEL----SARVK--TQIQRKRYTDYLRNN-LD-HSLELAVT--------DQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRL-ASNV-RAIDLPCRYGGEEFVVIMP-----DTALADALRIAERIRMHVSG--SPF-----TVAHGREMLNVTISIGVS-A---T-AGE---GDTPEALLKRADEGVYQAKASGRNAVVGKAAH------------
31 HHSearch 88.4538% -89 - C8 -3IGN ? A:[5-170] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKLSMT--------DRLTGLLNRGTWENLVDAEYERFRRYGQATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVT-RNNI-RQSDSAGRYGGEEFGIILP-----ETDAESARVICERIREAIEK--STV-----ST--SAGDIQYTVSMGIA-Q---L-T-ET--PENYMQWMQKADEALYKAKESGRNKVVVSL--------------
37 HHSearch 88.3038% -84 * C8 *3I5C GCN4_YEAST A:[20-196] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EN-EVARLKKLVNS--------DGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAI-REGCSRSSDLAARYGGEEFAMVLP-----GTSPGGARLLAEKVRRTVES--LQI-----SHDQPRPGSHLTVSIGVS-T---L-V-PGGGGQTFRVLIEMADQALYQAKNNGRNQVGLM---------------
4 PsiBlast_PDB 88.0438% -89 - C8 -3IGN ? A:[5-169] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKLSMT--------DRLTGLLNRGTWENLVDAEYERFRRYGQATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVT-RNNI-RQSDSAGRYGGEEFGIILP-----ETDAESARVICERIREAIEK--STV-----ST--SAGDIQYTVSMGIA-QL--T-E-T---PENYMQWMQKADEALYKAKESGRNKVVVSL--------------
28 PsiBlast_CBE 87.6431% -90 - C8 -4H54 YDEH_ECOLI B:[104-286] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAFQEGLLS-FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYL-ASWT-RDYETVYRYGGEEFIIIVK-----AANDEEACRAGVRICQLVDN--HAI-----TH--SEGHINITVTAGVS-R---A-F-P---EEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRVL-----
33 HHSearch 87.1040% -92 - C8 -1W25 PLED_CAUCN A:[282-454] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DHSLELAVT--------DQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRL-ASNV-RAIDLPCRYGGEEFVVIMP-----DTALADALRIAERIRMHVSG--SPF-----TVAHGREMLNVTISIGVS-A---T-A-GE--GDTPEALLKRADEGVYQAKASGRNAVVGKAAH------------
6 PsiBlast_PDB 87.0039% -77 - C8 -3I5C GCN4_YEAST A:[26-196] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKKLVNS--------DGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCS-RSSDLAARYGGEEFAMVLP-----GTSPGGARLLAEKVRRTVES--LQISHDQPRP--GSH---LTVSIGVS-TLVPG-G-G---GQTFRVLIEMADQALYQAKNNGRNQVGLM---------------
11 PsiBlast_PDB 85.7731% -90 - C8 -4H54 YDEH_ECOLI A:[104-286] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAFQEGLLS-FTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYL-ASWT-RDYETVYRYGGEEFIIIVK-----AANDEEACRAGVRICQLVDN--HAI-----TH--SEGHINITVTAGVS-R---A-F-P---EEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV------
24 PsiBlast_CBE 85.6637% -70 - C8 -3BRE ? B:[134-334] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYHSRSYIALQQRD--EAYRALRESQQQLLE-TNLVLQRLMNS--------DGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCS-RSSDLAARYGGEEFAMVLP-----GTSPGGARLLAEKVRRTVES--LQISHDQPRP--GSH---LTVSIGVS-TLVPG-G-G---GQTFRVLIEMADQALYQAKNNGRNQVGLMEQP------------
5 PsiBlast_PDB 85.2437% -74 - C8 -3BRE ? A:[134-334] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYHSRSYIALQQRD--EAYRALRESQQQLLE-TNLVLQRLMNS--------DGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCS-RSSDLAARYGGEEFAMVLP-----GTSPGGARLLAEKVRRTVES--LQISHDQPRP--GSH---LTVSIGVS-TLVPG-G-G---GQTFRVLIEMADQALYQAKNNGRNQVGLMEQ-------------
15 PsiBlast_PDB 84.7936% -99 - C8 -4RNH - ? A:[25-186] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRF------LGHAAGDRMLQEVATRL-SACV-SQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLAR--PFT-----LE--GRE-FFVTASIGVALS---P-Q-D---GAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELE
10 PsiBlast_PDB 83.6236% -98 - C8 -4URG ? A:[2-149] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPLTGLPNRRYFFELGNRYLDLAKREGKKVFVLFVDLAGFKAINDTYGHLSGDEVLKTVSKRI-LDRV-RRSDVVARYGGDEFTILLY-----DMKEEYLKSLLERILSTFRE---PV-----RV--ENKHLSVTPNIGVA-R---FPE-D---GENLEELLKVADMRMYKAKE------------------------
9 PsiBlast_PDB 83.0435% -97 - C8 -4URS ? A:[27-178] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAYH--------DPLTGLPNRRYFFELGNRYLDLAKREGKKVFVLFVDLAGFKAINDTYGHLSGDEVLKTVSKRI-LDRV-RRSDVVARYGGDEFTILLY-----DMKEEYLKSLLERILSTFRE---PV-----RV--ENKHLSVTPNIGVA-R---FPE-D---GENLEELLKVADMRMYKAKEMKVPYFSLS---------------