@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA2408: (2016-02-07 )
MTVAERLCATPCGPVIEFAGIDLSLGGSRILDGVRLRVEAGSVHALVGPNGGGKSSLVKTLLGQMPHRGELRLEWPGAPGCIGYVPQALEFDRGLPLTVDDFMAAMCQRRPAFLGLSRSRRPAIDAALERVGMLAKRGRRMGALSGGERQRVLLAQGLVPPPQLLVLDEPMSALDEGGIQVFERLLLDWRQAGVTVLWIEHDLEAVGRLADRVSGLNRHLLFDGPAASSLTPERLLTLFSTQPRKNAEASR

Atome Classification :

(20 SA) .........10........20.-.....----.----.30........40........50........60-..-..-..---..----------70......-------.-----------.80-----........90..---..---------....100-.-------.......110.----..-..---..120..--...---...-----130-----------..-----------...-------..140........150.......------160.......170...-..---..180.......-190-.-.......200.......210......-.220.......230-.....----...240.......250---------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MTVAERLCATPCGPVIEFAGID-LSLGG----S----RILDGVRLRVEAGSVHALVGPNGGGKSSLVKTL-LG-QM-PH---RG----------ELRLEWPG-------A-----------PGC-----IGYVPQALEFDR---GL---------PLTVDD--F-------MAAMCQRRPAF----LG-LS---RSRR-PA--IDA---ALE-----RVG-----------ML-----------AKR-------GRRM-GALSGGERQRVLLAQGLV------PPPQLLVLDEPMSALD-EG---GIQVFERLLLDW-RQ--A-GVTVLWIEHDLEAVGRLADRVSGLNR-HLLFDGPAASSLT--PERLL----TLFSTQPRKNAEASR----------------------------------------------------------------------------------------
2 PsiBlast_PDB 87.0731%-101 - C1 -4G1U HMUV_YERPE C:[5-237] -------AVTPVA-LLEASHLH-YHVQQ----Q----ALINDVSLHIASGEMVAIIGPNGAGKSTLLRLL-TG-YLSPS---HG----------ECHLL----------G-----------QNL-----NSWQPKALARTR---AVMRQYSELAFPFSVSE--V-------I----QMGRAP----YG-GS---QDRQ--A--LQQ---VMA-----QTD-----------CL-----------ALA-------QRDY-RVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALD-LY---HQQHTLRLLRQLTRQ--E-PLAVCCVLHDLNLAALYADRIM------LLAQGKLVACGT--PEEVL----N------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 83.5031%-102 - C1 -4G1U HMUV_YERPE D:[10-237] ------------A-LLEASHLH-YHVQQ----Q----ALINDVSLHIASGEMVAIIGPNGAGKSTLLRLL-TG-YLSPS---HG----------ECHLL----------G-----------QNL-----NSWQPKALARTR---AVMRQYSELAFPFSVSE--V-------I----QMGRAP----YG-GS---QDRQ--A--LQQ---VMA-----QTD-----------CL-----------ALA-------QRDY-RVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALD-LY---HQQHTLRLLRQLTRQ--E-PLAVCCVLHDLNLAALYADRIM------LLAQGKLVACGT--PEEVL----N------------------------------------------------------------------------------------------------------
64 HHSearch 78.1827%-114 - C1 -2NQ2 - Y1470_HAEIN C:[3-227] -------------KALSVENLG-FYYQAE---N----FLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLL-LG-IHRPI---QG----------KIEVY-----------------------QS-----IGFVPQFFSSPF---AY-----------SVLD--I-------VLMGRSTHINT----FAKPK---SHDY-QV--AMQ---ALD-----YLN-----------LT-----------HLA-------KREF-TSLSGGQRQLILIARAIA------SECKLILLDEPTSALD-LA---NQDIVLSLLIDL-AQS-Q-NMTVVFTTHQPNQVVAIANKTLLLNK-QNFKFGETRNILT--SENLT----ALFHL--------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 74.0731%-102 - C1 -1Z47 ? A:[14-241] --------------TIEFVGVEKIYPGG----A----RSVRGVSFQIREGEMVGLLGPSGSGKTTILRLI-AGLER-PT---KG----------DV---WIG-------G-----------KRV-----TDLPPQ----KR---NV---------GLVFQN--Y---------ALFQHMTVYDNVSFG-LR---EKRV-PKDEMDARVRELL-----RFM-----------RL-----------ESY-------ANRFPHELSGGQQQRVALARALA------PRPQVLLFDEPFAAID-TQIRRELRTFVRQVHD---E--M-GVTSVFVTHDQEEALEVADRVL------VLHEGNVEQFGT--PEEVYEKPGTLF----------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 72.2931%-103 - C1 -1Z47 ? B:[14-241] --------------TIEFVGVEKIYPGG----A----RSVRGVSFQIREGEMVGLLGPSGSGKTTILRLI-AGLER-PT---KG----------DV---WIG-------G-----------KRV-----TDLPPQ----KR---NV---------GLVFQN--Y---------ALFQHMTVYDNVSFG-LR---EKRV-PKDEMDARVRELL-----RFM-----------RL-----------ESY-------ANRFPHELSGGQQQRVALARALA------PRPQVLLFDEPFAAID-TQIRRELRTFVRQVHD---E--M-GVTSVFVTHDQEEALEVADRVL------VLHEGNVEQFGT--PEEVYEKPGTLF----------------------------------------------------------------------------------------------------
49 HHSearch 71.1925%-109 * C1 *3TUI METN_ECOLI C:[23-254] -------------HMIKLSNIT-KVFHQGTRTI----QALNNVSLHVPAGQIYGVIGASGAGKSTLIRCV-NL-LERPT---EG----------SVLVDGQE-------LTTLSESELTKARRQ-----IGMIFQHFNLLS---SR-----------TVFG--N-------VALPLELDNTP--------K---DEVK-RR--VTE---LLS-----LVG-----------LG-----------DKH-------DSYP-SNLSGGQKQRVAIARALA------SNPKVLLCDQATSALD-PA---TTRSILELLKDI-NRR-L-GLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFS--H---------------------------------------------------------------------------------------------------------------
57 HHSearch 70.3428% -98 - C1 -3WMG ? A:[348-582] ------------KQGIVFENVH-FRYPTRMN-V----EVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLL-MR-FYDIEPQGGG----------LLLFDGTP-------AWNYDFHAL---RSQ-----IGLVSQEPVLFS---G------------TIRD--N-------ILYGKRDAT-----------------D-EE--VIQ---ALR-----EANAYSFVMALPDGLD-----------TEV-------GERG-LALSGGQKQRIAIARAIL------KHPTLLCLDESTSALD-AE---SEALVQEALDRM-MAS-D-GVTSVVIAHRLSTV-ARADLILVMQDGVVVEQGNHSELMA--L---------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 69.9127% -94 - C1 -4QC2 ? A:[15-234] ---------------------------G----R----RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMV-VG-IV-PR---DAGNIIIDDDDISLLPLHAR-------A-----------RRG-----IGYLPQEASIFR--------------RLSVYD--N-------LMAVLQIRDDL----SA-EQ---REDR-A----NE---LME-----EFH-----------IE-----------HLR-------DSMG-QSLSGGERRRVEIARALA------ANPKFILLDEPFAGVD-PI---SVIDIKRIIEHL-RD--S-GLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ--DEHVK----RVY----------------------------------------------------------------------------------------------------
39 Fugue 69.3524% -89 - C1 -3TUZ METN_ECOLI H:[23-362] -------------HMIKLSNIT-KVFHQ----GTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLL-ER-PT---EG----------SVLVD--G-------Q-----------ELT-----TLSESELTKARR---QI---------GMIFQH--FNLLSSRTVFGNVALPLEL----DN-TPK--DEVK-RR--VTE---LLS-----LVG-----------LG-----------DKH-------DSYP-SNLSGGQKQRVAIARALA------SNPKVLLCDQATSALD-PA---TTRSILELLKDI-NR--RLGLTILLITHEMDVVKRICDCVAVISN-GELIEQDTVSEVFSHPKTPL----AQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV
58 HHSearch 69.1628% -98 - C1 -3ZDQ - ABCBA_HUMAN A:[338-571] -----------FQGALEFKNVH-FAYPARPE-V----PIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLL-LR-LYDPA---SG----------TISLDGHD-------IRQLNPVWL---RSK-----IGTVSQEPILFS---C------------SIAE--N-------IAYGADDPSS--------------VTA-EE--IQR---VAE-----VAN-----------AVAFIRNFPQGFNTVV-------GEKG-VLLSGGQKQRIAIARALL------KNPKILLLDEATSALD-AE---NEYLVQEALDRL-M---D-GRTVLVIAHRLSTI-KNANMVAVLDQGKITEYGKHEELLS--K---------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 69.1227% -93 - C1 -4P32 LPTB_ECOLI A:[14-233] ---------------------------G----R----RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMV-VG-IV-PR---DAGNIIIDDDDISLLPLHAR-------A-----------RRG-----IGYLPQEASIFR--------------RLSVYD--N-------LMAVLQIRDDL----SA-EQ---REDR-A----NE---LME-----EFH-----------IE-----------HLR-------DSMG-QSLSGGERRRVEIARALA------ANPKFILLDEPFAGVD-PI---SVIDIKRIIEHL-RD--S-GLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ--DEHVK----RVY----------------------------------------------------------------------------------------------------
65 HHSearch 67.1825%-111 - C1 -2IHY ? A:[19-261] ------------HMLIQLDQIG-RMKQG----K----TILKKISWQIAKGDKWILYGLNGAGKTTLLNIL-NA-YEPAT---SG----------TVNLFGKMPGYSAETV-----------RQH-----IGFVSHSLLEKF---QE---------GERVID--V-------VISGA-------------ID---DEIR-NE--AHQ---LLK-----LVG-----------MS-----------AKA-------QQYI-GYLSTGEKQRVMIARALM------GQPQVLILDEPAAGLD-FI---ARESLLSILDSL-SDSYP-TLAMIYVTHFIEEITANFSKILLLKDGQSIQQGAVEDILT--SENMS----RFFQ---------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 67.1226% -94 - C1 -4P33 LPTB_ECOLI A:[14-233] ---------------------------G----R----RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMV-VG-IV-PR---DAGNIIIDDDDISLLPLHAR-------A-----------RRG-----IGYLPQEASIFR--------------RLSVYD--N-------LMAVLQIRDDL----SA-EQ---REDR-A----NE---LME-----EFH-----------IE-----------HLR-------DSMG-QSLSGGERRRVEIARALA------ANPKFILLDQPFAGVD-PI---SVIDIKRIIEHL-RD--S-GLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ--DEHVK----RVY----------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 67.1230% -93 - C1 -4HLU ECFA2_THEMA A:[22-222] --------------------------------K----KALENVSLVINEGECLLVAGNTGSGKSTLLQIV-AG-LIEPT---SG----------DVLYDGER-------K-----------KGYEIRRNIGIAFQYPEDQF---FA---------ERVFDE--V-------AFAVKNFYP----------D---RDPV-PL--VKK---AME-----FVG-----------LDFD---------SFK-------DRVP-FFLSGGEKRRVAIASVIV------HEPDILILDEPLVGLD-RE---GKTDLLRIVEKW-KT--L-GKTVILISHDIETVINHVDRVVVLEKGKKVFDG-------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 67.0927% -98 - C1 -2YYZ ? A:[2-209] -------------PSIRVVNLK-KYFGK----V----KAVDGVSFEVKDGEFVALLGPSGCGKTTTLLML-AGIYK-PT---SG----------EIYFD----------------------DVL-----VNDIPPKY---R---EV---------GMVFQN--Y---------ALYPHMTVF----EN-IAFPLRARR-IS--KDE---VEK-----RVV-----------EI-----------ARKLLIDNLLDRKP-TQLSGGQQQRVALARALV------KQPKVLLFDEPLSNLD-AN---LRMIMRAEIKHL-QQ--ELGITSVYVTHDQAEAMTMASRIAVFNQ--------------------------------------------------------------------------------------------------------------------------------
51 HHSearch 66.8627%-101 - C1 -2YYZ ? A:[2-224] -------------PSIRVVNLK-KYFGK----V----KAVDGVSFEVKDGEFVALLGPSGCGKTTTLLML-AG-IYKPT---SG----------EIYFDDVL-------VNDIPPK-----YRE-----VGMVFQNYALYP---HM-----------TVFE--N-------IAFPLRARRIS--------K---DEVE-KR--VVE---IAR-----KLL-----------ID-----------NLL-------DRKP-TQLSGGQQQRVALARALV------KQPKVLLFDEPLSNLD-AN---LRMIMRAEIKHL-QQE-L-GITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYD--S---------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 65.9633% -85 - C1 -4HUQ - ECFA1_LACBA B:[23-227] ---------------------------------------LTDVSFTVHAGEWLAIVGHNGSGKSTLAKSL-DG-LL-PFT--QG----------SVTV------------------------GG-----ITLTPETVWQVREQIGM---------IFQNPDNQF-------VGATVEDDVAFGLENRQ-IS---RDEMVPR--VQA---ALA-----QVG-----------MT-----------SFA-------QREP-SSLSGGQKQRVALAGIVA------IAPKILILDEATSMLDPQG---RIEMLAIVRQLR-QQ--Q-NLTVISITHDIDEAAS-ADRVLVIDD-GRLVDEAVPSQI-------------------------------------------------------------------------------------------------------------------
54 HHSearch 65.9027%-108 - C1 -3D31 - ? A:[1-217] --------------MIEIESLS-RKWK-----N----FSLDNLSLKVESGEYFVILGPTGAGKTLFLELI-AG-FHVPD---SG----------RILLDGKD-------VTDLSPE-----KHD-----IAFVYQNYSLFP---HM-----------NVKK--N-------LEFGMRMKKI--------------KDP-KR--VLD---TAR-----DLK-----------IE-----------HLL-------DRNP-LTLSGGEQQRVALARALV------TNPKILLLDEPLSALD-PR---TQENAREMLSVL-HKK-N-KLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFE------------------------------------------------------------------------------------------------------------------
52 HHSearch 64.9524%-115 - C1 -3RLF MALK_ECOLI A:[2-223] -------------ASVQLQNVT-KAWGE----V----VVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMI-AG-LETIT---SG----------DLFIGEKR-------MNDTPPA-----ERG-----VGMVFQSYALYP---HL-----------SVAE--N-------MSFGLKLAGAK--------K---EVIN-QR--VNQ---VAE-----VLQ-----------LA-----------HLL-------DRKP-KALSGGQRQRVAIGRTLV------AEPSVFLLDEPLSNLD-AA---LRVQMRIEISRL-HKR-L-GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 64.8229%-115 - C1 -2NQ2 - Y1470_HAEIN C:[20-225] --------------------------------------LFQQLNFDLNKGDILAVLGQNGCGKSTLLDLL-LGIHR-PI---QG----------KIEVYQ-----------------------S-----IGFVPQF--FSS---PF---------AYSVLD--I-------V--LMGRSTHI----NT-FA---KPKS-HD--YQV---AMQALDYLNLT-----------HL-----------AKR---------EF-TSLSGGQRQLILIARAIA------SECKLILLDEPTSALD-LA---NQDIVLSLLIDL-AQ--SQNMTVVFTTHQPNQVVAIANKTLLLNK-QNFKFGETRNILT--SENLT----ALF----------------------------------------------------------------------------------------------------