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(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA0187: (2015-12-25 )
MNLDSKLFDATLDLERVKVSVRTLVKLSRQEQSAIIRTLNEFGFLLLRSEHGEDRQELLALKELFGRAAPHPRADADGIVPISNARYVSGYLGSTPLEHKLHTDGAFLDTPEQLCSLQCVRNAREGGETLLASAGLAFERLRRRMPTKHLGLLRGDALTIVRKHQSSTQPVFRLNGEALGIKFRQNDGAAEVVEHPVAVEAFAELVAALEDPACQLRIKLEPGEILVLDNTAVLHGRTAFCANELREMRRLNFDGHGRLRAELELGFKVGL

Atome Classification :

(20 SA) -------------------------------------------------------------------------------------------------------------.........10.....------------...----------20...-.-....30-----------........40........50.-...------.---------------.----------------------.----------------------.------60---.........--------------70-.-..-.-.-...----.80.--...-------------------...--.90.-........100.......110-........120--..--..-..-..130......----.-------140---.-----.......--150.....-----.----.-------160--.-----------.------------------.-----------------..-------------------------------------..170.-----..----..-..180.----.-.--.-...-------------190..--------------------------------------------.....-----------------------------200.......210--.........220.......230.......240.---.---......250--.--......260.......270---
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------------------------------MNLDSKLFDATLDLER------------VKV----------SVRTL-V-KLSRQE-----------QSAIIRTLNEFGFLLLRSEHG-EDR------Q---------------E----------------------L----------------------L------A----LKELFGRAA--------------P--H-PR-A-D-ADG----IVPI--SNA-------------------RYV--SG-Y-LGSTPLEHKLHTDGAFLDTP--EQLCSLQCV-R--NA--RE-GG-ETLLASAGLAF----E-------RL----R-----RRMPTKH--LGLLRGDA-----L----T-------IVR--K-----------H------------------Q-----------------SS-------------------------------------TQPVFR-----LN----GE-ALGIKF----R-Q--N-DGA-------------AEVVE--------------------------------------------HPVAV-----------------------------EAFAELVAALE----DPACQLRIKLEPGEILVLDNTAVLHGRTAF-CA---N---ELREMRRLN--F--DGHGRLRAELELGFKVGL----
31 HHSearch 90.3921% -44 * C3 *1OTJ TAUD_ECOLI A:[13-282] --------------------------------------------------------------------------------------------------------------------------YIG------------AQI----------SGADL-TRPLSDNQ-----------FEQLYHAVLRHQVVFLRDQA--ITP------Q---------------Q----------------------Q----------------------R------A----LAQRFGELH--------------I--HPVY-P-H-AEG----VDEI--IVL-------------------D-T-----H-NDNPPDNDNWHTDVTFIETP--PAGAILAAK-E--LP--ST-GG-DTLWTSGIAAY----E-------AL----S-----VPFRQLL--SGLRAEHD-----F----RKSFPEYKYRKTEEEHQRWREAVAKN------------------P-----------------PL-------------------------------------LHPVVR-----THPV--SG-KQALFV----N-E--GFTTR-------------IVDVS--------------------------------------------EKESE-----------------------------ALLSFLFAHIT----KPEFQVRWRWQPNDIAIWDNRVTQHYANAD-YL---P---QRRIMHRAT--I--LGDKPFYRA-------------
53 Fugue 88.4123% -49 - C3 -1DS1 CAS1_STRC2 A:[2-324] --------------------------------------------------------------------------------------------TSVDCTAYGPELRALAARLPRTPRADLYAFLDA------------AHT----------AAASL-P-GALATA-----------LDTFNAEGSEDGHLLLRGLPV-EAD------A---------------DLPTTPSSTPAPEDRSLLTMEAML----------------------G------L----VGRRLGLHT--------------G--Y-RE-L-R-SGTVYHDVYPS--PGA-------------------HHL--SS-E-TSETLLE--FHTEMAYHRLQ--PNYVMLACS-R--AD--HE-RTAATLVASVRKAL----P-------LLDERTR-----ARLLDRR--MPCCVDVA-----F----R-------GGV--D-----------D------------------P-----------------GA-------------------------------------IAQVKP-----LY----GD-ADDPFL----G-Y--D-REL-------------LAPED---------------------------------------------PADK-----------------------------EAVAALSKALD----EV--TEAVYLEPGDLLIVDNFRTTHARTPF-SPRWDG---KDRWLHRVY--IRTDRNGQLSGGERAGDVVAFTPRG
55 Fugue 87.9220% -49 - C3 -1GY9 TAUD_ECOLI A:[4-282] --------------------------------------------------------------------------------------------------------------RLSITPLGPYIGAQI------------SGA----------DLTR----PLSDNQ-----------FEQLYHAVLRHQVVFLRDQAI--TP------Q---------------Q----------------------Q----------------------R------A----LAQRFGELH--------------I--H-PV-Y-P-HAE------GV--DEI-------------------IVL--DT-H-NDNPPDNDNWHTDVTFIETP--PAGAILAAK-E--LP--ST-GG-DTLWTSGIAAY----E-------AL----S-----VPFRQLL--SGL---------------R-------AEH--D-----------F------------------R-----------------KS-------------------------------------FPEYKY-----RK----TE-EEHQRW----R-E--A-VAK-------------NPPLL--------------------------------------------HPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHIT----KPEFQVRWRWQPNDIAIWDNRVTQHYANAD-YL---P---QRRIMHRAT--I--LGDKPFYRA-------------
59 Fugue 87.3918% -64 - C3 -1Y0Z Y3136_ARATH A:[4-330] -------------------------------------------------------------------------------------------------------------LLLVETPIPQQKHYES------------KPFPAVISPPPALSLPLF-T-QTIKTQ-----------KHYLDSLLHESGAVLFRGFPV-NSA------D---------------D----------------------F----------------------N------D----VVEAFGFDE--------------L--P-YV-G-G-AAP----RTSV--VGR-------------------VFT--AN-E-SPPDQ-KIPFHHEMAQVREF--PSKLFFYCE-I--EP--KC-GG-ETPIVLSHVVY----E-------RM----K-----DKH-PEF--VQRLEEHG-----L----L-------YVR--V-----------LGEDDDPSSPIGRGWKSTFL-----------------TH-------------------------------------DKNLAE-----QR----AV-DLGMKL----EWT--E-DGG-------------AKTVMGPIPAIKYDESRNRKVWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPA-----------------------------DIVHDCLRILE----EE--CVAVPWQRGDVLLIDNWAVLHSRRPF-D----P---PRRVLASLC--K------------------------
56 Fugue 85.4720% -48 - C3 -1GQW TAUD_ECOLI A:[4-282] --------------------------------------------------------------------------------------------------------------RLSITPLGPYIGAQI------------SGA----------DR------PLSDNQ-----------FEQLYHAVLRHQVVFLR-DQA-ITP------Q---------------Q----------------------Q----------------------R------A----LAQRFGELH--------------I--H-PV-Y-P---H----AEGV--DEI-------------------IVL--DT-H-NDNPPDNDNWHTDVTFIETP--PAGAILAAK-E--LP--ST-GG-DTLWTSGIAAY----E-------AL----S-----VPFRQLL--SGL---------------R-------AEH--D-----------F------------------R-----------------KS-------------------------------------FPEYKY-----RK----TE-EEHQRW----R-E--A-VAK-------------NPPLL--------------------------------------------HPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHIT----KPEFQVRWRWQPNDIAIWDNRVTQHYANAD-YL---P---QRRIMHRAT--I--LGDKPFYRA-------------
32 HHSearch 84.2818% -54 - C3 -1OIH ATSK_PSEPU A:[26-291] -----------------------------------------------------------------------------------------------------------------------------------------AEI----------RGVKL-SPDLDAAT-----------VEAIQAALVRHKVIFFRGQTH-LDD------Q---------------S----------------------Q----------------------E------G----FAKLLGEPV--------------A---------PVVDG----TRYL--LQ----------------------L--D---------RANSWHTDVTFVEAY--PKASILRSV-V--AP--AS-GG-DTVWANTAAAY----Q-------EL----P-----EPLRELA--DKLWAVHS-----N----E------------------------V------------------Y-----------------ET-------------------------------------EHPVVR-----VHPI--SG-ERALQL----G-H--F-VKR-------------IKGYS--------------------------------------------LADSQ-----------------------------HLFAVLQGHVT----RLENTVRWRWEAGDVAIWDNRATQHYAVDD-YG---T---QPRIVRRVT--L--AGEVPVGVDGQLSRTTRK----
36 HHSearch 80.5322% -57 - C3 -1DS1 CAS1_STRC2 A:[48-307] ------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-----------LDTFNAEGSEDGHLLLRGLPV-EAD------A---------------D----------------------LPTTPSSTPAPEDRSLLTMEAMLG------L----VGRRLGLHT--------------G--Y-RE-LRS-GTV----YHDV--YPS-------------------PGA--HH-LSSETSETLLEFHTEMAYHRLQ--PNYVMLACS-R--AD--HERTA-ATLVASVRKAL----P-------LL----D-----ER---TR--ARLLDRRMPCCVDV----A-------FRG--GVD---------DPGA---------------I-----------------AQ-------------------------------------VKPLYG-----D-----AD-DPFLGY----D-R--E-LLA-------------P---E--------------------------------------------DPADK-----------------------------EAVAALSKALD------EVTEAVYLEPGDLLIVDNFRTTHARTPF-SPRWDG---KDRWLHRVY--I--RTDRNGQLSGGERAGDVV----
38 HHSearch 80.2219% -54 - C3 -2WBQ ARGHX_STRVI A:[83-346] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WPHALVVRGNPV-DDAALGSTPVHWRTARTPGSRPLSFL----------------------L----------------------M------L----YAGLLGDVF--------------G--W-ATQQ-D-GRV----VTDV--LPI-------------------KGGEHTL-V-SSSSRQELGWHTEDAFSPYR--ADYVGLLSL-R--NP---D-GV-ATTLAGVP--L----D-------DL------------DERTL--DVLFQERF----------L-------IRP--DD----------SHLQ---------------VNNSGRVEFEGIAQAADRPE-------------------------------------PVAILT-----GH----RA-APHLRV----D-G--D-FSA-------------PA-EG--------------------------------------------DEEAA-----------------------------AALGTLRKLID----A--SLYELVLDQGDVAFIDNRRAVHGRRAF-QPRYDG---RDRWLKRIN--I--TRDLHRSRKAWAGDSRVL----
54 Fugue 79.6618% -55 - C3 -3EAT ? X:[1-293] -------------------------------------------------------------------------------------------------------------GHMNAYLSDQPVRLSPLRDEQGNQPRFGLLL----------EPGRPGM-HVGELP-----------AQWLKGLARSHHLLLLRGFAAFADA------E---------------S----------------------L----------------------T------R----YCHDFGEVM--------------L--W-PF-G-A-VLE----LVEQ--EGA-------------------EDH--------IFANNYVPLHWDGMYLETV--PEFQVFHCV-DAPGD--SD-GG-RTTFSSTPAAL----Q-------LA----D-----SSELELW--RRA----------S----G-------RYQ--R-----------S------------------S-----------------RS-------------------------------------AAPIVE-----RHPRREFP-ILRFCE----P-P--S-EFH-------------YDGIA--------------------------------------------PEQRG-----------------------------ELLASLRRCLY----HPQAHYAHRWRSDDLVIADNLTLLHGREAF-AH---R---APRHLRRVH--I--HAEPALRNPHLQRD--------
57 Fugue 78.9816% -53 - C3 -3MS5 BODG_HUMAN A:[1-385] SMACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDVNIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSELQLPT------------LD-------------FED-V-LRYDEH-----------AYKWLSTLKKVGIVRLTGASD-KPG---------------------------------------------------------------------------E----VSKLGKRMG--------------F--L-YL-T-F-YGH----TWQV--QDK-------------------ID---AN-N-VAYTTGKLSFHTDYPALHHP--PGVQLLHCI-K--QT--VT-GG-DSEIVDGFNVC----Q-------KL----K-----KNNPQAF--QILSSTFV-----D----F-------TDI--GVDYCDF-----S------------------V-----------------QS-------------------------------------KHKIIE-----LDDK--GQ-VVRINFNNATR-D--T-IFD-------------VPVER--------------------------------------------VQPFY-----------------------------AALKEFVDLMN----SKESKFTFKMNPGDVITFDNWRLLHGRRSY--E---A---GTEISRHLEGAY--ADWDVVMSRLRILRQRVE----
58 Fugue 76.6716% -65 - C3 -1NX8 CARC_PECCC A:[2-272] ----------------------------------------------------------------------------------------------------------------SEIVKFNPVMASG------------FGA----------YI-DH-R-DFLEAK-----------TETIKNLLMRQGFVVVK-NLD-IDS------D---------------T----------------------F----------------------R------D----IYSAYGTIV--------------E--Y-RD---------------T--LKL-------------------EGE--KG-K-IVTGRGQLPFHADGGLLLSQVDQVFLYAAEI-K--NV--KF-RG-ATTVCDHALAC----Q-------EM----P-----AHLLRVL--EEE---------------T-------FEV--R-----------V------------------L-----------------WF-------------------------------------KVPVFT-----DL----GW-VRKMLI----Y-F--P-FDE-------------GQPAS--------------------------------------------WEPRIVGFTDHETQ--------------------AFFQELGAFLK----QPRYYYKHFWEDGDLLIMDNRRVIHEREEFNDD---D---IVRRLYRGQ--T--AD--------------------
37 HHSearch 76.1816% -52 - C3 -2Q4A Y3136_ARATH A:[19-328] ------------------------------------------------------------------------------------------------------------------------SKPFP------------AVI----------SPP-------PALSLPLFTQTIKTQKHYLDSLLHESGAVLFRGFPV-NSA------D---------------D----------------------F----------------------N------D----VVEAFGFDE--------------L--PYVG-G-A-A-P----RTSVVGRVF-------------------T-A-----N-ESPPDQKIPFHHEMAQVREF--PSKLFFYCE-I--EP--KC-GG-ETPIVLSHVVY----E-------RM----K-----DKHPEFV--QRLEEHG------L----L-------YVR--V-----------L------------------GEDDDPSSPIG-------RGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIK-----YDES--RN-RKVWFN----S-MVAA-YTGWEDKRNDPRKAVTFG-DG--------------------------------------------KPLPA-----------------------------DIVHDCLRIL------EEECVAVPWQRGDVLLIDNWAVLHSRRPF-DP--------PRRVLASL--C--K---------------------
60 Fugue 75.0817% -34 - C3 -1JR7 CSID_ECOLI A:[1-311] ---------------------------------------------------------------------------------------------------------GQDYSGFTLTPSAQSPRLLE------------LTF----------TEQTT-K-QFLEQV-----------AEWPVQALEYKSFLRFRVAKI-LDD------L---------------C----------------------A----------------------N------Q----LQPLLLKTLLNRAEGALLINAVGV--D-DV-K-Q-ADE----MVKL--ATAVAHLIGRSNFDAMSGQYYARFVVKNV-Y-LRQPHRVMELHNDGTYVEEIT-DYVLMMKID-E--QN--MQ-GG-NSLLLH----L----D-------DW----E-----HLDNYFR--HPLARRPM-----RFAAPP-------SKN--V-----------S------------------K-----------------DV-------------------------------------FHPVFD-----VD----QQGRPVMRY----I-D--Q-FVQ-------------PKDFE--------------------------------------------EGVWL-----------------------------SELSDAIETSK----GI---LSVPVPVGKFLLINNLFWLHGRDRF-TP---H---P--DLRREL--M--RQRGYFAYASNH-YQTHQ----
34 HHSearch 74.3420% -59 - C3 -1JR7 CSID_ECOLI A:[77-299] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEGALLINAVGV--DDVKQA--D---------------E----------------------M----------------------V------KLATAVAHLIGRSN--------------FDAM-SG-Q-Y--YA----RFVV--KNV---------------------------Y-LRQPHRVMELHNDGTYVEEI--TDYVLMMKIDE--QN--MQ-GG-NSLLLHLDDWE----H-------LDN---Y-----FRHP-L-----ARRP-------M----R-------FAA--PPSKNV------S------------------K-----------------DV-------------------------------------FHPVFD-----VDQ---QG-RPVMRY----I-D--Q-FVQ-------------PK-----------------------------------------------DFEEG-----------------------------VWLSELSDAIE----TSKGILSVPVPVGKFLLINNLFWLHGRDRF-TP---HPD-LRRELMRQR--G--YFAYASNHYQTHQ---------
20 PsiBlast_PDB 73.8430% -47 - C3 -1DS1 CAS1_STRC2 A:[123-284] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VYPS--PGA-------------------HHL--SS-E-TSETLLE--FHTEMAYHRLQ--PNYVMLACS-R--AD--HERTA-ATLVASVRKALPLLDE-------RT----RARLLDRRMPCCV--DVAFRGGV-----------------------D-----------D------------------P-----------------GA-------------------------------------IAQVKP-----LY----GD-A-DDPF----L-G--Y-DRE-------------LLAPE--------------------------------------------DPADK-----------------------------EAVAALSKALD----E--VTEAVYLEPGDLLIVDNFRTTHARTPF-SP---R---WDGKDRWLH--R--VYIRTDRNGQLSGGERAG----
35 HHSearch 73.7819% -60 - C3 -2OG5 ASNO_STRCO A:[90-341] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FRRDSGPDGAIVLRGLPV--DS------M---------------G----------------------LPPTPRVNGSVQREAS-------LGAAVLLM----TACGLGDPG--------------A--F-LPEK-N-GAL----VQDV--VPV-------------------PGM--EEFQ-GNAGSTLLTFHNENAFHEHR--PDFVMLLCL-R--AD--PT-GR-AGLRTAC--VR----R-------VL----P-----LLSDSTV--DALWAPEF-----R----T-------APP--PSFQ----------------------------------------------A-------------------------------------PAPVLL-----GD----RS-DPDLRV----D-L--A-ATE----------------PV--------------------------------------------TERAA-----------------------------EALRELQAHFD----A--TAVTHRLLPGELAIVDNRVTVHGRTEF-TP---RYDGTDRWLQRTF--V--LTDLRRSRAMRPADGYVL----
13 PsiBlast_PDB 72.8925% -40 - C3 -4YLM ? X:[111-286] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHWDGMYLETV--PEFQVFHCV-D--APGDSD-GG-RTTFSSTPAAL----QLADSSELEL----W-----RRASGRYQR---SSRSA-----A----P-------IVE--R-----------H------------------P-----------------RR-------------------------------------EFPILRFCEPP--------------------------------------------FHY--------------------------------------------DGIAP-----------------------------EQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAF-AH---R---APRHLRRVH--I--HAEPALRNPHLQR---------
19 PsiBlast_PDB 72.7730% -45 - C3 -1DS0 CAS1_STRC2 A:[123-284] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VYPS--PGA-------------------HHL--SS-E-TSETLLE--FHTEMAYHRLQ--PNYVMLACS-R--AD--HERTA-ATLVASVRKALPLLDE-------RT----RARLLDRRMPCCV--DVAFRGGV-----------------------D-----------D------------------P-----------------GA-------------------------------------IAQVKP-----LY----GD-A-DDPF----L-G--Y-DRE-------------LLAPE--------------------------------------------DPADK-----------------------------EAVAALSKALD----E--VTEAVYLEPGDLLIVDNFRTTHARTPF-SP---R---WDGKDRWLH--R--VYIRTDRNGQLSGGERAG----
17 PsiBlast_PDB 72.4830% -48 - C3 -1DRT CAS1_STRC2 A:[123-284] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VYPS--PGA-------------------HHL--SS-E-TSETLLE--FHTEMAYHRLQ--PNYVMLACS-R--AD--HERTA-ATLVASVRKALPLLDE-------RT----RARLLDRRMPCCV--DVAFR------------------------------------------------------------------------------------------------------------------IAQVKP-----LY----GD-A-DDPF----L-G--Y-DRE-------------LLAPE--------------------------------------------DPADK-----------------------------EAVAALSKALD----E--VTEAVYLEPGDLLIVDNFRTTHARTPF-SP---R---WDGKDRWLH--R--VYIRTDRNGQLSGGERAG----
18 PsiBlast_PDB 72.3830% -45 - C3 -1DRY CAS1_STRC2 A:[123-284] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VYPS--PGA-------------------HHL--SS-E-TSETLLE--FHTEMAYHRLQ--PNYVMLACS-R--AD--HERTA-ATLVASVRKALPLLDE-------RT----RARLLDRRMPCCV--DVAFRG-----------------------------------------------------------------------------------------------------------------IAQVKP-----LY----GD-A-DDPF----L-G--Y-DRE-------------LLAPE--------------------------------------------DPADK-----------------------------EAVAALSKALD----E--VTEAVYLEPGDLLIVDNFRTTHARTPF-SP---R---WDGKDRWLH--R--VYIRTDRNGQLSGGERAG----