@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA1467: (2016-01-29 )
MSKPTVRVLALLELLQSHGQLSGSELARRLEVDGRTLRRYIVALEELGIPISAERGRHGGYRLVAGFKLPPLMFSAEETLAVSLGLLAVRSLGLGESELALESAQAKLSRVMPVALRRRLVALRETASLDLARARAGTSVAALATLAEAAQVRARVEFRYRDPQGAETLRQLDPYGLAYRNGCWYVSGFCHLRQALRSFRLDRLDAPRMLAERFERPADFDTLRHLRESFARMPRAYPVEILMRAAREQVVAVLGEPLGLLAEVDGGTLLRASTDDLDWFARRLCGLPFDFEVRQPLELREPLRRQAERVLRNLGQEEASDHR

Atome Classification :

(20 SA) ------------------.........10......---.--.20..------......--30........-40...----....-.-50..--......60.....-.-..---70..---..--....80........90........100----...-.....110---.........120.......130.-.....-.140.......150.......160.......170.......180..-..-...190.......200.......210..-..-...220.......----230...-....240.......----.250-....-....260....-...270.....-----..280.......290...-------....300..--------.....310.......320.----------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------MSKPTVRVLALLELLQS---H--GQLSG------SELARR--LEVDGRTLRR-YIVAL----EELG-I-PISA--ERGRHGGYRLVAG-F-KL---PPLM---FS--AEETLAVSLGLLAVRSLGLGESELAL-----ESA-QAKLSR-----VMPVALRRRLVALRETASLDLAR-ARAGT-SVAALATLAEAAQVRARVEFRYRDPQGAETLRQLDPYGLAYRNGCW-YV-SGFCHLRQALRSFRLDRLDAPRMLAERF-ER-PADFDTLRHLRES----FARMPR-AYPVE-ILMRAARE----QVV--AVLG-EPLGLLAEVDG-GTLLRASTDDL-----DWFARRLCGLPFDFEVRQ-------PLELREPLR--------RQAERVLRNLGQEEASDHR----------------------------------------------------------
33 Fugue 62.5721% -40 * C2 *4C2E - CTPB_BACSU A:[2-436] ADSERDKAMDKIEKAYELISNEYVEKVDREKLLEG---A--IQGML------STLNDPYSVYMDKQTAKQ-FSDSL----DSSF-E-GIGA--EVGMEDGKIIIVSPF-KK---SPAE---KAGLKPNDEIISINGESMAGKDLNHAVLKIRGKKGSSV-SMKIQRPGTKKQLSFRIKRAEIPLETVFASEKKV-QGHSV-GYIAISTFSEHTTEDFAKALRELEKKEIEGLV-IDVRGNPGGY---------IQSVEEILKHF-VTKDQPYIQIAERNGDK-KRYFSTLTHKKAYPVNVITDKGS-AAASE-ILAGALKEAGHYDVVGDTSFG-KGTVQQAVPMGDGSNIKLTLYKWLTPNGNWIHKK--GIEPTIAIKQPDYFSAGPLQLKEPLKVDMNNEDVKHAQVLLKGLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGIIDTRTAETLNQQIEKKKSDEKNDLQLQTALKSLF
21 HHSearch 58.8822%-150 - C4 -3RKX - ? A:[4-63] ------------------------YSQDVLQLLYKNK-P--NYISG------QSIAES--LNISRTAVKK-VIDQL----KLEG-C-KIDS--VNH--KGHLLQQL-P-DI---WYQG---II--DQYTKSSALFDFSEVYDSIDSTQLAA-----KKS-LVGNQS-----SFFILSDEQTSKGQGLWMSVVLR-PNVAF-SMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLT-EM-VANNDGIEAIICGIGINLTQQLENFDES-IR-HRATSIQLHDKNK----LDRYQF-LERLL-QEIEKRYN----QFL--TLPF-SEIREEYNAAS-NIWNRTLLFTE-----NKQFKGQAIDLDYDGYLI-------VRDEAGESH--------RLISADIDF--------------------------------------------------------------------
37 Fugue 56.5018% -26 - C1 -3SPE ? A:[7-286] -------------------ANPS-RLIVAIEIVED---E--IPLT----------------KVDGLKARI-IL---------------IED--NTSEVGTQRVLPG-T-LV---SD---------KDGSQSLVYPLFEAPVSFFG--KLGD-----SNGMRVWSTT-----TADIE------------EFDEAAMAKFKT-R-----------QFRIQLIEKPESPVIVKTADQQDYLNITFDKGVY-SDMY---NADLYVGDVLVDSYSDDGVVSGLS-PL-YSPFSQFYVYHEN----IDLVRQMIYDTEMRVNPAAAA----HTT--A---------PGEIDF-LTFLAVDGDPY-----QG-----------IQVLG-------PLDGGITLG--------KDG-----NIYASGGTDG-----------------------------------------------------------
28 Fugue 53.6525%-136 - C4 -1BIA - ? ?:[1-63] -------------------MKDNTVPLKLIALLAN---G--EFHSG------EQLGET--LGMSRAAINK-HIQTL----RDWG-V-DVFT--VPGK--GYSLPEP-I-QL---LNAK---QI--LGQLDGGSVAVLPVIDSTNQYLLDRI-----GEL-KSGDAC-----IAEYQQAGSPFGANLYLSMFWRL-EQPAA-AIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQDRKLAGILVEL-TG-AAQIVIGAGINMAMWITLQEAGINLDRN-TL-AAMLIRELRAALE----LFEQEG-LAPYL-SRWEKLDN----FIN--RPVK-LIIGDKEIFGI-SRGIDKQGALL-----LEQDGIIKPWMGGEISLR-----------------------------------------------------------------------------------------------------
12 HHSearch 52.1523%-137 - C4 -1BIA - BIRA_ECOLI A:[1-74] -------------------MKDNTVPLKLIALLAN---G--EFHSG------EQLGET--LGMSRAAINK-HIQTL----RDWG-V-DVFT--VP--GKGYSLPEP-I--------QL---LN--AKQILGQLDGGSVAVLPVIDSTNQYL-----LDR-IGELKS-----GDACIAEYQQAGSPFGANLYLSM-FWRLE-QPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQDRKLAGI-LV-ELTGAAQIVIGAGINMAMWITLQEAGIN-LD-RNTLAAMLIRELR----AALELF-EQEGL-APYLSRWE----KLD--NFIN-RPVKLIIGDKE-IFGISRGIDKQ-----GALLLEQDGIIKPWMGGE-------ISLR------------------------------------------------------------------------------------------
10 HHSearch 51.0625%-107 - C4 -1J5Y NIAR_THEMA A:[17-100] -------------------TVRQERLKSIVRILERS--K--EPVSG------AQLAEE--LSVSRQVIVQ-DIAYL----RSLG-Y-NIVA--T--P-RGYVLAGG-KSGVSRLVAVK---HA--PEEIKEELLCVVRNGGRIVDVIVEHP-----VYG-EIRGII-----DVSSEEEVLKFVNLMEMAKTEPL-LTLSG-GVHLHTIEAPDEETMERIMRELKKKGFLIEE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 HHSearch 50.2223%-117 * C4 *2Y75 CYMR_BACSU A:[8-71] ----------------------GRYGLTIMIELAKKHGE--GPTSL------KSIAQT--NNLSEHYLEQ-LVSPL----RNAG-L--VKS--I----GGYVLGSE-P-DA---ITAG---DI--IRVLEGPISPVEVLEDEEPAKRELWI-----RIR-DAVKEV-----LDSTTLEDLASYTD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 50.0631%-119 - C4 -2P6S - ? A:[13-53] --------------------------IKILQVLQE---N--GRLTN------VELSER--VALSPSPCLR-RLKQL----EDAG-I-VRQY--AALLSPESVNLGL-Q-AF---IRVS---IR--KAKDAREDFAASVRKWPEVLSCFALT-----GET-DYLLQA-----FFTDMNAFSHFVLDTLLSHHGVQ-DAQSS-FVLKEIKHTTSLPLNHLL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 50.0131%-114 - C4 -2P6T - ? A:[13-53] --------------------------IKILQVLQE---N--GRLTN------VELSER--VALSPSPCLR-RLKQL----EDAG-I-VRQY--AALLSPESVNLGL-Q-AF---IRVS---IR--KAKDAREDFAASVRKWPEVLSCFALT-----GET-DYLLQA-----FFTDMNAFSHFVLDTLLSHHGVQ-DAQSS-FVLKEIKHTTSLPLNHLL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 49.0316%-111 - C4 -1QGP - DSRAD_HUMAN A:[140-198] -------------------------EQRILKFLEELGEG--KATTA------HDLSGK--LGTPKKEINR-VLYSL----AKKG-K--LQK--EAGTPPLWKIA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 48.9431%-112 - C4 -2P5V - ? A:[13-53] --------------------------IKILQVLQE---N--GRLTN------VELSER--VALSPSPCLR-RLKQL----EDAG-I-VRQY--AALLSPESVNLGL-Q-AF---IRVS---IR--KAKDAREDFAASVRKWPEVLSCFALT-----GET-DYLLQA-----FFTDMNAFSHFVLDTLLSHHGVQ-DAQSS-FVLKEIKHTTSLPLNHLL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 Fugue 48.8920% -27 - C2 -4PX7 ? A:[1-258] ---------------------------------------------G------RSIARR--TAVGAALLLVMP----------VA-V-WISG--WRWQPGSWLLKAA-F-WV---TETVTQPWG--VITHLILFGWFLWCLRFRIKAAFVLF-----AIL-AAAILV-----GQGVKSWIKD-KVQEPRPFVIWL-EKTHHMPVDKFYTL-KRAERGNLVKEQLAEPQYLRSHWQKET-GFAFPSGHTMFA-ASWALLAVGLLWPRRRTLTIAILLVWAT-GVMGSRLL--------------------------------------------LGMHWPRDLVVATL-ISWALVAV--A-----TWLAQRICG-----PLTP-------PEENREIAQ--------REQESL----------EHH----------------------------------------------------------
8 HHSearch 48.6023%-103 - C4 -3KE2 ? A:[16-67] -------------------HKAFLRKLYLAHLMD----D--ARHNL------LSLGKL--TGMPRRTLQD-AIASF----ADIG-I-EVEF--VQDGERHNAGYYR-I-RT---WGPI---SS--AWMDTHVDEVKSLLGVDDAVGQA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 48.3915% -90 - C4 -1QBJ DSRAD_HUMAN A:[10-70] -----------------------DQEQRILKFLEELGEG--KATTA------HDLSGK--LGTPKKEINR-VLYSL----AKKG-K--LQK--EAGTPPLWKIA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 HHSearch 48.0513%-102 - C4 -2LNB - ZBP1_HUMAN A:[22-76] --------------------------QRILQVLTEA--G--SPVKL------AQLVKE--CQAPKRELNQ-VLYRM----KKEL-K--VSL--T--SPATWCLGGT-D-PE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 Fugue 47.1915% -44 - C3 -1E2X FADR_ECOLI A:[10-231] ------------------QSPAGFAEEYIIESIWN---N--RFPPGTILPAERELSEL--IGVTRTTLRE-VLQRL----ARDG-W----------------------------------------------------LTIQHGKPTKVNN-----FWE-TSGLNI-----LETLARLDHESVPQLIDNLLSVR-TNIST-IFIRTAFRQHPDKAQEVLATANEVADH--------------------------------ADAFAELDYNIFRGLAFAS-GN-PIYGLILNGMKGL----YTRIGR-HYFAN----PEARS----LAL--GFYH-KLSALCSE------------------------------------GA-------HDQVYETVR--------RYGHESGEIWHRMQ---------------------------------------------------------------
9 HHSearch 45.9018%-115 - C4 -1O57 PURR_BACSU A:[2-74] ------------------KFRRSGRLVDLTNYLLT---HPHELIPL------TFFSER--YESAKSSISE-DLTIIKQTFEQQG-IGTLLT--VPGAAGGVKYIPK-M-KQ---AEAE---EF--VQTLGQSLANPERILPGGYVYLTDIL-----GKP-SVLSKV-----GKLFASVFAEREIDVVMTVATKG-IPLAY-AAASYLNVPVVIVRKDGSTVSINYVSGSSNRIQTMSLAKRSMKTGS-NV-LIIDDFMKAGGTINGMINLLDEFNANVA-GI-GVLVEAEGVDERL----VDEYMS-LLTLS-TINMKEKS----IEI--QNGN-FLRFFKDN-------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 44.9629% -59 - C4 -2HTJ - KS71A_ECOLX A:[5-62] ----------------------------ILEFLNR---H--NGGKT------AEIAEA--LAVTDYQARY-YLLLL----EKAG-M-VQRSPLRRGMATYWFLKGE-K-QA---GQSC---SS--TTLEHHHHHH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 44.3827%-119 - C4 -3SQN - ? A:[11-55] -------------------EKDLLRQIRLLEQLLN---V--PQLTA------KRLAAQ--IQTTERTVFS-DLQYI----RSQL-P-ADWS--IETDSSGIRLRNQ-Q-TN---ELWS---LF--LPQSISIQLLKELLFTKELVTTSFLS-----TSG-VSYETL-----KRHIKKMNQALRDFHLTIQLTTM-TIQLI-GAESNIRIFYHRLLVPFTHNNYFFDDYSIHEEHYFQFLKQVYSSEL-TV-ETEEIFGACWFFINTIRNKANCRVSQFS-FD-SKDVLFQLYQPSL----AKLYAS-EGIYL-QGEESFFA----FFC--FLES-WNYDNVYGETL-ASALHTHYSQL-----RKSLQQFVTNLSTEEARP-------DLIQTNLLD--------NLLLLFIKYTESPTLSEQF----------------------------------------------------------
36 Fugue 43.7823% -62 - C4 -2HTJ - KS71A_ECOLX A:[1-81] ------------------------MKNEILEFLNR---H--NGGKT------AEIAEA--LAVTDYQARY-YLLLL----EKAGMV-QRSP--LRRGMATYWFLKG-E-KQ---AGQS---CS--STTLEHHHHHH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------