Atome 2 Filter

@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : PA0593: (2016-01-11 )
MSLRFALTPGEPAGIGPDLCLLLARSAQPHPLIAIASRTLLQERAGQLGLAIDLKDVSPAAWPERPAKAGQLYVWDTPLAAPVRPGQLDRANAAYVLETLTRAGQGCLDGHFAGMITAPVHKGVINEAGIPFSGHTEFLADLTHTAQVVMMLATRGLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIEPCLERLRGEGLDLIGPLPADTLFTPKHLEHCDAVLAMYHDQGLPVLKYKGFGAAVNVTLGLPIIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQMAASRC

Atome Classification :

	(20 SA)									.........10........20--.-....---.---..30.-.....-..40......-.-.50..---......60....-...--.----70...----...----..80.--.------..-....90...-.....100.......110.......120--.-......130.......140....------...150...----....160.......170.......180.......190.......200.-......210.......-220......------------------------------.230..------------------------------.--....240.......250.----------.----------.....260.......270.......280----....-------...290.......300.-....-..310.......320......
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		MSLRFALTPGEPAGIGPDLCL--L-LARS---A---QPHPL-IAIAS-RTLLQERAGQ-L-GLAID---LKDVSPAAWPER-PAK--A----GQLYV----WDT----PLAAP--V------RP-GQLDRANAA-YVLETLTRAGQGCLDGHFAGMITAPVHK--G-VINEAGIPFSGHTEFLADLTHTA------QVVMMLATR----GLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRIL-VCGLNPHAGEGGHLGR-EEIEVIEPC------------------------------LERLRG------------------------------E--GLDLIGPLPADTLFTPKH----------L----------EHCDAVLAMYHDQGLPVLKYKGFGAAVN----VTLG-------LPIIRTSVDHGTALDLA-GSGR-IDSGSLQVALETAYQMAASRC
23	HHSearch	99.60	100%	-132	- C3 -	1YXO		PDXA1_PSEAE	A:[1-328]	MSLRFALTPGEPAGIGPDLCL--L-LARS---A---QPHPL-IAIAS-RTLLQERAGQ-L-GLAID---LKDVSPAAWPER-PAK--A----GQLYV----WDT----PLAAP--V------RP-GQLDRANAA-YVLETLTRAGQGCLDGHFAGMITAPVHK--G-VINEAGIPFSGHTEFLADLTHTA------QVVMMLATR----GLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRIL-VCGLNPHAGEGGHLGR-EEIEVIEPC------------------------------LERLRG------------------------------E--GLDLIGPLPADTLFTPKH----------L----------EHCDAVLAMYHDQGLPVLKYKGFGAAVN----VTLG-------LPIIRTSVDHGTALDLA-GSGR-IDSGSLQVALETAYQMAASRC
1	PsiBlast_PDB	99.26	98%	-132	- C3 -	1YXO		PDXA1_PSEAE	A:[2-328]	-SLRFALTPGEPAGIGPDLCL--L-LARS---A---QPHPL-IAIAS-RTLLQERAGQ-L-GLAID---LKDVSPAAWPER-PAK--A----GQLYV----WDT----PLAAP--V------RP-GQLDRANAA-YVLETLTRAGQGCLDGHFAGMITAPVHK--G-VINEAGIPFSGHTEFLADLTHTA------QVVMMLATR----GLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRIL-VCGLNPHAGEGGHLGR-EEIEVIEPC------------------------------LERLRG------------------------------E--GLDLIGPLPADTLFTPKH----------L----------EHCDAVLAMYHDQGLPVLKYKGFGAAVN----VTLG-------LPIIRTSVDHGTALDLA-GSGR-IDSGSLQVALETAYQMAASRC
19	PsiBlast_CBE	97.64	98%	-129	- C3 -	1YXO		PDXA1_PSEAE	B:[2-328]	-SLRFALTPGEPAGIGPDLCL--L-LARS---A---QPHPL-IAIAS-RTLLQERAGQ-L-GLAID---LKDVSPAAWPER-PAK--A----GQLYV----WDT----PLAAP--V------RP-GQLDRANAA-YVLETLTRAGQGCLDGHFAGMITAPVHK--G-VINEAGIPFSGHTEFLADLTHTA------QVVMMLATR----GLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRIL-VCGLNPHAGEGGHLGR-EEIEVIEPC------------------------------LERLRG------------------------------E--GLDLIGPLPADTLFTPKH----------L----------EHCDAVLAMYHDQGLPVLKYKGFGAAVN----VTLG-------LPIIRTSVDHGTALDLA-GSGR-IDSGSLQVALETAYQMAASRC
6	PsiBlast_PDB	87.56	61%	-122	- C3 -	1R8K		PDXA1_SALTY	A:[6-323]	---RVVITPGEPAGSGPDLVV--Q-LAQR---A---WPIEL-VVCAD-GALLTERAAM-L-GLPLS---LLPYSPDV-PAA-PQP--A----GTLTL----LPV----SLRAP--A------IS-GQLTVENGP-YVVETLARACDGCLNGEFAALITGPVHK--G-VINDAGISFTGHTEFFEERSQAK------KVVMMLATE----ELRVALATTHLPLRAIADAITPALLHEVIAILHHDLRTKFGIAEPRIL-VCGLNPHAGEGGHMGT-EEIDTIIPV------------------------------LDELRA------------------------------Q--GMKLNGPLPADTLFQPKY----------L----------DNADAVLAMYHDQGLPVLKYQGFGRGVN----ITLG-------LPFIRTSVDHGTALELA-GRGK-ADVGSFITALNLAIKMIVNTQ
5	PsiBlast_PDB	87.08	61%	-125	- C3 -	1PTM		PDXA_ECOLI	A:[6-323]	---RVVITPGEPAGIGPDLVV--Q-LAQR---E---WPVEL-VVCAD-ATLLTNRAAM-L-GLPLT---LRPYSPNS-PAQ-PQT--A----GTLTL----LPV----ALRAP--V------TA-GQLAVENGH-YVVETLARACDGCLNGEFAALITGPVHK--G-VINDAGIPFTGHTEFFEERSQAK------KVVMMLATE----ELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRIL-VCGLNPHAGEGGHMGT-EEIDTIIPV------------------------------LNELRA------------------------------Q--GMKLNGPLPADTLFQPKY----------L----------DNADAVLAMYHDQGLPVLKYQGFGRGVN----ITLG-------LPFIRTSVDHGTALELA-GRGK-ADVGSFITALNLAIKMIVNTQ
2	PsiBlast_PDB	86.78	62%	-120	- C3 -	1PS6		PDXA_ECOLI	A:[5-326]	---RVVITPGEPAGIGPDLVV--Q-LAQR---E---WPVEL-VVCAD-ATLLTNRAAM-L-GLPLT---LRPYSPNS-PAQ-PQT--A----GTLTL----LPV----ALRAP--V------TA-GQLAVENGH-YVVETLARACDGCLNGEFAALITGPVHK--G-VINDAGIPFTGHTEFFEERSQAK------KVVMMLATE----ELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRIL-VCGLNPHAGEGGHMGT-EEIDTIIPV------------------------------LNELRA------------------------------Q--GMKLNGPLPADTLFQPKY----------L----------DNADAVLAMYHDQGLPVLKYQGFGRGVN----ITLG-------LPFIRTSVDHGTALELA-GRGK-ADVGSFITALNLAIKMIVNTQ
20	PsiBlast_CBE	86.77	62%	-122	- C3 -	1PS6		PDXA_ECOLI	B:[5-326]	---RVVITPGEPAGIGPDLVV--Q-LAQR---E---WPVEL-VVCAD-ATLLTNRAAM-L-GLPLT---LRPYSPNS-PAQ-PQT--A----GTLTL----LPV----ALRAP--V------TA-GQLAVENGH-YVVETLARACDGCLNGEFAALITGPVHK--G-VINDAGIPFTGHTEFFEERSQAK------KVVMMLATE----ELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRIL-VCGLNPHAGEGGHMGT-EEIDTIIPV------------------------------LNELRA------------------------------Q--GMKLNGPLPADTLFQPKY----------L----------DNADAVLAMYHDQGLPVLKYQGFGRGVN----ITLG-------LPFIRTSVDHGTALELA-GRGK-ADVGSFITALNLAIKMIVNTQ
22	HHSearch	85.83	57%	-123	- C3 -	3LXY		PDXA_YERPE	A:[7-332]	HNNRLVITPGEPAGVGPDLAI--T-LAQQ---D---WPVEL-VVCAD-PALLLARASQ-L-NLPLQ---LREYQADQPAIA--QQ--A----GSLTI----LPV----KTAVN--V------VP-GKLDVGNSH-YVVETLAKACDGAISGEFAALVTGPVQK--S-IINDAGIPFIGHTEFFADRSHCQ------RVVMMLATE----ELRVALATTHLPLLAVPGAITQASLHEVITILDNDLKTKFGITQPQIY-VCGLNPHAGEGGHMGH-EEIDTIIPA------------------------------LNTLRQ------------------------------Q--GINLIGPLPADTLFQPKY----------L----------QHADAVLAMYHDQGLPVLKYQGFGRAVN----ITLG-------LPFIRTSVDHGTALELA-ATGT-ADVGSFITALNLAIKMINNS-
3	PsiBlast_PDB	85.72	58%	-125	- C3 -	3LXY		PDXA_YERPE	A:[10-328]	---RLVITPGEPAGVGPDLAI--T-LAQQ---D---WPVEL-VVCAD-PALLLARASQ-L-NLPLQ---LREYQ-ADQPAI-AQQ--A----GSLTI----LPV----KTAVN--V------VP-GKLDVGNSH-YVVETLAKACDGAISGEFAALVTGPVQK--S-IINDAGIPFIGHTEFFADRSHCQ------RVVMMLATE----ELRVALATTHLPLLAVPGAITQASLHEVITILDNDLKTKFGITQPQIY-VCGLNPHAGEGGHMGH-EEIDTIIPA------------------------------LNTLRQ------------------------------Q--GINLIGPLPADTLFQPKY----------L----------QHADAVLAMYHDQGLPVLKYQGFGRAVN----ITLG-------LPFIRTSVDHGTALELA-ATGT-ADVGSFITALNLAIKMINNS-
4	PsiBlast_PDB	85.67	61%	-122	- C3 -	1PS7		PDXA_ECOLI	A:[6-323]	---RVVITPGEPAGIGPDLVV--Q-LAQR---E---WPVEL-VVCAD-ATLLTNRAAM-L-GLPLT---LRPYSPNS-PAQ-PQT--A----GTLTL----LPV----ALRAP--V------TA-GQLAVENGH-YVVETLARACDGCLNGEFAALITGPVHK--G-VINDAGIPFTGHTEFFEERSQAK------KVVMMLATE----ELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRIL-VCGLNPHAGEGGHMGT-EEIDTIIPV------------------------------LNELRA------------------------------Q--GMKLNGPLPADTLFQPKY----------L----------DNADAVLAMYHDQGLPVLKYQGFGRGVN----ITLG-------LPFIRTSVDHGTALELA-GRGK-ADVGSFITALNLAIKMIVNTQ
21	PsiBlast_CBE	76.70	39%	-112	- C3 -	4JQP		?	B:[18-342]	----IGITMGDAAGVGAEVVV--KSLAHASVYA---QCRPL-VIGDA-KRL--ERANQ-IVGGEMK---IRRIEDAS--EA-RYE--Q----GTIDC----IDL----GLIPD--D------LPFGQLSAIAGD-AAYQYIKRAVELAQSGKIDAICTAPLNK--E-ALHAGGHKYPGHTEMLAHLTGVD------EVSMMLVAP----QLRVIHVTTHIGIIDAIRKIEPGLVQRTIERGNATLV-KAGIERPRIG-VCGINPHAGENGLFGYGEEEEKIIPA------------------------------VTLLQE------------------------------R--GLDVTGPLPADTLFFRAG----------R----------GDFDLVVAMYHDQGHGPVKVLGLEAGVN----VTVG-------LEVIRTSVDHGTAFDIA-GKGV-VDEGSMLEALRQGAELATRR-
8	PsiBlast_PDB	75.70	39%	-111	- C3 -	4JQP		?	A:[18-342]	----IGITMGDAAGVGAEVVV--KSLAHASVYA---QCRPL-VIGDA-KRL--ERANQ-IVGGEMK---IRRIEDAS--EA-RYE--Q----GTIDC----IDL----GLIPD--D------LPFGQLSAIAGD-AAYQYIKRAVELAQSGKIDAICTAPLNK--E-ALHAGGHKYPGHTEMLAHLTGVD------EVSMMLVAP----QLRVIHVTTHIGIIDAIRKIEPGLVQRTIERGNATLV-KAGIERPRIG-VCGINPHAGENGLFGYGEEEEKIIPA------------------------------VTLLQE------------------------------R--GLDVTGPLPADTLFFRAG----------R----------GDFDLVVAMYHDQGHGPVKVLGLEAGVN----VTVG-------LEVIRTSVDHGTAFDIA-GKGV-VDEGSMLEALRQGAELATRR-
25	HHSearch	69.51	28%	-110	* C3 *	3TSN		PDXA_CAMJE	A:[3-366]	AMKKLAISIGDINSIGLEILV--R-SHEE---LS--KICTP-FYFIH-ESLLNKALKL-L-NLKLFNAKIVAFKDDK-DYEFNFIKKE----NSLEIYSFCLPLGFKVDENFE--I------QA-GEIDAKSGL-YGFLSFKAASYFVYEKHAHALLTLPIHK--K-AWEDAGLKYKGHTDALRDFFKK-------NAIMMLGCK----ELFVGLFSEHIPLAKVSKKITFKNLSIFLKDFYKET------HFKKMG-LLGFNPHAGDYGVIGG-EEEKIMEKA------------------------------IAFVNAFLHSKKDEKFFKKALKDENLQKELLLNFKGK--GVYLPYPLVADTAFTKTG----------L----------KNCNRLVAMYHDLALAPLKALYFDKSIN----VSLN-------LPIIRVSVDHGTAFDKA-YKNAKINTKSYFEAAKFAINLHSK--
9	PsiBlast_PDB	61.07	29%	-115	- C3 -	3TSN		PDXA_CAMJE	A:[81-363]	---------------------------------------------------------------------------------------------EIYS----FCL----PLGFK--VDENFEIQA-GEIDAKSGL-YGFLSFKAASYFVYEKHAHALLTLPIHK--K-AWEDAGLKYKGHTDALRDF-FKK------NAIMMLGCK----ELFVGLFSEHIPLAKVSKKITFKNLSIF-------LKDFYKETHFKKMGLLGFNPHAGDYGVIGG-EEEKIMEKAIAFVNAFLHSKKDEKFFKKALKDENLQKELLLNFKG------------------------------K--GVYLPYPLVADTAFTKTG----------L----------KNCNRLVAMYHDLALAPLKALYFDKSIN----VSLN-------LPIIRVSVDHGTAFDKAYKNAK-INTKSYFEAAKFAINLHSK--
32	HHSearch	46.35	13%	-109	- C3 -	3UF6		?	A:[18-290]	-SFVFAVAGAD----D-EVVL--E-TIRL---ALKQKLGKF-LLFGK-KEDKTLTANE-----S------------------------------VTW----IQT-------DT--A---------------------EAAAQGAILAVKNKEADILVKGFIPT--A-TLMH---------HVLKKENGLRTDQLLSQIAIFDIPT----YHKPLLITD----CAMNVAPKTKEKIAITENALAVAH-QIGITNPKIA-LLSA----VEEVTAKM-PSTLEAQEV------------------------------VQHFG-------------------------------N--QISVSGPLALDVAISKEA----------ALHKGITDSSAGEADILIAPNIETGNALYKSLVYFAGAKVGS-AVVGAK-----VPIVISSRND--------------SPENKLASFILTVRLVE---
24	HHSearch	46.19	36%	-26	- C3 -	2HI1	-	PDXA2_SALTY	A:[2-327]	ETKTVAITMGDPAGIGPEIIV--K-ALSE---DG--LNGAPLVVIGC-LATLKRLQAKGI-TPNVE---LRAIERVA-EAR--FA--P----GIIHV----IDEPL--AQPEA--L------EA-GKVQAQAGD-LAYRCVKRATELALRGDVQAIATAPLNK--E-ALHLAGHNYPGHTELLATLTHSR------DYAMVLYTD----KLKVIHVSTHIALRKFLDTLSTARVETVIGIADTFLK-RVGYVKPRIA-VAGVNPHAGENGLFGD-EETRILTPA------------------------------ITDARA------------------------------K--GMDVYGPCPPDTVFLQAY----------E----------GQYDMVVAMYHDQGHIPLKLLG-YDGVN----ITAG-------LPFIRTSADHGTAFDIA-WTGK-AKSESMAVSIKLAMQLA----
27	HHSearch	45.60	16%	-109	- C3 -	1TD9		PTAS_BACSU	A:[22-318]	-DVKIVFPEGL----DE-RIL--E-AVSK---LAGNKVLNP-IVIGN-ENEIQAKAKE-L-NLTLGG--VKIYDPHT-YEG--M---E----DLVQA----F--------VER--R------KG-K-ATEEQARKALLDENYFGTMLVYKGLADGLVSGAAHS--TADTVRPALQIIKTKEGVKKTS---------GVFIMAR------GEEQYVFAD----CAINIAPDSQDLAEIAIESANTAK-MFDI-EPRVA-MLS----FSTKGSAKS-DETEKVADA------------------------------VKIAKEKA----------------------------P--ELTLDGEFQFDAAFVPSVAEKKAPDSEIK----------GDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLN-----MPVNDLSRGC-NAEDVY-NLAL-ITAAQAL--------------
7	PsiBlast_PDB	43.35	37%	-17	- C3 -	2HI1	-	PDXA2_SALTY	A:[7-327]	-----AITMGDPAGIGPEIIVKAL-SEDG---L---NGAPL-VVIGCLATLKRLQAKG-I-TPNVE---LRAI------ER-VAE--ARFAPGIIHV----IDE----PLAQPEAL------EA-GKVQAQAGD-LAYRCVKRATELALRGDVQAIATAPLNK--E-ALHLAGHNYPGHTELLATLTHSR------DYAMVLYTD----KLKVIHVSTHIALRKFLDTLSTARVETVIGIADTFLK-RVGYVKPRIA-VAGVNPHAGENGLFGD-EETRILTPA------------------------------ITDARA------------------------------K--GMDVYGPCPPDTVFLQAY----------E----------GQYDMVVAMYHDQGHIPLKLLG-YDGVN----ITAG-------LPFIRTSADHGTAFDIA-WTGK-AKSESMAVSIKLAMQLA----
30	HHSearch	43.26	15%	-95	- C3 -	2AF4		PTAS_METTE	C:[16-318]	-NKTIALPETE----DI-RTL--Q-AAAK---ILERGIADI-VLVGN-EADIKALAGD-L-DLS-K---AKIVDPKT-YEK--K---D----E---Y----INA----FYELR--K------HK-GITLENAAE-IMSDYVYFAVMMAKLGEVDGVVSGAAHS--SSDTLRPAVQIVKTAKGA-ALAS--------AFFIISVPDCEYGSDGTFLFAD----SGMVEMPSVEDVANIAVISAKTFE-LLVQDVPKVA-MLSY----STKGSAKS-KLTEATIAS------------------------------TKLAQELA----------------------------P--DIAIDGELQVDAAIVPKVAASKAPGSPVA----------GKANVFIFPDLNCGNIAYKIAQRLAKA-----EAYGPITQGLAKPINDLSRGC-SDEDIV-GAVA-ITCVQAAAQDK----------
28	HHSearch	43.14	16%	-95	- C3 -	1VMI		EUTD_ECOLI	A:[26-325]	-PARVVFPDAL----DQ-RVL--K-AAQY---LHQQGLATP-ILVAN-PFELRQFALS-H-GVAMDG--LQVIDPHG-NLA--MR--E-------EF----AHR------WLA--R------AG-E-KTPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTAN-VLR-AGLRIIGLQPGCKTLS---------SIFLMLPQY----SGPALGFAD----CSVVPQPTAAQLADIALASAETWRAITGE-EPRVA-MLS----FSSNGSARH-PCVANVQQA------------------------------TEIVRE------------------------------RAPKLVVDGELQFDAAFVPEVAAQKAPASPLQ----------GKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLA-----APMHDLSRGC-SVQEII-ELAL-VAAVPR---------------