@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA0577: (2016-01-10 )
MAGLIPQSFIDDLLNRTDIVEVVSSRIQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYYCFGCGAGGNALGFVMDHDQLEFPQAVEELAKRAGMDVPREERGGRGHTPRQPTDSPLYPLLSAAAEFYKQALKSHPARKAAVNYLKGRGLTGEIARDFGLGFAPPGWDNLLKHLGGDNLQLKAMLDAGLLVENSDTGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARQKNRDLDEIMVVEGYMDVIALAQQGIRNAVATLGTATSEEHIKRLFRLVPSILFCFDGDQAGRKAAWRALESVLPNLQDGKRVRFLFLPEGEDPDSLVRAEGEDAFRARITQQAQPLAEYFFQQLMLEADPATLEGKAHLATLAAPLLEKIPGNNLRLLMRQRLSEITGLSGENIGQLAHHSPPPSSMDHGASGVLDGDDYFAASAYYENEPSHAPFDAAPGYVEAQPRKSWNKDKKPWDGKKWDGKKKWDKGGRGDFKAPQRTPVSVESTTLNALRTLLHHPQLALKVDDAGTLAREQDTYAQLLVSLLEALQKNPRQSSMQLIARWHGTPQGRLLQALGEKEWLIVQENLEKQFFDTITKLSESQRFGEREERLRSVMQKSYSELTDEEKALLREHYSVAASSPSQS
Atome Classification :
(20 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180..-----.....190.......200.......210.......220......-.230........240.......250.......260.......270.......280.......290.......300.......310.......320.......330........340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660..
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MAGLI
P
Q
S
F
I
D
D
L
LN
R
T
D
I
V
E
V
V
S
S
R
I
Q
L
KKTGKNYSACCPFHKEKTP
S
F
TVSPDK
Q
F
Y
Y
C
F
GCGAGGN
A
L
G
F
V
MDHDQLE
F
P
Q
A
V
E
E
L
A
K
RAGMDV
P
R
E
ERGGRGHTPRQPTDS
P
L
Y
P
L
L
S
A
A
A
E
F
Y
K
Q
A
L
K
SHP
A
R
K
A
A
V
N
Y
L
KGRG
L
T
G
E
I
A
R
D
FGLGFAPP
G
W
D
N
L
L
K
H
LGGD
N
L
Q
L
K
A
M
-----LDA
G
L
L
VENSDT
G
K
R
Y
D
R
F
R
D
R
V
M
F
P
IRDSR
G
R
I
I
A
FG
G
R
VLGD-DK-PKYLNSPETPVFHK
G
Q
E
L
Y
G
L
Y
E
A
R
Q
KNR
D
L
D
E
I
M
V
V
E
G
Y
M
D
V
I
A
L
A
Q
Q
G
I
R
N
A
V
A
T
LGTAT
S
E
E
H
I
K
R
L
F
R
L
V
P
S
I
L
F
C
FDGDQA
G
R
K
A
A
W
R
A
L
E
S
VLP-NLQDG
K
R
V
R
F
L
F
LPEGE
D
P
D
S
L
V
RAEG
E
D
A
F
R
A
R
I
T
Q
Q
A
Q
P
L
A
E
Y
F
F
Q
Q
L
M
LEADPATLEGK
A
H
L
A
T
L
A
A
P
L
L
E
KIPG
N
N
L
R
L
L
M
R
Q
R
L
S
E
I
TGLSGE
N
I
G
Q
L
AHHSPPPSSMDHGASGVLDGDD
Y
F
A
A
S
A
YYENEPSHAPFDAAPGYVEAQPRKSWNKDKKPWDGKKWDGKKKWDKGGRGDFKAPQRTPV
S
V
E
S
T
T
L
N
A
L
R
T
L
LHHP
Q
L
A
L
K
VDDAGTLA
R
E
Q
D
T
Y
A
Q
L
L
V
S
L
L
E
A
L
Q
KNP
R
Q
S
S
M
Q
L
I
A
R
WHGTP
Q
G
R
L
L
Q
A
LGEK
E
W
L
I
V
Q
E
N
L
E
K
Q
F
F
D
T
I
T
K
L
S
E
S
Q
RF
G
E
R
E
E
R
L
R
S
V
M
Q
K
S
Y
S
E
LT
D
E
E
K
A
L
L
R
E
H
Y
S
VAASSPSQS
3
PsiBlast_PDB
98.43
55%
-114
- C4 -
3B39
1
DNAG_ECOLI
A:
[9-314]
--------------------------------------------------------------------------------------------------------------------
L
Y
Q
L
M
D
G
L
N
T
F
Y
Q
Q
S
L
Q
-
Q
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
-----
I
D
A
G
M
L
V
T
N
-
D
--
R
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
N
-
D
T
-
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
T
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
W
C
A
L
E
T
A
L
P
-
Y
M
T
D
G
R
Q
L
R
F
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
A
R
M
-
E
Q
A
M
P
L
S
A
F
L
F
N
S
L
M
P
Q
V
D
L
S
T
P
D
G
R
A
R
L
S
T
L
A
L
P
L
I
S
Q
V
P
G
E
T
L
R
I
Y
L
R
Q
E
L
G
N
K
L
G
I
L
D
D
S
Q
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48
Fugue
97.89
54%
-111
- C4 -
1DD9
1
DNAG_ECOLI
A:
[20-333]
-------------------------------------------------------------------------------------------------------------------
T
L
Y
Q
L
M
D
G
L
N
T
F
Y
Q
Q
S
L
Q
Q
-
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
-----
I
D
A
G
M
L
V
T
----
N
R
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
N
-
D
T
-
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
S
T
T
-
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
W
R
A
L
E
T
A
L
P
-
Y
M
T
D
G
R
Q
L
R
F
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
A
R
M
-
E
Q
A
M
P
L
S
A
F
L
F
N
S
L
M
P
Q
V
D
L
S
T
P
D
G
R
A
R
L
S
T
L
A
L
P
L
I
S
Q
V
P
G
E
T
L
R
I
Y
L
R
Q
E
L
G
N
K
L
G
I
L
D
D
S
Q
L
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_CBE
97.30
55%
-112
- C4 -
3B39
1
DNAG_ECOLI
B:
[9-311]
--------------------------------------------------------------------------------------------------------------------
L
Y
Q
L
M
D
G
L
N
T
F
Y
Q
Q
S
L
Q
-
Q
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
-----
I
D
A
G
M
L
V
T
N
-
D
Q
G
R
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
N
-
D
T
-
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
T
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
W
C
A
L
E
T
A
L
P
-
Y
M
T
D
G
R
Q
L
R
F
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
A
R
M
-
E
Q
A
M
P
L
S
A
F
L
F
N
S
L
M
P
Q
V
D
L
S
T
P
D
G
R
A
R
L
S
T
L
A
L
P
L
I
S
Q
V
P
G
E
T
L
R
I
Y
L
R
Q
E
L
G
N
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
97.21
54%
-110
- C4 -
1DD9
1
DNAG_ECOLI
A:
[20-330]
-------------------------------------------------------------------------------------------------------------------
T
L
Y
Q
L
M
D
G
L
N
T
F
Y
Q
Q
S
L
Q
Q
-
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
-----
I
D
A
G
M
L
V
T
N
----
R
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
N
-
D
T
-
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
-
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
W
R
A
L
E
T
A
L
P
-
Y
M
T
D
G
R
Q
L
R
F
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
A
R
M
E
-
Q
A
M
P
L
S
A
F
L
F
N
S
L
M
P
Q
V
D
L
S
T
P
D
G
R
A
R
L
S
T
L
A
L
P
L
I
S
Q
V
P
G
E
T
L
R
I
Y
L
R
Q
E
L
G
N
K
L
G
I
L
D
D
S
Q
L
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
97.08
55%
-113
- C4 -
1DD9
1
DNAG_ECOLI
A:
[21-326]
--------------------------------------------------------------------------------------------------------------------
L
Y
Q
L
M
D
G
L
N
T
F
Y
Q
Q
S
L
Q
-
Q
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
-----
I
D
A
G
M
L
V
T
N
----
R
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
N
-
D
T
-
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
-
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
W
R
A
L
E
T
A
L
P
-
Y
M
T
D
G
R
Q
L
R
F
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
A
R
M
-
E
Q
A
M
P
L
S
A
F
L
F
N
S
L
M
P
Q
V
D
L
S
T
P
D
G
R
A
R
L
S
T
L
A
L
P
L
I
S
Q
V
P
G
E
T
L
R
I
Y
L
R
Q
E
L
G
N
K
L
G
I
L
D
D
S
Q
L
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
97.03
55%
-111
- C4 -
1DDE
4
DNAG_ECOLI
A:
[21-326]
--------------------------------------------------------------------------------------------------------------------
L
Y
Q
L
M
D
G
L
N
T
F
Y
Q
Q
S
L
Q
-
Q
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
-----
I
D
A
G
M
L
V
T
N
----
R
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
N
-
D
T
-
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
T
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
W
R
A
L
E
T
A
L
P
-
Y
M
T
D
G
R
Q
L
R
F
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
A
R
M
-
E
Q
A
M
P
L
S
A
F
L
F
N
S
L
M
P
Q
V
D
L
S
T
P
D
G
R
A
R
L
S
T
L
A
L
P
L
I
S
Q
V
P
G
E
T
L
R
I
Y
L
R
Q
E
L
G
N
K
L
G
I
L
D
D
S
Q
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
89.48
36%
-84
* C4 *
2AU3
1
DNAG_AQUAE
A:
[3-405]
-----
M
S
S
D
I
D
E
L
R
R
E
I
D
I
V
D
V
I
S
E
Y
L
N
L
E
K
V
G
S
N
Y
R
T
N
C
P
F
H
P
D
D
T
P
S
F
Y
V
S
P
S
K
Q
I
F
K
C
F
G
C
G
V
G
G
D
A
I
K
F
V
S
L
Y
E
D
I
S
Y
F
E
A
A
L
E
L
A
K
R
Y
G
K
K
L
D
L
E
K
I
S
---------
K
D
E
K
V
Y
V
A
L
D
R
V
C
D
F
Y
R
E
S
L
L
K
---
N
R
E
A
S
E
Y
V
K
S
R
G
I
D
P
K
V
A
R
K
F
D
L
G
Y
A
P
S
S
-
E
A
L
V
K
V
L
K
E
N
D
L
L
E
A
Y
L
-----
E
T
K
N
L
L
S
P
T
--
K
G
V
Y
R
D
L
F
L
R
R
V
V
I
P
I
K
D
P
R
G
R
V
I
G
F
G
G
R
R
I
V
E
D
K
S
-
P
K
Y
I
N
S
P
D
S
R
V
F
K
K
G
E
N
L
F
G
L
Y
E
A
K
E
Y
I
K
E
E
G
F
A
I
L
V
E
G
Y
F
D
L
L
R
L
F
S
E
G
I
R
N
V
V
A
P
L
G
T
A
L
T
Q
N
Q
A
N
L
L
S
K
F
T
K
K
V
Y
I
L
Y
D
G
D
D
A
G
R
K
A
M
K
S
A
I
P
L
L
L
----
S
A
G
V
E
V
Y
P
V
Y
L
P
E
G
Y
D
P
D
E
F
I
K
E
F
G
K
E
E
L
R
R
L
I
N
-
S
S
G
E
L
F
E
T
L
I
K
T
A
R
E
N
L
E
--------
E
K
T
R
E
F
R
Y
Y
L
G
F
I
S
D
G
V
R
R
F
A
L
A
S
E
F
H
T
K
Y
K
V
P
M
E
I
L
L
M
K
I
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
87.34
38%
-84
- C4 -
2AU3
1
DNAG_AQUAE
A:
[7-378]
---------
I
D
E
L
R
R
E
I
D
I
V
D
V
I
S
E
Y
L
N
L
E
K
V
G
S
N
Y
R
T
N
C
P
F
H
P
D
D
T
P
S
F
Y
V
S
P
S
K
Q
I
F
K
C
F
G
C
G
V
G
G
D
A
I
K
F
V
S
L
Y
E
D
I
S
Y
F
E
A
A
L
E
L
A
K
R
Y
G
K
K
L
D
L
E
---------
K
I
S
K
D
E
K
V
Y
V
A
L
D
R
V
C
D
F
Y
R
E
S
L
L
K
N
---
R
E
A
S
E
Y
V
K
S
R
G
I
D
P
K
V
A
R
K
F
D
L
G
Y
A
P
S
S
-
E
A
L
V
K
V
L
K
E
N
D
L
-
L
E
A
Y
-----
L
E
T
K
N
L
L
S
P
T
-
K
G
V
Y
R
D
L
F
L
R
R
V
V
I
P
I
K
D
P
R
G
R
V
I
G
F
G
G
R
R
I
V
E
-
D
K
S
P
K
Y
I
N
S
P
D
S
R
V
F
K
K
G
E
N
L
F
G
L
Y
E
A
K
E
Y
I
K
E
E
G
F
A
I
L
V
E
G
Y
F
D
L
L
R
L
F
S
E
G
I
R
N
V
V
A
P
L
G
T
A
L
T
Q
N
Q
A
N
L
L
S
K
F
T
K
K
V
Y
I
L
Y
D
G
D
D
A
G
R
K
----
A
M
K
S
A
I
P
L
L
L
S
A
G
V
E
V
Y
P
V
Y
L
P
E
G
Y
D
P
D
E
F
I
K
E
F
G
K
E
E
L
R
-
R
L
I
N
S
S
G
E
L
F
E
T
L
I
K
T
A
R
E
N
L
E
E
K
T
R
E
F
R
Y
Y
L
G
F
I
S
D
G
V
R
R
F
A
L
A
S
E
F
H
T
K
Y
K
V
P
M
E
I
L
L
M
K
I
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
Fugue
81.28
32%
-84
- C4 -
4EDK
7
DNAG_STAAU
A:
[1-321]
-------------------------------------------------------------------------------------------------------------
S
N
A
D
D
L
Q
M
I
E
M
H
E
L
I
Q
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
-----
Y
E
A
G
L
L
S
R
N
E
E
N
F
S
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
G
-
Q
E
-
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
L
L
Q
-
Q
---
G
L
N
V
F
V
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
K
S
F
A
H
Y
K
V
S
I
L
K
D
E
I
A
H
-
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
74.12
40%
-71
- C4 -
4EDV
5
DNAG_STAAU
A:
[17-263]
-----------------------------------------------------------------------------------------------------------------------------
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
-----
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
N
E
E
N
F
S
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
G
-
Q
E
-
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
L
----
L
Q
Q
G
L
N
V
F
V
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
K
S
F
A
H
Y
K
V
S
I
L
K
D
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
73.64
40%
-72
- C4 -
4EDT
4
DNAG_STAAU
A:
[17-263]
-----------------------------------------------------------------------------------------------------------------------------
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
-----
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
N
E
E
N
F
S
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
G
-
Q
E
-
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
L
----
L
Q
Q
G
L
N
V
F
V
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
K
S
F
A
H
Y
K
V
S
I
L
K
D
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
73.43
40%
-71
- C4 -
4EE1
5
DNAG_STAAU
A:
[17-263]
-----------------------------------------------------------------------------------------------------------------------------
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
-----
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
N
E
E
N
F
S
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
G
-
Q
E
-
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
L
----
L
Q
Q
G
L
N
V
F
V
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
K
S
F
A
H
Y
K
V
S
I
L
K
D
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
73.38
40%
-77
- C4 -
4E2K
2
DNAG_STAAU
A:
[17-263]
-----------------------------------------------------------------------------------------------------------------------------
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
-----
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
N
E
E
N
F
S
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
G
-
Q
E
-
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
L
----
L
Q
Q
G
L
N
V
F
V
I
Q
L
P
--
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
K
S
F
A
H
Y
K
V
S
I
L
K
D
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
73.26
40%
-72
- C4 -
4EDG
6
DNAG_STAAU
A:
[17-263]
-----------------------------------------------------------------------------------------------------------------------------
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
-----
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
N
E
E
N
F
S
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
G
-
Q
E
-
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
L
----
L
Q
Q
G
L
N
V
F
V
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
K
S
F
A
H
Y
K
V
S
I
L
K
D
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
73.08
40%
-72
- C4 -
4EDR
7
DNAG_STAAU
A:
[17-263]
-----------------------------------------------------------------------------------------------------------------------------
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
-----
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
N
E
E
N
F
S
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
G
-
Q
E
-
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
L
----
L
Q
Q
G
L
N
V
F
V
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
K
S
F
A
H
Y
K
V
S
I
L
K
D
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
72.95
40%
-71
- C4 -
4EDK
7
DNAG_STAAU
A:
[17-263]
-----------------------------------------------------------------------------------------------------------------------------
E
F
Y
Y
Y
A
L
T
K
T
V
E
G
E
Q
A
L
T
Y
L
Q
E
R
G
F
T
D
A
L
I
K
E
R
G
I
G
F
A
P
D
S
-----
S
H
F
C
H
D
F
L
Q
K
K
G
Y
D
I
E
L
A
Y
E
A
G
L
L
S
R
N
E
E
N
F
S
Y
Y
D
R
F
R
N
R
I
M
F
P
L
K
N
A
Q
G
R
I
V
G
Y
S
G
R
T
Y
T
G
-
Q
E
-
P
K
Y
L
N
S
P
E
T
P
I
F
Q
K
R
K
L
L
Y
N
L
D
K
A
R
K
S
I
R
K
L
D
E
I
V
L
L
E
G
F
M
D
V
I
K
S
D
T
A
G
L
K
N
V
V
A
T
M
G
T
Q
L
S
D
E
H
I
T
F
I
R
K
L
T
S
N
I
T
L
M
F
D
G
D
F
A
G
S
E
A
T
L
K
T
G
Q
H
L
----
L
Q
Q
G
L
N
V
F
V
I
Q
L
P
S
G
M
D
P
D
E
Y
I
G
K
Y
G
N
D
A
F
T
T
F
V
K
N
D
K
K
S
F
A
H
Y
K
V
S
I
L
K
D
E
I
A
H
N
D
L
S
Y
E
R
Y
L
K
E
L
S
H
D
I
S
L
M
K
S
S
I
L
Q
Q
K
A
I
N
D
V
A
P
F
F
N
V
S
P
E
Q
L
A
N
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
64.83
54%
17
- C4 -
1EQN
-
DNAG_ECOLI
A:
[116-421]
--------------------------------------------------------------------------------------------------------------------
L
Y
Q
L
M
D
G
L
N
T
F
Y
Q
Q
S
L
Q
-
Q
P
V
A
T
S
A
R
Q
Y
L
E
K
R
G
L
S
H
E
V
I
A
R
F
A
I
G
F
A
P
P
G
W
D
N
V
L
K
R
F
G
G
N
P
E
N
R
Q
S
L
-----
I
D
A
G
M
L
V
T
N
-
D
Q
G
R
S
Y
D
R
F
R
E
R
V
M
F
P
I
R
D
K
R
G
R
V
I
G
F
G
G
R
V
L
G
N
-
D
T
-
P
K
Y
L
N
S
P
E
T
D
I
F
H
K
G
R
Q
L
Y
G
L
Y
E
A
Q
Q
D
N
A
E
P
N
R
L
L
V
V
E
G
Y
M
D
V
V
A
L
A
Q
Y
G
I
N
Y
A
V
A
S
L
G
T
S
T
T
A
D
H
I
Q
L
L
F
R
A
T
N
N
V
I
C
C
Y
D
G
D
R
A
G
R
D
A
A
W
R
A
L
E
T
A
L
P
-
Y
M
T
D
G
R
Q
L
R
F
M
F
L
P
D
G
E
D
P
D
T
L
V
R
K
E
G
K
E
A
F
E
A
R
-
M
E
Q
A
M
P
L
S
A
F
L
F
N
S
L
M
P
Q
V
D
L
S
T
P
D
G
R
A
R
L
S
T
L
A
L
P
L
I
S
Q
V
P
G
E
T
L
R
I
Y
L
R
Q
E
L
G
N
K
L
G
I
L
D
D
S
Q
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
53.75
50%
-98
- C4 -
1D0Q
1
DNAG_GEOSE
B:
[2-97]
-
G
H
R
I
P
E
E
T
I
E
A
I
R
R
G
V
D
I
V
D
V
I
G
E
Y
V
Q
L
K
R
Q
G
R
N
Y
F
G
L
C
P
F
H
G
E
K
T
P
S
F
S
V
S
P
E
K
Q
I
F
H
C
F
G
C
G
A
G
G
N
A
F
T
F
L
M
D
I
E
G
I
P
F
V
E
A
A
K
R
L
A
A
K
A
G
V
D
L
S
V
Y
E
L
D
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50
Fugue
53.45
48%
-87
- C4 -
1D0Q
1
DNAG_GEOSE
A:
[2-103]
-
G
H
R
I
P
E
E
T
I
E
A
I
R
R
G
V
D
I
V
D
V
I
G
E
Y
V
Q
L
K
R
Q
G
R
N
Y
F
G
L
C
P
F
H
G
E
K
T
P
S
F
S
V
S
P
E
K
Q
I
F
H
C
F
G
C
G
A
G
G
N
A
F
T
F
L
M
D
I
E
G
I
P
F
V
E
A
A
K
R
L
A
A
K
A
G
V
D
L
S
V
Y
E
L
D
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
53.40
49%
-98
- C4 -
1D0Q
1
DNAG_GEOSE
A:
[2-99]
-
G
H
R
I
P
E
E
T
I
E
A
I
R
R
G
V
D
I
V
D
V
I
G
E
Y
V
Q
L
K
R
Q
G
R
N
Y
F
G
L
C
P
F
H
G
E
K
T
P
S
F
S
V
S
P
E
K
Q
I
F
H
C
F
G
C
G
A
G
G
N
A
F
T
F
L
M
D
I
E
G
I
P
F
V
E
A
A
K
R
L
A
A
K
A
G
V
D
L
S
V
Y
E
L
D
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------