@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA3005: (2016-02-13 )
MQGSLMLDIGGTWLTAEDRQILRHPEVGGLIIFARNIEHPAQVRELCAAIRAIRPDLLLAVDQEGGRVQRLRQGFVRLPAMRAIADNPNAEELAEHCGWLMATEVQAVGLDLSFAPVLDLDHQRSAVVGSRAFEGDPERAALLAGAFIRGMHAAGMAATGKHFPGHGWAEADSHVAIPEDARSLEEIRRSDLVPFARLAGQLDALMPAHVIYPQVDPQPAGFSRRWLQEILRGELKFDGVIFSDDLSMAGAHVVGDAASRIEAALAAGCDMGLVCNDRASAELALAALQRLKVTPPSRLQRMRGKGYANTDYRQQPRWLEALSALRAAQLID
Atome Classification :
(22 SA)
----------------------------------.........10....-----------....20........30........40........50--..-...--...60........70.-.-....-..-80...-----.-----..-..90---..---.......100.......110.......120.-.....-.130-----.........140.......150.......160.......170.......180.......190...-...--.200...----.....210....-.-------------.-.220.......230.......240.......250.......260.......270.......280........-290.......300...---.-...310.........320.......330---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
----------------------------------MQG
S
L
M
L
D
IGG
T
W
LT-----------AE
D
R
Q
I
LRHPEVG
G
L
I
I
F
ARNIE
H
P
A
Q
V
R
E
L
C
A
A
I
R
--AI-RP
D
--
L
L
L
A
VDQEG
G
R
V
Q
R
L
R
-
Q
-
G
F
V
R-L
P
-
A
M
R
AI-----A-----DN-P
N
A
----
E
E
---
L
A
E
HC
G
W
L
M
A
T
E
V
Q
A
VGLD
L
S
F
A
P
V
LDLDHQ-
R
S
A
VV-GS-------RAFEG
D
P
E
R
A
A
L
L
A
G
A
F
I
R
G
M
HAAGMAATGKHFPGHGWAEADSHVAI
P
E
D
A
R
S
L
E
E
I
R
R
SDL
V
P
F
-
A
R
L
--
A
G
Q
-
L
D
A
----LMPA
H
V
IYPQVD-P-------------Q-PAG
F
S
R
R
W
L
Q
E
I
L
RGE
L
K
FD
G
V
I
FSDDLSMAG
A
H
VVG
D
A
A
S
R
I
E
A
A
L
AAGCDM
G
L
V
CNDRA
S
-
A
E
L
A
L
A
A
L
Q
-RLKVT
P
P
S
R
L
Q
R
M
RGK---G-YANT--DYRQQ
P
R
W
L
E
A
L
S
A
L
R
A
A
QLID---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
PsiBlast_CBE
98.45
50%
-93
- C6 -
4GNV
4
?
B:
[14-348]
------------------------------------
G
P
V
M
L
D
V
V
G
T
T
L
S
-----------
R
D
D
A
R
R
L
A
H
P
N
T
G
G
V
I
L
F
A
R
H
F
Q
N
R
A
Q
L
T
A
L
T
D
S
I
R
--
A
V
-
R
E
D
--
I
L
I
A
V
D
H
E
G
G
R
V
Q
R
F
R
-
T
D
G
F
T
V
-
L
P
-
A
M
R
R
L
-----
G
E
L
W
D
R
D
V
-
L
L
A
----
T
K
---
V
A
T
A
V
G
Y
I
L
A
A
E
L
R
A
C
G
I
D
M
S
F
T
P
V
L
D
L
D
Y
G
-
H
S
K
V
I
-
G
D
-------
R
A
F
H
R
D
P
R
V
V
T
L
L
A
K
S
L
N
H
G
L
S
L
A
G
M
A
N
C
G
K
H
F
P
G
H
G
F
A
E
A
D
S
H
V
A
L
P
T
D
D
R
T
L
D
A
I
L
E
Q
D
V
A
P
Y
-
D
W
L
--
G
L
S
-
L
A
A
----
V
I
P
A
H
V
I
Y
T
Q
V
D
-
K
-------------
R
-
P
A
G
F
S
R
V
W
L
Q
D
I
L
R
G
K
L
G
F
T
G
A
I
F
S
D
D
L
S
M
E
A
A
R
E
--
T
L
T
Q
A
A
D
A
A
L
A
A
G
C
D
M
V
L
V
C
N
Q
P
D
A
-
A
E
V
V
L
N
G
L
K
A
R
A
S
A
E
S
V
R
R
I
K
R
M
R
A
R
---
G
-
K
A
L
K
W
D
K
L
I
A
Q
P
E
Y
L
Q
A
Q
A
L
L
S
S
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
PsiBlast_CBE
98.40
50%
-92
- C6 -
4MSS
3
?
B:
[14-348]
------------------------------------
G
P
V
M
L
D
V
V
G
T
T
L
S
-----------
R
D
D
A
R
R
L
A
H
P
N
T
G
G
V
I
L
F
A
R
H
F
Q
N
R
A
Q
L
T
A
L
T
D
S
I
R
--
A
V
-
R
E
D
--
I
L
I
A
V
D
H
E
G
G
R
V
Q
R
F
R
-
T
D
G
F
T
V
-
L
P
-
A
M
R
R
L
-----
G
ELWDR
D
V
-
L
L
A
----
T
K
---
V
A
T
A
V
G
Y
I
L
A
A
E
L
R
A
C
G
I
D
M
S
F
T
P
V
L
D
L
D
Y
G
-
H
S
K
V
I
-
G
D
-------
R
A
F
H
R
D
P
R
V
V
T
L
L
A
K
S
L
N
H
G
L
S
L
A
G
M
A
N
C
G
K
H
F
P
G
H
G
F
A
E
A
D
S
H
V
A
L
P
T
D
D
R
T
L
D
A
I
L
E
Q
D
V
A
P
Y
-
D
W
L
--
G
L
S
-
L
A
A
----
V
I
P
A
H
V
I
Y
T
Q
V
D
-
K
-------------
R
-
P
A
G
F
S
R
V
W
L
Q
D
I
L
R
G
K
L
G
F
T
G
A
I
F
S
D
D
L
S
M
E
A
A
R
E
G
G
T
L
T
Q
A
A
D
A
A
L
A
A
G
C
D
M
V
L
V
C
N
Q
P
D
A
-
A
E
V
V
L
N
G
L
K
A
R
A
S
A
E
S
V
R
R
I
K
R
M
R
A
R
---
G
-
K
A
L
K
WD
K
L
I
A
Q
P
E
Y
L
Q
A
Q
A
L
L
S
S
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
97.55
50%
-96
- C6 -
4G6C
-
?
A:
[6-340]
------------------------------------
G
P
V
M
L
D
V
V
G
T
T
L
S
-----------
R
D
D
A
R
R
L
A
H
P
N
T
G
G
V
I
L
F
A
R
H
F
Q
N
R
A
Q
L
T
A
L
T
D
S
I
R
--
A
V
-
R
E
D
--
I
L
I
A
V
D
H
E
G
G
R
V
Q
R
F
R
-
T
D
G
F
T
V
-
L
P
-
A
M
R
R
L
-----
G
E
L
W
D
R
D
V
-
L
L
A
----
T
K
---
V
A
T
A
V
G
Y
I
L
A
A
E
L
R
A
C
G
I
D
M
S
F
T
P
V
L
D
L
D
Y
G
-
H
S
K
V
I
-
G
D
-------
R
A
F
H
R
D
P
R
V
V
T
L
L
A
K
S
L
N
H
G
L
S
L
A
G
M
A
N
C
G
K
H
F
P
G
H
G
F
A
E
A
----
A
L
P
T
D
D
R
T
L
D
A
I
L
E
Q
D
V
A
P
Y
-
D
W
L
--
G
L
S
-
L
A
A
----
V
I
P
A
H
V
I
Y
T
Q
V
D
-
K
-------------
R
-
P
A
G
F
S
R
V
W
L
Q
D
I
L
R
G
K
L
G
F
T
G
A
I
F
S
D
D
L
S
M
E
A
A
R
E
G
G
T
L
T
Q
A
A
D
A
A
L
A
A
G
C
D
M
V
L
V
C
N
Q
P
D
A
-
A
E
V
V
L
N
G
L
K
A--
S
A
E
S
V
R
R
I
K
R
M
R
A
R
---
G
-
K
A
L
K
W
D
K
L
I
A
Q
P
E
Y
L
Q
A
Q
A
L
L
S
S
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
97.45
50%
-91
- C6 -
4GNV
5
?
A:
[14-348]
------------------------------------
G
P
V
M
L
D
V
V
G
T
T
L
S
-----------
R
D
D
A
R
R
L
A
H
P
N
T
G
G
V
I
L
F
A
R
H
F
Q
N
R
A
Q
L
T
A
L
T
D
S
I
R
--
A
V
-
R
E
D
--
I
L
I
A
V
D
H
E
G
G
R
V
Q
R
F
R
-
T
D
G
F
T
V
-
L
P
-
A
M
R
R
L
-----
G
E
L
W
D
R
D
V
-
L
L
A
----
T
K
---
V
A
T
A
V
G
Y
I
L
A
A
E
L
R
A
C
G
I
D
M
S
F
T
P
V
L
D
L
D
Y
G
-
H
S
K
V
I
-
G
D
-------
R
A
F
H
R
D
P
R
V
V
T
L
L
A
K
S
L
N
H
G
L
S
L
A
G
M
A
N
C
G
K
H
F
P
G
H
G
F
A
E
A
D
S
H
V
A
L
P
T
D
D
R
T
L
D
A
I
L
E
Q
D
V
A
P
Y
-
D
W
L
--
G
L
S
-
L
A
A
----
V
I
P
A
H
V
I
Y
T
Q
V
D
-
K
-------------
R
-
P
A
G
F
S
R
V
W
L
Q
D
I
L
R
G
K
L
G
F
T
G
A
I
F
S
D
D
L
S
M
E
A
A
R
---
T
L
T
Q
A
A
D
A
A
L
A
A
G
C
D
M
V
L
V
C
N
Q
P
D
A
-
A
E
V
V
L
N
G
L
K
A
R
A
S
A
E
S
V
R
R
I
K
R
M
R
A
R
---
G
-
K
A
L
K
W
D
K
L
I
A
Q
P
E
Y
L
Q
A
Q
A
L
L
S
S
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
96.91
50%
-96
- C6 -
4GVF
1
NAGZ_SALTY
A:
[2-327]
------------------------------------
G
P
V
M
L
N
V
E
G
C
E
L
D
-----------
A
E
E
R
E
I
L
A
H
P
L
V
G
G
L
I
L
F
T
R
N
Y
H
D
P
E
Q
L
R
E
L
V
R
Q
I
R
--
A
A
S
R
N
H
--
L
V
V
A
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
T
R
-
L
P
-
A
A
Q
S
F
-----
F
-----
A
L
-
H
G
L
----
E
E
G
G
R
L
A
Q
E
A
G
W
L
M
A
S
E
M
I
A
M
D
I
D
I
S
F
A
P
V
L
D
V
G
H
I
--
S
A
A
I
-
G
E
-------
R
S
Y
H
A
D
P
A
K
A
L
A
M
A
T
R
F
I
D
G
M
H
D
A
G
M
K
T
T
G
K
H
F
P
G
H
G
A
V
T
A
D
S
H
K
E
T
P
C
D
P
R
P
E
T
D
I
R
G
K
D
M
S
V
F
-
R
T
L
I
S
E
N
K
-
L
D
A
----
I
M
P
A
H
V
I
Y
R
A
I
D
-
P
-------------
R
-
P
A
S
G
S
P
Y
W
L
K
T
V
L
R
Q
E
L
G
F
D
G
V
I
F
S
D
D
L
S
M
E
G
A
A
I
M
G
S
Y
A
E
R
A
Q
A
S
L
D
A
G
C
D
M
I
L
V
C
N
N
R
K
G
----
A
V
S
V
L
D
-
N
L
S
P
I
K
A
E
R
V
T
R
L
Y
H
K
---
G
S
F
S
R
R
--
E
L
M
D
S
A
R
W
K
T
A
S
A
Q
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
96.88
50%
-96
- C6 -
4GVH
2
NAGZ_SALTY
A:
[2-327]
------------------------------------
G
P
V
M
L
N
V
E
G
C
E
L
D
-----------
A
E
E
R
E
I
L
A
H
P
L
V
G
G
L
I
L
F
T
R
N
Y
H
D
P
E
Q
L
R
E
L
V
R
Q
I
R
--
A
A
S
R
N
H
--
L
V
V
A
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
T
R
-
L
P
-
A
A
Q
S
F
-----
F
-----
A
L
-
H
G
L
----
E
E
G
G
R
L
A
Q
E
A
G
W
L
M
A
S
E
M
I
A
M
D
I
D
I
S
F
A
P
V
L
D
V
G
H
I
--
S
A
A
I
-
G
E
-------
R
S
Y
H
A
D
P
A
K
A
L
A
M
A
T
R
F
I
D
G
M
H
D
A
G
M
K
T
T
G
K
H
F
P
G
H
G
A
V
T
A
D
S
H
K
E
T
P
C
D
P
R
P
E
T
D
I
R
G
K
D
M
S
V
F
-
R
T
L
I
S
E
N
K
-
L
D
A
----
I
M
P
A
H
V
I
Y
R
A
I
D
-
P
-------------
R
-
P
A
S
G
S
P
Y
W
L
K
T
V
L
R
Q
E
L
G
F
D
G
V
I
F
S
D
D
L
S
M
E
G
A
A
I
M
G
S
Y
A
E
R
A
Q
A
S
L
D
A
G
C
D
M
I
L
V
C
N
N
R
K
G
----
A
V
S
V
L
D
-
N
L
S
P
I
K
A
E
R
V
T
R
L
Y
H
K
---
G
S
F
S
R
R
--
E
L
M
D
S
A
R
W
K
T
A
S
A
Q
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
PsiBlast_CBE
96.45
50%
-98
- C6 -
4GVF
2
NAGZ_SALTY
B:
[2-327]
------------------------------------
G
P
V
M
L
N
V
E
G
C
E
L
D
-----------
A
E
E
R
E
I
L
A
H
P
L
V
G
G
L
I
L
F
T
R
N
Y
H
D
P
E
Q
L
R
E
L
V
R
Q
I
R
--
A
A
S
R
N
H
--
L
V
V
A
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
T
R
-
L
P
-
A
A
Q
S
F
-----
F
-----
A
L
-
H
G
L
----
E
E
G
G
R
L
A
Q
E
A
G
W
L
M
A
S
E
M
I
A
M
D
I
D
I
S
F
A
P
V
L
D
V
G
H
I
--
S
A
A
I
-
G
E
-------
R
S
Y
H
A
D
P
A
K
A
L
A
M
A
T
R
F
I
D
G
M
H
D
A
G
M
K
T
T
G
K
H
F
P
G
H
G
A
V
T
-----
E
T
P
C
D
P
R
P
E
T
D
I
R
G
K
D
M
S
V
F
-
R
T
L
I
S
E
N
K
-
L
D
A
----
I
M
P
A
H
V
I
Y
R
A
I
D
-
P
-------------
R
-
P
A
S
G
S
P
Y
W
L
K
T
V
L
R
Q
E
L
G
F
D
G
V
I
F
S
D
D
L
S
--------
S
Y
A
E
R
A
Q
A
S
L
D
A
G
C
D
M
I
L
V
C
N
N
R
K
G
----
A
V
S
V
L
D
-
N
L
S
P
I
K
A
E
R
V
T
R
L
Y
H
K
---
G
S
F
S
R
R
--
E
L
M
D
S
A
R
W
K
T
A
S
A
Q
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
PsiBlast_CBE
96.37
50%
-100
- C6 -
4GVH
1
NAGZ_SALTY
B:
[2-327]
------------------------------------
G
P
V
M
L
N
V
E
G
C
E
L
D
-----------
A
E
E
R
E
I
L
A
H
P
L
V
G
G
L
I
L
F
T
R
N
Y
H
D
P
E
Q
L
R
E
L
V
R
Q
I
R
--
A
A
S
R
N
H
--
L
V
V
A
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
T
R
-
L
P
-
A
A
Q
S
F
-----
F
-----
A
L
-
H
G
L
----
E
E
G
G
R
L
A
Q
E
A
G
W
L
M
A
S
E
M
I
A
M
D
I
D
I
S
F
A
P
V
L
D
V
G
H
I
--
S
A
A
I
-
G
E
-------
R
S
Y
H
A
D
P
A
K
A
L
A
M
A
T
R
F
I
D
G
M
H
D
A
G
M
K
T
T
G
K
H
F
P
G
H
G
A
V
T
-----
E
T
P
C
D
P
R
P
E
T
D
I
R
G
K
D
M
S
V
F
-
R
T
L
I
S
E
N
K
-
L
D
A
----
I
M
P
A
H
V
I
Y
R
A
I
D
-
P
-------------
R
-
P
A
S
G
S
P
Y
W
L
K
T
V
L
R
Q
E
L
G
F
D
G
V
I
F
S
D
D
L
S
--------
S
Y
A
E
R
A
Q
A
S
L
D
A
G
C
D
M
I
L
V
C
N
N
R
K
G
----
A
V
S
V
L
D
-
N
L
S
P
I
K
A
E
R
V
T
R
L
Y
H
K
---
G
S
F
S
R
R
--
E
L
M
D
S
A
R
W
K
T
A
S
A
Q
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
96.24
50%
-95
- C6 -
4GVG
1
NAGZ_SALTY
A:
[2-327]
------------------------------------
G
P
V
M
L
N
V
E
G
C
E
L
D
-----------
A
E
E
R
E
I
L
A
H
P
L
V
G
G
L
I
L
F
T
R
N
Y
H
D
P
E
Q
L
R
E
L
V
R
Q
I
R
--
A
A
S
R
N
H
--
L
V
V
A
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
T
R
-
L
P
-
A
A
Q
S
F
-----
F
-----
A
L
-
H
G
L
----
E
E
G
G
R
L
A
Q
E
A
G
W
L
M
A
S
E
M
I
A
M
D
I
D
I
S
F
A
P
V
L
D
V
G
H
I
--
S
A
A
I
-
G
E
-------
R
S
Y
H
A
D
P
A
K
A
L
A
M
A
T
R
F
I
D
G
M
H
D
A
G
M
K
T
T
G
K
H
F
P
G
H
G
A
V
T
---
H
K
E
T
P
C
D
P
R
P
E
T
D
I
R
G
K
D
M
S
V
F
-
R
T
L
I
S
E
N
K
-
L
D
A
----
I
M
P
A
H
V
I
Y
R
A
I
D
-
P
-------------
R
-
P
A
S
G
S
P
Y
W
L
K
T
V
L
R
Q
E
L
G
F
D
G
V
I
F
S
D
D
L
S
------
M
G
S
Y
A
E
R
A
Q
A
S
L
D
A
G
C
D
M
I
L
V
C
N
N
R
K
G
----
A
V
S
V
L
D
-
N
L
S
P
I
K
A
E
R
V
T
R
L
Y
H
K
---
G
S
F
S
R
R
--
E
L
M
D
S
A
R
W
K
T
A
S
A
Q
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
96.17
50%
-96
- C6 -
4HZM
2
NAGZ_SALTY
B:
[2-327]
------------------------------------
G
P
V
M
L
N
V
E
G
C
E
L
D
-----------
A
E
E
R
E
I
L
A
H
P
L
V
G
G
L
I
L
F
T
R
N
Y
H
D
P
E
Q
L
R
E
L
V
R
Q
I
R
--
A
A
S
R
N
H
--
L
V
V
A
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
T
R
-
L
P
-
A
A
Q
S
F
-----
F
-----
A
L
-
H
G
L
----
E
E
G
G
R
L
A
Q
E
A
G
W
L
M
A
S
E
M
I
A
M
D
I
D
I
S
F
A
P
V
L
D
V
G
H
I
--
S
A
A
I
-
G
E
-------
R
S
Y
H
A
D
P
A
K
A
L
A
M
A
T
R
F
I
D
G
M
H
D
A
G
M
K
T
T
G
K
H
F
P
G
H
G
A
V
T
-----
E
T
P
C
D
P
R
P
E
T
D
I
R
G
K
D
M
S
V
F
-
R
T
L
I
S
E
N
K
-
L
D
A
----
I
M
P
A
H
V
I
Y
R
A
I
D
-
P
-------------
R
-
P
A
S
G
S
P
Y
W
L
K
T
V
L
R
Q
E
L
G
F
D
G
V
I
F
S
D
D
L
S
------
M
G
S
Y
A
E
R
A
Q
A
S
L
D
A
G
C
D
M
I
L
V
C
N
N
R
K
G
----
A
V
S
V
L
D
-
N
L
S
P
I
K
A
E
R
V
T
R
L
Y
H
K
---
G
S
F
S
R
R
--
E
L
M
D
S
A
R
W
K
T
A
S
A
Q
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
PsiBlast_CBE
96.07
50%
-96
- C6 -
4GVG
1
NAGZ_SALTY
B:
[2-327]
------------------------------------
G
P
V
M
L
N
V
E
G
C
E
L
D
-----------
A
E
E
R
E
I
L
A
H
P
L
V
G
G
L
I
L
F
T
R
N
Y
H
D
P
E
Q
L
R
E
L
V
R
Q
I
R
--
A
A
S
R
N
H
--
L
V
V
A
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
T
R
-
L
P
-
A
A
Q
S
F
-----
F
-----
A
L
-
H
G
L
----
E
E
G
G
R
L
A
Q
E
A
G
W
L
M
A
S
E
M
I
A
M
D
I
D
I
S
F
A
P
V
L
D
V
G
H
I
--
S
A
A
I
-
G
E
-------
R
S
Y
H
A
D
P
A
K
A
L
A
M
A
T
R
F
I
D
G
M
H
D
A
G
M
K
T
T
G
K
H
F
P
G
H
G
A
V
T
-----
E
T
P
C
D
P
R
P
E
T
D
I
R
G
K
D
M
S
V
F
-
R
T
L
I
S
E
N
K
-
L
D
A
----
I
M
P
A
H
V
I
Y
R
A
I
D
-
P
-------------
R
-
P
A
S
G
S
P
Y
W
L
K
T
V
L
R
Q
E
L
G
F
D
G
V
I
F
S
D
D
L
S
------
M
G
S
Y
A
E
R
A
Q
A
S
L
D
A
G
C
D
M
I
L
V
C
N
N
R
K
G
----
A
V
S
V
L
D
-
N
L
S
P
I
K
A
E
R
V
T
R
L
Y
H
K
---
G
S
F
S
R
R
--
E
L
M
D
S
A
R
W
K
T
A
S
A
Q
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
PsiBlast_CBE
96.01
50%
-94
- C6 -
4GVI
3
NAGZ_SALTY
B:
[2-327]
------------------------------------
G
P
V
M
L
N
V
E
G
C
E
L
D
-----------
A
E
E
R
E
I
L
A
H
P
L
V
G
G
L
I
L
F
T
R
N
Y
H
D
P
E
Q
L
R
E
L
V
R
Q
I
R
--
A
A
S
R
N
H
--
L
V
V
A
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
T
R
-
L
P
-
A
A
Q
S
F
-----
F
-----
A
L
-
H
G
L
----
E
E
G
G
R
L
A
Q
E
A
G
W
L
M
A
S
E
M
I
A
M
D
I
D
I
S
F
A
P
V
L
D
V
G
H
I
--
S
A
A
I
-
G
E
-------
R
S
Y
H
A
D
P
A
K
A
L
A
M
A
T
R
F
I
D
G
M
H
D
A
G
M
K
T
T
G
K
H
F
P
G
H
G
A
V
T
---
H
K
E
T
P
C
D
P
R
P
E
T
D
I
R
G
K
D
M
S
V
F
-
R
T
L
I
S
E
N
K
-
L
D
A
----
I
M
P
A
H
V
I
Y
R
A
I
D
-
P
-------------
R
-
P
A
S
G
S
P
Y
W
L
K
T
V
L
R
Q
E
L
G
F
D
G
V
I
F
S
N
D
L
S
------
M
G
S
Y
A
E
R
A
Q
A
S
L
D
A
G
C
D
M
I
L
V
C
N
N
R
K
G
----
A
V
S
V
L
D
-
N
L
S
P
I
K
A
E
R
V
T
R
L
Y
H
K
---
G
S
F
S
R
R
--
E
L
M
D
S
A
R
W
K
T
A
S
A
Q
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
95.85
50%
-98
- C6 -
4HZM
1
NAGZ_SALTY
A:
[2-327]
------------------------------------
G
P
V
M
L
N
V
E
G
C
E
L
D
-----------
A
E
E
R
E
I
L
A
H
P
L
V
G
G
L
I
L
F
T
R
N
Y
H
D
P
E
Q
L
R
E
L
V
R
Q
I
R
--
A
A
S
R
N
H
--
L
V
V
A
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
T
R
-
L
P
-
A
A
Q
S
F
-----
F
-----
A
L
-
H
G
L
----
E
E
G
G
R
L
A
Q
E
A
G
W
L
M
A
S
E
M
I
A
M
D
I
D
I
S
F
A
P
V
L
D
V
G
H
I
--
S
A
A
I
-
G
E
-------
R
S
Y
H
A
D
P
A
K
A
L
A
M
A
T
R
F
I
D
G
M
H
D
A
G
M
K
T
T
G
K
H
F
P
G
H
G
A
V
T
---
H
K
E
T
P
C
D
P
R
P
E
T
D
I
R
G
K
D
M
S
V
F
-
R
T
L
I
S
E
N
K
-
L
D
A
----
I
M
P
A
H
V
I
Y
R
A
I
D
-
P
-------------
R
-
P
A
S
G
S
P
Y
W
L
K
T
V
L
R
Q
E
L
G
F
D
G
V
I
F
S
D
D
L
S
------
M
G
S
Y
A
E
R
A
Q
A
S
L
D
A
G
C
D
M
I
L
V
C
N
N
R
K
G
----
A
V
S
V
L
D
-
N
L
S
P
I
K
A
E
R
V
T
R
L
Y
H
K
---
G
S
F
S
R
R
--
E
L
M
D
S
A
R
W
K
T
A
S
A
Q
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
92.27
48%
-89
- C6 -
1Y65
1
NAGZ_VIBCH
A:
[4-324]
------------------------------------
G
P
L
W
L
D
V
A
G
Y
E
L
S
-----------
A
E
D
R
E
I
L
Q
H
P
T
V
G
G
V
I
L
F
G
R
N
Y
H
D
N
Q
Q
L
L
A
L
N
K
A
I
R
Q
A
A
K
-
R
P
---
I
L
I
G
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
S
R
-
I
P
-
P
A
Q
Y
Y
-----
A
-----
R
A
-
E
N
G
----
V
E
---
L
A
E
Q
G
G
W
L
M
A
A
E
L
I
A
H
D
V
D
L
S
F
A
P
V
L
D
M
G
F
A
-
C
K
A
I
--
G
N
-------
R
A
F
G
E
D
V
Q
T
V
L
K
H
S
S
A
F
L
R
G
M
K
A
V
G
M
A
T
T
G
K
H
F
P
G
H
G
A
V
I
A
D
S
H
L
E
T
P
Y
D
E
R
---
E
T
I
A
Q
D
M
A
I
F
R
A
Q
I
E
-
A
G
V
-
L
D
A
----
M
M
P
A
H
V
V
Y
P
H
Y
D
-
A
-------------
Q
-
P
A
S
G
S
S
Y
W
L
K
Q
V
L
R
E
E
L
G
F
K
G
I
V
F
S
D
D
L
S
M
E
G
A
A
V
M
G
G
P
V
E
R
S
H
Q
A
L
V
A
G
C
D
M
I
L
I
C
N
K
R
E
A
-
A
V
E
V
L
D
N
L
P
-
I
M
E
V
--
P
Q
A
E
A
L
L
K
K
Q
---
Q
-
F
S
Y
S
--
E
L
K
R
L
E
R
W
Q
Q
A
S
A
N
M
Q
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
91.78
48%
-86
- C6 -
2OXN
1
NAGZ_VIBCH
A:
[2-322]
------------------------------------
G
P
L
W
L
D
V
A
G
Y
E
L
S
-----------
A
E
D
R
E
I
L
Q
H
P
T
V
G
G
V
I
L
F
G
R
N
Y
H
D
N
Q
Q
L
L
A
L
N
K
A
I
R
Q
A
A
K
-
R
P
---
I
L
I
G
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
S
R
-
I
P
-
P
A
Q
Y
Y
-----
A
-----
R
A
-
E
N
G
----
V
E
---
L
A
E
Q
G
G
W
L
M
A
A
E
L
I
A
H
D
V
D
L
S
F
A
P
V
L
D
M
G
F
A
-
C
K
A
I
--
G
N
-------
R
A
F
G
E
D
V
Q
T
V
L
K
H
S
S
A
F
L
R
G
M
K
A
V
G
M
A
T
T
G
K
H
F
P
G
H
G
A
V
I
A
D
S
H
L
E
T
P
Y
D
E
R
---
E
T
I
A
Q
D
M
A
I
F
R
A
Q
I
E
-
A
G
V
-
L
D
A
----
M
M
P
A
H
V
V
Y
P
H
Y
D
-
A
-------------
Q
-
P
A
S
G
S
S
Y
W
L
K
Q
V
L
R
E
E
L
G
F
K
G
I
V
F
S
D
D
L
S
M
E
G
A
A
V
M
G
G
P
V
E
R
S
H
Q
A
L
V
A
G
C
D
M
I
L
I
C
N
K
R
E
A
-
A
V
E
V
L
D
N
L
P
-
I
M
E
V
--
P
Q
A
E
A
L
L
K
K
Q
---
Q
-
F
S
Y
S
--
E
L
K
R
L
E
R
W
Q
Q
A
S
A
N
M
Q
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
91.53
48%
-88
- C6 -
3GS6
3
NAGZ_VIBCH
A:
[2-322]
------------------------------------
G
P
L
W
L
D
V
A
G
Y
E
L
S
-----------
A
E
D
R
A
I
L
A
H
P
T
V
G
G
V
I
L
F
G
R
N
Y
H
D
N
Q
Q
L
L
A
L
N
K
A
I
R
Q
A
A
A
-
R
P
---
I
L
I
G
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
S
R
-
I
P
-
P
A
Q
Y
Y
-----
A
-----
R
A
-
E
N
G
----
V
E
---
L
A
E
Q
G
G
W
L
M
A
A
E
L
I
A
H
D
V
D
L
S
F
A
P
V
L
D
M
G
F
A
-
C
K
A
I
--
G
N
-------
R
A
F
G
E
D
V
Q
T
V
L
K
H
S
S
A
F
L
R
G
M
K
A
V
G
M
A
T
T
G
K
H
F
P
G
H
G
A
V
I
---
H
L
E
T
P
Y
D
E
R
---
E
T
I
A
Q
D
M
A
I
F
R
A
Q
I
E
-
A
G
V
-
L
D
A
----
M
M
P
A
H
V
V
Y
P
H
Y
D
-
A
-------------
Q
-
P
A
S
G
S
S
Y
W
L
K
Q
V
L
R
E
E
L
G
F
K
G
I
V
F
S
D
D
L
S
M
----
V
M
G
G
P
V
E
R
S
H
Q
A
L
V
A
G
C
D
M
I
L
I
C
N
K
R
E
A
-
A
V
E
V
L
D
N
L
P
-
I
M
E
V
--
P
Q
A
E
A
L
L
K
K
Q
---
Q
-
F
S
Y
S
--
E
L
K
R
L
E
R
W
Q
Q
A
S
A
N
M
Q
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
91.42
48%
-91
- C6 -
3GSM
3
NAGZ_VIBCH
A:
[2-322]
------------------------------------
G
P
L
W
L
D
V
A
G
Y
E
L
S
-----------
A
E
D
R
A
I
L
A
H
P
T
V
G
G
V
I
L
F
G
R
N
Y
H
D
N
Q
Q
L
L
A
L
N
K
A
I
R
Q
A
A
A
-
R
P
---
I
L
I
G
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
S
R
-
I
P
-
P
A
Q
Y
Y
-----
A
-----
R
A
-
E
N
G
----
V
E
---
L
A
E
Q
G
G
W
L
M
A
A
E
L
I
A
H
D
V
D
L
S
F
A
P
V
L
D
M
G
F
A
-
C
K
A
I
--
G
N
-------
R
A
F
G
E
D
V
Q
T
V
L
K
H
S
S
A
F
L
R
G
M
K
A
V
G
M
A
T
T
G
K
H
F
P
G
H
G
A
V
I
A
D
-
H
L
E
T
P
Y
D
E
R
---
E
T
I
A
Q
D
M
A
I
F
R
A
Q
I
E
-
A
G
V
-
L
D
A
----
M
M
P
A
H
V
V
Y
P
H
Y
D
-
A
-------------
Q
-
P
A
S
G
S
S
Y
W
L
K
Q
V
L
R
E
E
L
G
F
K
G
I
V
F
S
D
D
L
S
M
----
V
M
G
G
P
V
E
R
S
H
Q
A
L
V
A
G
C
D
M
I
L
I
C
N
K
R
E
A
-
A
V
E
V
L
D
N
L
P
-
I
M
E
V
--
P
Q
A
E
A
L
L
K
K
Q
---
Q
-
F
S
Y
S
--
E
L
K
R
L
E
R
W
Q
Q
A
S
A
N
M
Q
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
HHSearch
90.38
47%
-87
- C6 -
2OXN
1
NAGZ_VIBCH
A:
[2-322]
------------------------------------
G
P
L
W
L
D
V
A
G
Y
E
L
S
-----------
A
E
D
R
E
I
L
Q
H
P
T
V
G
G
V
I
L
F
G
R
N
Y
H
D
N
Q
Q
L
L
A
L
N
K
A
I
R
--
Q
A
A
K
R
P
--
I
L
I
G
V
D
Q
E
G
G
R
V
Q
R
F
R
-
E
-
G
F
S
R
I
P
P
-
A
Q
Y
Y
A
-----
R
-----
A
E
N
G
V
------
E
---
L
A
E
Q
G
G
W
L
M
A
A
E
L
I
A
H
D
V
D
L
S
F
A
P
V
L
D
M
G
F
A
-
C
K
-
A
I
-
G
N
-------
R
A
F
G
E
D
V
Q
T
V
L
K
H
S
S
A
F
L
R
G
M
K
A
V
G
M
A
T
T
G
K
H
F
P
G
H
G
A
V
I
A
D
S
H
L
E
T
P
Y
D
E
R
E
T
---
I
A
Q
D
M
A
I
F
-
R
A
Q
I
-
E
A
G
V
L
D
A
----
M
M
P
A
H
V
V
Y
P
H
Y
D
-
A
-------------
Q
-
P
A
S
G
S
S
Y
W
L
K
Q
V
L
R
E
E
L
G
F
K
G
I
V
F
S
D
D
L
S
M
E
G
A
A
V
M
G
G
P
V
E
R
S
H
Q
A
L
V
A
G
C
D
M
I
L
I
C
N
K
R
E
A
-
A
V
E
V
L
---
D
-
N
L
P
I
M
E
V
P
Q
A
E
A
L
L
K
K
Q
--
Q
-
F
S
Y
S
--
E
L
K
R
L
E
R
W
Q
Q
A
S
A
N
M
Q
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
52
HHSearch
81.64
29%
-87
- C6 -
3SQL
9
?
A:
[21-358]
----------------------------------
I
A
Q
M
I
V
V
R
G
A
G
Y
L
F
D
YERPYPQWEAD
Q
T
T
L
Q
R
W
I
E
A
G
I
G
G
V
I
L
L
G
G
S
---
A
A
E
V
A
Q
K
T
K
Q
L
Q
--
S
W
A
E
I
P
--
L
L
I
A
A
D
I
E
E
G
V
G
Q
R
F
R
---
G
A
T
E
-
F
P
-
P
P
M
A
F
-----
G
-----
E
I
W
R
T
D
P
H
Q
A
I
A
---
L
A
E
T
M
G
A
T
T
A
Q
E
A
L
S
L
G
I
N
W
V
L
A
P
V
L
D
V
N
N
N
-
P
H
N
P
V
I
N
I
-------
R
A
F
G
E
T
P
D
Q
V
S
A
L
G
T
A
F
I
R
G
A
Q
Q
Y
A
V
L
T
T
A
K
H
F
P
G
H
G
D
T
A
T
D
S
H
L
A
L
P
T
I
S
H
D
D
T
R
L
N
T
V
E
L
P
P
F
-
K
A
A
I
-
Q
G
G
-
V
D
A
----
V
M
N
A
H
L
M
I
P
A
W
D
Q
Q
-------------
Y
-
P
A
T
L
S
P
A
I
L
T
G
Q
L
R
H
K
L
G
F
K
G
L
I
V
T
D
A
L
V
M
G
G
I
T
Q
F
A
A
P
D
T
V
V
V
Q
A
I
A
A
G
A
D
I
L
L
M
P
P
D
V
D
G
A
I
I
A
I
E
T
A
I
K
-
T
G
Q
L
-
S
E
S
R
I
Y
E
S
V
E
R
I
W
Q
A
-
K
Q
K
I
--
L
T
A
T
P
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
Fugue
80.95
26%
-78
- C6 -
3BMX
7
NAGZ_BACSU
A:
[26-642]
A
S
A
S
K
R
A
I
D
A
N
Q
I
V
N
R
MS
L
D
E
K
L
G
Q
M
L
M
P
D
FR
N
W
Q
K
E
G
E
S
S
P
Q
A
L
T
K
M
N
-----------
D
E
V
A
S
L
V
K
K
Y
Q
F
G
G
I
I
L
F
A
E
N
V
K
T
T
K
Q
T
V
Q
L
T
D
D
Y
Q
--
K
A
-
S
P
K
IP
L
M
L
S
I
D
Q
E
G
G
I
V
T
R
L
G
-
E
-
G
T
N
F
-
P
G
-
N
M
A
L
G
-----
A
-----
A
R
-
S
------
R
I
---
N
A
Y
Q
T
G
S
I
I
G
K
E
L
S
A
L
G
I
N
T
D
F
S
P
V
V
D
I
N
N
N
P
D
N
P
V
I
-
G
V
-------
R
S
F
S
S
N
R
E
L
T
S
R
L
G
L
Y
T
M
K
G
L
Q
R
Q
D
I
A
S
A
L
K
H
F
P
G
H
G
D
T
D
V
D
S
H
Y
G
L
P
L
V
S
H
G
Q
E
R
L
R
E
V
E
L
Y
P
F
-
Q
K
A
--
I
D
A
G
A
D
M
----
V
M
T
A
H
V
Q
F
P
A
F
D
-
D
T
T
Y
K
S
KLDGSDIL
V
-
P
A
T
L
S
K
K
V
M
T
G
L
L
R
Q
E
M
G
F
N
G
V
I
V
T
D
A
L
N
M
K
A
I
A
D
H
F
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Q
E
E
A
V
V
M
A
V
K
A
G
V
D
I
A
L
M
P
A
S
-
V
T
-
S
L
K
E
E
Q
K
F
A
-
R
V
I
Q
A
L
K
E
A
V
K
N
------------------------
G
D
I
P
E
Q
Q
I
N
N
S
V
E
R
I
I
S
L
K
I
K
R
GMYPARNSDS
T
K
E
K
I
A
K
A
K
K
I
VGS
K
Q
H
L
K
A
E
K
K
L
A
E
K
A
VTVLKNEQHTLPFKPKKG
S
R
I
L
I
V
A
PY
E
E
Q
T
A
S
I
E
Q
T
I
H
D
L
I
K
R
KKI
K
P
V
S
L
S
K
M
N
F
A
SQVFK
T
E
H
E
K
Q
V
K
E
AD
Y
I
I
T
G
S
Y
V
VKNDPVVNDGVIDDTISDSSKWAT
V
F
P
R
A
V
M
K
A
A
L
Q
H
NKP
F
V
L
M
S
L
R
NPYDAANFEEAK
A
L
I
A
VYGF
K
G
Y
A
NGRYLQP
N
I
P
A
G
V
M
A
I
F
GQAKPKGTLP
V
D
I
P
S
VTKPGNTLYPLGYGLNIKTGRPL
18
PsiBlast_PDB
71.40
35%
-76
- C6 -
3SQL
8
?
A:
[86-324]
----------------------------------------------------------------------------------------------------------
L
L
I
A
A
D
I
E
E
G
V
G
Q
R
F
R
---
G
A
T
E
-
F
P
-
P
P
M
A
F
G
E
I
W
R
T
-----
D
P
-
H
Q
A
----
I
A
---
L
A
E
T
M
G
A
T
T
A
Q
E
A
L
S
L
G
I
N
W
V
L
A
P
V
L
D
V
N
N
N
P
H
N
P
V
I
-
N
I
-------
R
A
F
G
E
T
P
D
Q
V
S
A
L
G
T
A
F
I
R
G
A
Q
Q
Y
A
V
L
T
T
A
K
H
F
P
G
H
G
D
T
A
T
D
S
H
L
A
L
P
T
I
S
H
D
D
T
R
L
N
T
V
E
L
P
P
F
K
A
A
I
--
Q
G
G
-
V
D
A
----
V
M
N
A
H
L
M
I
P
A
W
D
-
Q
-------------
Q
Y
P
A
T
L
S
P
A
I
L
T
G
Q
L
R
H
K
L
G
F
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M
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D
G
-
A
I
I
A
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
60.15
34%
-23
- C6 -
5BU9
2
?
A:
[74-301]
----------------------------------------------------------------------------------------------------------
L
L
V
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-----
A
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----
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-
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GAA
F
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A
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Y
S
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I
D
-
P
-------------
D
A
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A
A
F
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I
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L
L
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D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------