@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA3146: (2016-02-14 )
MVTGASGFVGSALCCELARTGYAVIAVVRRVVERIPSVTYIEADLTDPATFAGEFPTVDCIIHLAGRAHILTDKVADPLAAFREVNRDATVRLATRALEAGVKRFVFVSSIGVNGNSTRQQAFNEDSPAGPHAPYAISKYEAEQELGTLLRGKGMELVVVRPPLIYANDAPGNFGRLLKLVASGLPLPLDGVRNARSLVSRRNIVGFLSLCAEHPDAAGELFLVADGEDVSIAQMIEALSRGMGRRPALFTFPAVLLKLVMCLLGKASMHEQLCGSLQVDASKARRLLGWVPVETIGAGLQAAGREYILRQRERRK
Atome Classification :
(20 SA)
----.........10........20--.------.-.--...----------------------..30..-----.---------.---------...-----.-----40..-----...-...50...--...--.--..60........70....-....80........90........100-------.---..-......110.-...------------..-.---120-------------......----.--.-------.130.---.......140.......150--.......160-----------------------.--.......170------------------..----------.----.----....180----..--.-.-.--.-.-.-190.-.....------..200.......210...-.---...220-----------.....-.--.-.230.......240.......-250......---..260----.--.---------.-------.--...270.......280.......290..-.....300.......310....------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
----MVTGAS
G
F
V
G
S
A
L
C
C
E
L
A
RT
G
--
Y
------
A
-
V
--
I
A
V
----------------------
V
R
R
V
V
E
-----R---------I---------P
S
V
-----
T
-----
Y
I
EA-----DLT-DPAT-FAG--EFP--
T
--
V
D
C
I
IHLAGR
A
H
I
L
T
D
KV-A
D
P
L
A
A
F
R
E
VNRD
A
T
V
R
L
A
T
R
A
L
E
A
---------
G
---
V
K
-
R
F
V
F
V
S
S
IGV-NGN------------
S
T
-
R
---
Q
---------------QAFNED----S--P-------AG-PH---APYA
I
S
K
Y
E
A
E
Q
E
L
G
T
L
L
RG--KG
M
E
L
V
V
VR------------------------P--
P
L
I
Y
ANDAP-------------------G
N
----------
F
----
G
----
R
L
L
K
L
V
-----AS--G-L-P--L-P-
L
-
D
-
G
V
-
R
N
A
R
S
------
L
V
S
R
R
N
I
V
G
F
L
S
L
C
AEHP-D---AAG
E
L
------------
F
L
V
AD-G--E-D
V
S
I
A
Q
M
I
E
A
L
S
RGMGRRP
A
L
-
F
T
-
F
P
A
V
L
L
---
K
L
V
M
C
----L--L---------G-------K--
A
S
M
H
E
Q
L
C
G
SLQV
D
A
S
K
A
R
R
L
LGWV
P
V
E
-
T
I
G
A
G
L
Q
AA
G
R
E
Y
I
L
R
Q
R
ERRK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
54
Fugue
87.42
26%
-91
- C1 -
4ID9
3
?
A:
[21-341]
--M
I
L
V
T
G
S
A
G
R
V
G
R
A
V
V
A
A
L
R
T
Q
G
--
R
------
T
-
V
--
R
G
F
----------------------
D
L
R
--
P
-----
S
---------
G
---------
T
G
G
-----
E
-----
E
V
V
G
-----
S
L
E
-
D
G
Q
A
-
L
S
D
--
A
I
M
--
G
--
V
S
A
V
L
H
L
G
A
----
F
M
S
W
A
-
P
A
D
R
D
R
M
F
A
V
N
V
E
G
T
R
R
L
L
D
A
A
S
A
A
---------
G
---
V
R
-
R
F
V
F
A
S
S
G
E
V
Y
P
E
N
------------
R
P
-
E
---
F
---------------
L
P
V
T
E
D
----
H
--
P
-------
L
C
-
P
N
---
S
P
Y
G
L
T
K
L
L
G
E
E
L
V
R
F
H
Q
R
S
--
G
A
M
E
T
V
I
L
R
FSHTQDATELLDEDSFF
S
G
P
R
F
F
L
R
--
P
R
I
H
Q
Q
Q
N
F
-------------------
G
N
----------
A
----
A
----
I
A
E
L
L
Q
-----
S
R
--
D
-
I
-
G
--
E
-
P
S
H
-
I
-
L
A
-
R
N
E
N
G
R
P
F
R
M
H
I
T
D
T
R
D
M
V
A
G
I
L
L
A
L
D
H
P
-
E
---
A
A
G
G
T
------------
F
N
L
G
A
-
D
--
E
-
P
A
D
F
A
A
L
L
P
K
I
A
A
L
T
G
L
P
I
V
T
-
V
D
-
F
P
-----------------------------
G
-------
D
--
G
V
-------
Y
Y
H
T
S
N
E
R
I
R
N
T
L
G
F
E
A
E
W
-
T
M
D
R
M
L
E
E
A
A
T
A
R
R
Q
R
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
HHSearch
85.50
25%
-103
- C1 -
1R6D
2
?
A:
[4-316]
----
L
V
T
G
G
A
G
F
I
G
S
H
F
V
R
Q
L
L
A
G
A
--
Y
PDVPAD
E
-
V
--
I
V
L
----------------------
D
S
L
T
Y
A
GNRAN
L
APVD-----
A
---------
D
P
R
-----
L
-----
R
F
V
H
-----
G
D
I
R
D
A
G
L
-
L
A
R
--
E
L
R
--
G
--
V
D
A
I
V
H
F
A
A
E
S
H
V
D
R
S
---
I
A
G
A
S
V
F
T
E
T
N
V
Q
G
T
Q
T
L
L
Q
C
A
V
D
A
---------
G
---
V
G
-
R
V
V
H
V
S
T
N
Q
V
-
Y
G
S
------------
I
D
-----
S
---------------
G
S
W
T
E
S
----
S
--
P
-------
L
E
-
P
N
---
S
P
Y
A
A
S
K
A
G
S
D
L
V
A
R
A
Y
H
R
T
--
Y
G
L
D
V
R
I
T
R
------------------------
C
--
C
N
N
Y
G
P
Y
Q
H
-------------------
P
E
K
L
--------
I
----
P
----
L
F
V
T
N
L
-----
L
D
--
G
-
G
-
T
--
L
-
P
-
L
-
Y
G
D
G
-
A
N
V
R
E
------
W
V
H
T
D
D
H
C
R
G
I
A
L
V
L
A
G
G
-----
R
A
G
E
I
------------
Y
H
I
G
G
-
G
--
L
-
E
L
T
N
R
E
L
T
G
I
L
L
D
S
L
G
A
D
W
S
S
-
V
R
-
K
V
A
---------
D
R
----
K
----------------------------
G
H
D
L
R
Y
S
L
D
G
G
K
I
E
R
E
L
G
Y
R
P
Q
V
-
S
F
A
D
G
L
A
R
T
V
R
W
Y
R
E
N
R
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
84.04
28%
-113
- C1 -
3WJ7
2
?
A:
[17-270]
----
L
V
T
G
A
T
G
F
V
G
S
A
V
A
R
V
L
E
E
R
G
--
H
------
R
-
L
--
R
L
L
----------------------
V
R
P
T
S
D
-----
R
-------------------
S
N
I
-----
A
-----
E
L
N
A
E
L
A
V
G
D
L
S
-
D
P
D
T
-
L
A
P
--
A
L
K
--
G
--
V
K
I
L
F
H
V
A
A
D
Y
R
L
W
---
V
-
P
D
P
E
T
M
M
K
-
A
N
V
E
G
T
R
N
L
M
L
A
A
L
E
A
---------
G
---
V
E
-
K
I
I
Y
C
S
S
V
A
A
-
L
G
L
------------
R
S
-
D
---
G
---------------
V
P
A
D
E
T
----
T
--
P
-------
V
S
-
E
S
QVI
G
I
Y
K
L
S
K
Y
R
A
E
Q
E
V
L
R
L
I
R
E
--
K
N
L
P
A
I
I
V
N
------------------------
P
S
T
P
V
G
P
R
D
I
K
P
-------------------
T
P
----------
T
----
G
----
Q
M
I
L
D
C
-----
A
S
--
G
N
M
-
P
--
A
-------
Y
V
-
E
T
G
L
N
------
I
V
H
V
D
D
V
A
E
G
H
A
L
A
L
E
R
--
G
---
K
I
G
E
K
------------
Y
I
L
G
--
G
--
E
-
N
I
M
L
G
D
L
F
R
M
V
S
Q
I
A
G
V
K
P
-------
P
A
V
K
L
---
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
HHSearch
82.57
18%
-104
- C1 -
2C5A
13
GME_ARATH
A:
[33-346]
----
S
I
T
G
A
G
G
F
I
A
S
H
I
A
R
R
L
K
H
E
G
--
H
------
Y
-
V
--
I
A
S
----------------------
D
W
K
K
N
E
-----
H
---------
M
TED------
M
F
C
-----
D
-----
E
F
H
L
-----
V
D
L
R
V
M
E
N
-
C
L
K
--
V
T
E
--
G
--
V
D
H
V
F
N
L
A
A
D
M
G
G
M
G
F
-
I
-
Q
S
N
H
S
V
I
M
Y
N
N
T
M
I
S
F
N
M
I
E
A
A
R
I
N
---------
G
---
I
K
-
R
F
F
Y
A
S
S
A
C
I
-
Y
P
E
------------
F
K
-
Q
---
L
ETTN-----------
V
S
L
K
E
S
----
D
AW
P
-------
A
E
-
P
Q
---
D
A
F
G
L
E
K
L
A
T
E
E
L
C
K
H
Y
N
K
D
--
F
G
I
E
C
R
I
G
R
------------------------
F
--
H
N
I
Y
G
P
F
G
T
-------------------
W
K
GGREK
A
----
P
----
A
----
A
F
C
R
K
A
-----
Q
T
--
S
T
D
-
R
--
F
-
E
-
M
-
W
G
D
G
-
L
Q
T
R
S
------
F
T
F
I
D
E
C
V
E
G
V
L
R
L
T
K
S
D
------
F
R
E
P
------------
V
N
I
G
S
-
D
--
E
-
M
V
S
M
N
E
M
A
E
M
V
L
S
F
E
E
K
K
L
P
I
-
H
H
-
I
P
G
P
E
G
-------------------------------------------
V
R
G
R
N
S
D
N
N
L
I
K
E
K
L
G
W
A
P
N
M
-
R
L
K
E
G
L
R
I
T
Y
F
W
I
K
E
Q
I
E
K
E
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
60
Fugue
82.16
24%
-87
- C1 -
1Z45
5
GAL10_YEAST
A:
[11-699]
S
K
I
V
L
V
T
G
G
A
G
Y
I
G
S
H
T
V
V
E
L
I
E
N
G
--
Y
------
D
-
C
--
V
V
A
D
NLSNS----------------
T
Y
D
S
V
A
-----
R
---------
L
---------
E
V
L
-----
T
K
H
H
I
P
F
Y
E
V
-----
D
L
C
-
D
R
K
G
-
L
E
K
--
V
F
K
E
Y
K
--
I
D
S
V
I
H
F
A
G
L
K
A
--
V
G
E
S
-
T
Q
I
P
L
R
Y
Y
H
N
N
I
L
G
T
V
V
L
L
E
L
M
Q
Q
Y
---------
N
---
V
S
-
K
F
V
F
S
S
S
A
T
V
-
Y
G
D
------------
A
T
-
R
FPN
M
---------------
I
P
I
P
E
E
----
C
--
P
-------
L
G
-
P
T
---
N
P
Y
G
H
T
K
Y
A
I
E
N
I
L
N
D
L
Y
N
S
D
K
K
S
W
K
F
A
I
L
R
Y
F
N
P
I
G
A
H----------------
P
--
S
G
L
I
G
E
D
P
L
-------------------
G
I
----------
P
----
N
----
N
L
L
P
Y
M
-----
A
Q
--
V
-
A
-
V
--
G
-
R
-
R
-
E
-
K
L
-
Y
I
F
R
D
------
G
T
P
I
R
D
Y
I
H
V
V
D
L
A
K
G
H
I
-
A
---
A
L
Q
Y
L
E
A
YNEN
E
G
L
C
R
E
W
N
L
G
S
-
G
--
K
-
G
S
T
V
F
E
V
Y
H
A
F
C
K
A
S
G
I
D
L
P
Y
-
V
L
----------------------------------------------------
N
L
T
A
K
P
D
R
A
K
R
E
L
K
W
Q
T
E
L
-
Q
V
E
D
S
C
K
D
L
W
K
W
T
T
E
N
P
F
G
Y
Q
L
RG
V
E
A
R
F
SAEDMRYDA
R
F
V
T
I
GAGTR
F
Q
A
T
F
A
NLGASIV
D
L
K
V
NGQSV
V
L
G
Y
EN
E
E
G
Y
L
NPDSAYIGATIGRYANRISKG
K
F
S
L
CN
K
D
Y
Q
L
TVNNGVNANHSSIGSFHR
K
R
F
L
G
P
I
I
Q
NPSKD
V
F
T
A
E
Y
M
L
I
D
N
EKDTEFP
G
D
L
L
V
T
I
Q
Y
T
V
N
VAQK
S
L
E
I
V
Y
K
G
K
L
TAGE
A
T
P
I
N
L
T
N
H
S
Y
F
N
LNKPYGDTIEG
T
E
I
M
V
RSK
K
S
V
D
V
D
KNMIPTG
N
I
V
D
R
EIATFNSTK
P
T
V
L
G
PKNP
Q
F
D
C
C
F
V
VDENAKPSQINTLNNELTLI
V
K
A
F
H
PDSN
I
T
L
E
V
L
S
TEP
T
Y
Q
F
Y
TGDFLSAGYEARQ
G
F
A
I
E
P
G
RYIDAINQENWKDCVTLKNG
E
T
Y
G
S
K
I
V
Y
R
F
S
33
HHSearch
80.47
19%
-101
- C1 -
2BLL
-
ARNA_ECOLI
A:
[319-654]
----
L
I
L
G
V
N
G
F
I
G
N
H
L
T
E
R
L
L
R
E
D
H-
Y
------
E
-
V
--
Y
G
L
----------------------
D
I
G
S
D
A
-----
I
SRFL-----
N
---------
H
P
H
-----
F
-----
H
F
V
E
-----
G
D
I
S
I
H
S
E
W
I
E
Y
--
H
V
K
--
K
--
C
D
V
V
L
P
L
V
A
I
A
T
P
I
E
Y
T
--
R
-
N
P
L
R
V
F
E
L
D
F
E
E
N
L
R
I
I
R
Y
C
V
K
Y
-------------
R
K
-
R
I
I
F
P
S
T
S
E
V
-
Y
G
M
------------
C
S
-----
D
---------------
K
Y
F
D
E
D
----
H
--
S
N
L
I
V
G
P
V
N
K
-
P
R
---
W
I
Y
S
V
S
K
Q
L
L
D
R
V
I
W
A
Y
G
E
K
--
E
G
L
Q
F
T
L
F
R
------------------------
P
--
F
N
W
M
G
P
R
L
D
-------------------
N
L
NAARIGSS
R
A
I
----
T
----
Q
L
I
L
N
L
-----
V
E
--
G
-
S
-
P
--
I
-
K
-
L
I
D
-
G
G
-
K
Q
K
R
C
------
F
T
D
I
R
D
G
I
E
A
L
Y
R
I
I
E
N
A
-
G
NR-
C
D
G
E
I
------------
I
N
I
G
N
-
P
--
E
N
E
A
S
I
E
E
L
G
E
M
L
L
A
S
F
E
K
H
P
L
R
-
H
H
-
F
P
P
F
A
G
---
F
R
V
V
------------------------------------
V
E
H
R
K
P
S
I
R
N
A
H
R
C
L
D
W
E
P
K
I
-
D
M
Q
E
T
I
D
E
T
L
D
F
F
L
R
T
V
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48
HHSearch
80.20
21%
-96
- C1 -
1KEW
5
RMLB_SALTY
A:
[4-340]
----
L
I
T
G
G
A
G
F
I
G
S
A
V
V
R
H
I
I
K
N
T
--
Q
------
D
T
V
--
V
N
I
----------------------
D
K
L
T
Y
A
-----
G
NLESLSDIS
E
---------
S
N
R
-----
Y
-----
N
F
E
H
-----
A
D
I
C
D
S
A
E
-
I
T
R
--
I
F
E
Q
Y
Q
--
P
D
A
V
M
H
L
A
A
E
S
H
V
D
R
S
I
---
T
G
P
A
A
F
I
E
T
N
I
V
G
T
Y
A
L
L
E
V
A
R
K
Y
W
S
A
LG
E
D
K
K
N
---
N
F
-
R
F
H
H
I
S
T
D
E
V
-
Y
G
D
------------
L
P
-
H
---
P
DEVENS
V
T
L
------
P
L
F
T
E
T
----
T
--
A
-------
Y
A
-
P
S
---
S
P
Y
S
A
S
K
A
S
S
D
H
L
V
R
A
W
R
R
T
--
Y
G
L
P
T
I
V
T
N
------------------------
C
--
S
N
N
Y
G
P
Y
H
F
-------------------
P
E
K
L
--------
I
----
P
----
L
V
I
L
N
A
-----
L
E
--
G
-
K
-
P
--
L
-
P
-
I
Y
G
-
K
G
-
D
Q
I
R
D
------
W
L
Y
V
E
D
H
A
R
A
L
H
M
V
V
T
E
G
-----
K
A
G
E
T
------------
Y
N
I
G
G
-
H
--
N
-
E
K
K
N
L
D
V
V
F
T
I
C
D
L
L
D
E
I
V
P
K
-
A
T
S
Y
R
E
Q
I
T
----
Y
----------
V
---------
A
-----------
D
R
-
P
G
H
D
R
R
Y
A
I
D
A
G
K
I
S
R
E
L
G
W
K
P
L
E
-
T
F
E
S
G
I
R
K
T
V
E
W
Y
L
A
N
T
Q
W
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
HHSearch
79.37
20%
-93
- C1 -
1OC2
4
?
A:
[8-328]
----
I
V
T
G
G
A
G
F
I
G
S
N
F
V
H
Y
V
Y
N
N
H
--
P
------
D
-
V
H
V
T
V
L
----------------------
D
K
L
T
Y
A
-----
G
NKANLEAI-
L
---------
G
D
R
-----
V
-----
E
L
V
V
-----
G
D
I
A
D
A
E
L
-
V
D
K
--
L
A
A
--
K
--
A
D
A
I
V
H
Y
A
A
E
S
H
N
D
N
S
---
L
N
D
P
S
P
F
I
H
T
N
F
I
G
T
Y
T
L
L
E
A
A
R
K
Y
---------
D
---
I
--
R
F
H
H
V
S
T
D
E
V
-
Y
G
D
------------
L
P
-
L
---
R
EDLPGHGEGPG----
E
K
F
T
A
E
----
T
--
N
-------
Y
N
-
P
S
---
S
P
Y
S
S
T
K
A
A
S
D
L
I
V
K
A
W
V
R
S
--
F
G
V
K
A
T
I
S
N
------------------------
C
--
S
N
N
Y
G
P
Y
Q
H
-------------------
I
E
KF--------
I
----
P
----
R
Q
I
T
N
I
-----
L
A
--
G
-
I
-
K
--
P
-
K
-
L
Y
G
-
E
G
-
K
N
V
R
D
------
W
I
H
T
N
D
H
S
T
G
V
W
A
I
L
T
K
G
-----
R
M
G
E
T
------------
Y
L
I
G
A
-
D
--
G
-
E
K
N
N
K
E
V
L
E
L
I
L
E
K
M
G
Q
P
K
D
A
-
Y
D
H
V
T
D
----------
R
----
A
------------
G
----------------
H
D
L
R
Y
A
I
D
A
S
K
L
R
D
E
L
G
W
T
P
Q
F
T
D
F
S
E
G
L
E
E
T
I
Q
W
Y
T
D
N
Q
D
W
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
HHSearch
79.15
17%
-88
- C1 -
1ORR
2
RFBE_SALTI
A:
[5-339]
----
L
I
T
G
G
C
G
F
L
G
S
N
L
A
S
F
A
L
S
Q
G
--
I
------
D
-
L
--
I
V
F
----------------------
D
N
L
S
R
K
-----
G
---------
A
T
D
N
L
H
W
L
S
S
L
G
N
-----
F
-----
E
F
V
H
-----
G
D
I
R
N
K
N
D
-
V
T
R
--
L
I
T
K
Y
M
--
P
D
S
C
F
H
L
A
G
Q
V
A
M
T
T
S
I
---
D
N
P
C
M
D
F
E
I
N
V
G
G
T
L
N
L
L
E
A
V
R
Q
Y
---------
N
S--
N
C
-
N
I
I
Y
S
S
T
N
K
V
-
Y
G
D
------------
L
E
-
Q
---
Y
K
Y
N
E
T
ETRYTCVDKP
N
G
Y
D
E
S
----
T
--
Q
-------
L
D
-
F
H
---
S
P
Y
G
C
S
K
G
A
A
D
Q
Y
M
L
D
Y
A
R
I
--
F
G
L
N
T
V
V
F
R
------------------------
H
--
S
S
M
Y
G
G
R
Q
F
-------------------
A
T
YDQG
W
-----
V
----
G
----
W
F
C
Q
K
A
V
E
I
--
K
N
GI
N
-
K
-
P
--
F
-
T
-
I
S
G
-
N
G
-
K
Q
V
R
D
------
V
L
H
A
E
D
M
I
S
L
Y
F
T
A
L
A
N
V
S
K
---
I
R
G
N
A
------------
F
N
I
G
G
-
T
IV
N
-
S
L
S
L
L
E
L
F
K
L
L
E
D
Y
C
N
I
D
M
R
F
-
T
N
-
L
P
V
R
E
------------------------------------------
S
D
Q
R
V
F
V
A
D
I
K
K
I
T
N
A
I
D
W
S
P
K
V
-
S
A
K
D
G
V
Q
K
M
Y
D
W
T
S
S
I
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
HHSearch
78.13
19%
-83
- C1 -
1T2A
3
GMDS_HUMAN
A:
[28-370]
----
L
I
T
G
I
T
G
Q
D
G
S
Y
L
A
E
F
L
L
E
K
G
--
Y
------
E
-
V
--
H
G
I
----------------------
V
R
R
S
S
S
-----
F
---------
N
TGRIEHLY---
N
-----
M
-----
K
L
H
Y
-----
G
D
L
T
D
S
T
C
-
L
V
K
--
I
I
N
E
V
K
--
P
T
E
I
Y
N
L
G
A
Q
S
H
V
K
I
S
---
F
D
L
A
E
Y
T
A
D
V
D
G
V
G
T
L
R
L
L
D
A
V
K
T
C
---------
G
LIN
S
V
-
K
F
Y
Q
A
S
T
S
E
L
-
Y
G
K
------------
V
Q
-----
E
---------------
I
P
Q
K
E
T
----
T
--
P
-------
F
Y
-
P
R
---
S
P
Y
G
A
A
K
L
Y
A
Y
W
I
V
V
N
F
R
E
A
--
Y
N
L
F
A
V
N
G
I
------------------------
L
--
F
N
H
E
S
P
R
R
G
-------------------
A
N
----------
F
V
---
T
R
K
I
S
R
S
V
A
K
I
-----
Y
L
--
G
-
Q
L
E
--
C
-
F
-
S
L
G
-
N
L
-
D
A
K
R
D
------
W
G
H
A
K
D
Y
V
E
A
M
W
L
M
L
Q
N
D
------
E
P
E
D
------------
F
V
I
A
T
-
G
--
E
-
V
H
S
V
R
E
F
V
E
K
S
F
L
H
I
G
K
T
I
V
W
-
E
G
-
K
N
E
N
E
V
---
G
R
C
K
E
TGKV
H
--
V
---------
T
-------
V
D
L
K
Y
Y
R
P
T
E
V
D
F
L
Q
G
D
C
T
K
A
K
Q
K
L
N
W
K
P
R
V
-
A
F
D
E
L
V
R
E
M
V
H
A
D
V
E
L
M
R
T
N
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
HHSearch
77.32
20%
-95
- C1 -
2HUN
1
?
A:
[7-317]
----
L
V
T
G
G
M
G
F
I
G
S
N
F
I
R
Y
I
L
E
K
H
P
D
W
------
E
-
V
--
I
N
I
----------------------
D
K
L
G
Y
G
SNPAN
L
KDLE-----
D
---------
D
P
R
-----
Y
-----
T
F
V
K
-----
G
D
V
A
D
Y
E
L
-
V
K
E
--
L
V
R
--
K
--
V
D
G
V
V
H
L
A
A
E
S
H
V
D
R
S
---
I
S
S
P
E
I
F
L
H
S
N
V
I
G
T
Y
T
L
L
E
S
I
R
R
E
N--------
P
---
E
V
-
R
F
V
H
V
S
T
D
E
V
-
Y
G
D
------------
I
L
-----
K
---------------
G
S
F
T
E
N
----
D
--
R
-------
L
M
-
P
S
---
S
P
Y
S
A
T
K
A
A
S
D
M
L
V
L
G
W
T
R
T
--
Y
N
L
N
A
S
I
T
R
------------------------
C
--
T
N
N
Y
G
P
Y
Q
F
-------------------
P
E
K
L
--------
I
----
P
----
K
T
I
I
R
A
-----
S
L
--
G
-
L
-
K
--
I
-
P
-
I
Y
G
-
T
----
V
R
D
------
W
L
Y
V
E
D
H
V
R
A
I
E
L
V
L
L
K
G
-----
E
S
R
E
I
------------
Y
N
I
S
A
-
G
--
E
-
E
K
T
N
L
E
V
V
K
I
I
L
R
L
M
G
K
G
E
E
L
-
I
E
-
L
V
E
D
---------
R
----
P
----------------------------
G
H
D
L
R
Y
S
L
D
S
W
K
I
T
R
D
L
K
W
R
P
K
Y
-
T
F
D
E
G
I
K
K
T
I
D
W
Y
L
K
N
E
W
W
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
HHSearch
77.08
20%
-82
- C1 -
1DB3
-
GM4D_ECOLI
A:
[5-357]
----
L
I
T
G
V
T
G
Q
D
G
S
Y
L
A
E
F
L
L
E
K
G
--
Y
------
E
-
V
--
H
G
I
----------------------
K
R
------------------------------
P
K
-----
F
-----
H
L
H
Y
-----
G
D
L
S
D
T
S
N
-
L
T
R
--
I
L
R
E
V
Q
--
P
D
E
V
Y
N
L
G
A
M
S
H
V
A
V
S
F
---
E
S
P
E
Y
T
A
D
V
D
A
M
G
T
L
R
L
L
E
A
I
R
F
L
---------
G
LEK
K
T
-
R
F
Y
Q
A
S
T
S
E
L
-
Y
G
L
------------
V
Q
-----
E
---------------
I
P
Q
K
E
T
----
T
--
P
-------
F
Y
-
P
R
---
S
P
Y
A
V
A
K
L
Y
A
Y
W
I
T
V
N
Y
R
E
S
--
Y
G
M
Y
A
C
N
G
I
------------------------
L
--
F
N
H
E
S
P
R
R
G
-------------------
E
T
F
V
T
R
K
-----
I
----
T
----
R
A
I
A
N
I
-----
A
Q
--
G
-
L
E
S
--
C
-
L
Y
L
-
G
-
N
M
-
D
S
L
R
D
------
W
G
H
A
K
D
Y
V
K
M
Q
W
M
M
L
Q
Q
E
------
Q
P
E
D
------------
F
V
I
A
T
-
G
--
V
-
Q
Y
S
V
R
Q
F
V
E
M
A
A
A
Q
L
G
I
K
L
R
F
-
E
G
-
T
G
V
E
E
K
---
G
I
V
V
S
----
V
--
T
GHDAPGVKP
G
DVI
I
A
V
D
P
--
R
Y
F
R
P
A
E
-
E
T
L
L
G
D
P
T
K
A
H
E
K
L
G
W
K
P
E
I
-
T
L
R
E
M
V
S
E
M
V
A
N
D
L
E
A
A
K
K
H
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
HHSearch
76.91
17%
-96
* C1 *
2PK3
2
RMD_ANETH
A:
[16-320]
----
L
I
T
G
V
A
G
F
V
G
K
Y
L
A
N
H
L
T
E
Q
N
--
V
------
E
-
V
--
F
G
T
----------------------
S
R
N
N
E
A
-----
K
-------------------
L
P
N
-----
V
-----
E
M
I
S
-----
L
D
I
M
D
S
Q
R
-
V
K
K
--
V
I
S
D
I
K
--
P
D
Y
I
F
H
L
A
A
K
S
S
V
K
D
S
W
---
L
N
K
K
G
T
F
S
T
N
V
F
G
T
L
H
V
L
D
A
V
R
D
S
---------
N
L--
D
C
-
R
I
L
T
I
G
S
S
E
E
-
Y
G
M
------------
I
L
P
E
---
E
---------------
S
P
V
S
E
E
----
N
--
Q
-------
L
R
-
P
M
---
S
P
Y
G
V
S
K
A
S
V
G
M
L
A
R
Q
Y
V
K
A
--
Y
G
M
D
I
I
H
T
R
------------------------
T
--
F
N
H
I
G
P
G
Q
S
-------------------
L
G
F
V
--------
T
----
Q
----
D
F
A
K
Q
I
V
D
I
E
M
E
K
--
Q
-
E
-
P
--
I
-
I
K
V
-
G
-
N
L
-
E
A
V
R
D
------
F
T
D
V
R
D
I
V
Q
A
Y
W
L
L
S
Q
Y
G
-----
K
T
G
D
V
------------
Y
N
V
C
S
-
G
--
I
-
G
T
R
I
Q
D
V
L
D
L
L
L
A
M
A
N
V
K
I
D
T
-
E
L
-
N
P
L
Q
L
--------
R
----
P
----------------------------
S
E
V
P
T
L
I
G
S
N
K
R
L
K
D
S
T
G
W
K
P
R
I
-
P
L
E
K
S
L
F
E
I
L
Q
S
Y
R
Q
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
HHSearch
76.52
20%
-94
- C1 -
3KO8
2
?
A:
[4-310]
----
V
V
T
G
G
A
G
F
I
G
S
H
L
V
D
K
L
V
E
L
G
--
Y
------
E
-
V
--
V
V
V
----------------------
D
N
L
S
S
G
-----
R
REF------
V
---------
N
P
S
-----
A
-----
E
L
H
V
-----
R
D
L
K
D
Y
S
W
-
G
-
A
---
G
I
--
K
--
G
D
V
V
F
H
F
A
A
N
P
E
V
R
L
S
---
T
T
E
P
I
V
H
F
N
E
N
V
V
A
T
F
N
V
L
E
W
A
R
Q
T
---------
G
---
V
R
-
T
V
V
F
A
S
S
S
T
V
-
Y
G
D
------------
A
D
-----
V
---------------
I
P
T
P
E
E
----
E
--
P
-------
Y
K
-
P
I
---
S
V
Y
G
A
A
K
A
A
G
E
V
M
C
A
T
Y
A
R
L
--
F
G
V
R
C
L
A
V
R
------------------------
Y
--
A
N
V
V
G
P
R
L
R
-------------------
H
G
V
---------
I
----
Y
----
D
F
I
M
K
L
-----
R
R
N-
P
-
N
-
V
--
L
-
E
-
V
L------
Q
R
K
S
------
Y
L
Y
V
R
D
A
V
E
A
T
L
A
A
W
K
K
F
-
E
E
M
D
A
P
F
L
A
------------
L
N
V
G
N
-
V
--
D
-
A
V
R
V
L
D
I
A
Q
I
V
A
E
V
L
G
L
R
P
E
I
-
R
L
-
V
----------------------------------------------
G
D
V
K
Y
M
T
L
A
V
T
K
L
M
K
L
T
G
W
R
P
T
M
-
T
S
A
E
A
V
K
K
T
A
E
D
L
A
K
E
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
58
Fugue
76.50
17%
-93
- C1 -
1QRR
4
SQD1_ARATH
A:
[2-391]
-K
R
V
M
V
I
G
G
D
G
Y
C
G
W
A
T
A
L
H
L
S
K
K
N
--
Y
------
E
-
V
--
C
I
V
D
NL
V
R
R
L
F
D
H
Q
L
GLESL
T
P
I
A
S
I
H
D
R
I
S
-----
R
---------
W
---------
K
A
L
TG
K
S
I
E
-----
L
Y
V
G
-----
D
I
C
-
D
F
E
F
-
L
A
E
--
S
F
K
--
S
F
E
P
D
S
V
V
H
F
G
E
Q
R
S
A
P
Y
S
M
I
D
R
S
R
A
V
Y
T
Q
H
N
N
V
I
G
T
L
N
V
L
F
A
I
K
E
F
---------
G
---
E
E
C
H
L
V
K
L
G
T
M
G
E
-
Y
G
T
PNIDIEEG
Y
I
T
I
T
H
-
N
---
G
---------------
R
T
D
T
L
P
----
Y
--
P
-------
K
Q
-
A
S
---
S
F
Y
H
L
S
K
V
H
D
S
H
N
I
A
F
T
C
K
A
--
W
G
I
R
A
T
D
L
N
------------------------
Q
--
G
V
V
Y
G
V
K
T
D
ETEMHEEL
R
N
R
L
D
YDAVFG
T
A
----------
L
----
N
----
R
F
C
V
Q
A
-----
A
V
--
G
-
H
-
P
--
L
-
T
-
V
-
Y
-
G
K
G
G
Q
T
R
G
------
Y
L
D
I
R
D
T
V
Q
C
V
E
I
A
I
A
N
P
-
A
---
K
A
G
E
F
------------
R
V
F
N
Q
F
T
--
E
-
Q
F
S
V
N
E
L
A
S
L
V
T
K
A
G
S
K
L
G
L
D
-
V
K
-
K
M
T
V
-----------------------------------
P
--
N
P
R
V
E
A
E
E
H
Y
Y
N
A
K
H
T
K
L
M
E
L
-
G
L
E
P
H
Y
-
L
S
D
S
L
L
D
S
L
L
N
F
A
V
Q
F
K
D
R
V
D
T
KQIMPSVSWKKIGVKTKS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
HHSearch
73.91
17%
-86
- C1 -
1RPN
3
GM4D_PSEAE
A:
[18-334]
----
L
V
T
G
I
T
G
Q
D
G
A
Y
L
A
K
L
L
L
E
K
G
--
Y
------
R
-
V
--
H
G
L
----------------------
V
A
R
R
S
S
-----
D
---------
T
R
W
R
L
R
E
L
GI
E
G
D
-----
I
-----
Q
Y
E
D
-----
G
D
M
A
D
A
C
S
-
V
Q
R
--
A
V
I
K
A
Q
--
P
Q
E
V
Y
N
L
A
A
Q
S
F
V
G
A
S
---
W
N
Q
P
V
T
T
G
V
V
D
G
L
G
V
T
H
L
L
E
A
I
R
Q
F
S--------
P
---
E
T
-
R
F
Y
Q
A
S
T
S
E
M
-
F
G
L
------------
I
Q
-----
A
---------------
E
R
Q
D
E
N
----
T
--
P
-------
F
Y
-
P
R
---
S
P
Y
G
V
A
K
L
Y
G
H
W
I
T
V
N
Y
R
E
S
--
F
G
L
H
A
S
S
G
I
------------------------
L
--
F
N
H
E
S
P
L
R
G
-------------------
I
E
F
V
T
R
K
-----
V
----
T
----
D
A
V
A
R
I
-----
K
L
--
G
-
K
-
Q
Q
E
L
-
R
-
L
-
G
-
N
V
-
D
A
K
R
D
------
W
G
F
A
G
D
Y
V
E
A
M
W
L
M
L
Q
Q
D
------
K
A
D
D
------------
Y
V
V
A
T
-
G
--
V
-
T
T
T
V
R
D
M
C
Q
I
A
F
E
H
V
G
L
D
Y
R
D
F
L
K
-
I
D
P
A
F
F
-------
R
--------------------------------
P
A
E
V
D
V
L
L
G
N
P
A
K
A
Q
R
V
L
G
W
K
P
R
T
-
S
L
D
E
L
I
R
M
M
V
E
A
D
L
R
R
V
S
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
HHSearch
73.58
17%
-89
- C1 -
2Z1M
2
?
A:
[7-340]
----
L
I
T
G
I
R
G
Q
D
G
A
Y
L
A
K
L
L
L
E
K
G
--
Y
------
E
-
V
--
Y
G
A
----------------------
D
R
R
S
G
E
-----
F
---------
A
S
W
R
L
K
E
L
GI
E
N
D
-----
V
-----
K
I
I
H
-----
M
D
L
L
E
F
S
N
-
I
I
R
--
T
I
E
K
V
Q
--
P
D
E
V
Y
N
L
A
A
Q
S
F
V
G
V
S
F
---
E
Q
P
I
L
T
A
E
V
D
A
I
G
V
L
R
I
L
E
A
L
R
T
V
K--------
P
---
D
T
-
K
F
Y
Q
A
S
T
S
E
M
-
F
G
K
------------
V
Q
-----
E
---------------
I
P
Q
T
E
K
----
T
--
P
-------
F
Y
-
P
R
---
S
P
Y
A
V
A
K
L
F
G
H
W
I
T
V
N
Y
R
E
A
--
Y
N
M
F
A
C
S
G
I
------------------------
L
--
F
N
H
E
S
P
L
R
G
-------------------
I
E
F---------
V
T
R
K
I
T
----
Y
S
L
A
R
I
-----
K
Y
--
G
-
L
Q
D
--
K
L
V
-
L
-
G
-
N
L
-
N
A
K
R
D
------
W
G
Y
A
P
E
Y
V
E
A
M
W
L
M
M
Q
Q
P
------
E
P
D
D
------------
Y
V
I
A
T
-
G
--
E
-
T
H
T
V
R
E
F
V
E
K
A
A
K
I
A
G
F
D
I
E
W
-
V
G
-
E
G
I
N
E
K
G
I
D
R
N
T
G
K
V---
I
V
E
V
---------
S
-------
E
--
E
F
F
R
P
A
E
V
D
I
L
V
G
N
P
E
K
A
M
K
K
L
G
W
K
P
R
T
-
T
F
D
E
L
V
E
I
M
M
E
A
D
L
K
R
V
R
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
71.70
31%
-100
- C1 -
1UDC
6
GALE_ECOLI
A:
[4-167]
----
L
V
T
G
G
S
G
Y
I
G
S
H
T
C
V
Q
L
L
Q
N
G
--
H
------
D
-
V
--
I
I
L
D
NLCNSKRS-------------
V
L
P
V
I
E
-----
R
---------
L
G
G-------
K
H
P
-----
T
-----
F
V
E
G
-----
D
I
R
-
N
E
A
L
-
M
T
E
I
L
H
D
H
--
A
--
I
D
T
V
I
H
F
A
G
L
K
A
V
-
G
E
S
V
-
Q
K
P
L
E
-
Y
Y
D
N
N
V
N
G
T
L
R
L
I
S
A
M
R
A
A
---------
N
---
V
K
-
N
F
I
F
S
S
S
A
T
V
-
Y
G
D
------------
Q
P
-
K
-------------------
I
P
Y
V
E
S
----
F
--
P
-------
T
G
T
P
Q
---
S
P
Y
G
K
S
K
L
M
V
E
Q
I
L
T
D
L
Q
K
A
--
Q
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
HHSearch
71.49
18%
-107
- C1 -
2X4G
-
?
A:
[16-337]
----
A
V
L
G
A
T
G
L
L
G
H
H
A
A
R
A
I
R
A
A
G
--
H
------
D
-
L
--
V
L
I
----------------------
H
R
P
S
S
Q
-----
I
---------
Q
RLA------
Y
L
E
-----
P
-----
E
C
R
V
-----
A
E
M
L
D
H
A
G
-
L
E
R
--
A
L
R
--
G
--
L
D
G
V
I
F
S
-----------------
E
E
V
A
S
A
L
G
Q
T
N
P
F
Y
A
A
C
L
Q
A
---------
R
---
V
P
-
R
I
L
Y
V
G
S
A
Y
A
-
M
P
R
------------
H
P
-
Q
---
G
---------------
L
P
G
H
E
G
LFYD
S
--
L
-------
P
S
-
G
K
---
S
S
Y
V
L
C
K
W
A
L
D
E
Q
A
R
E
Q
A
R
---
N
G
L
P
V
V
I
G
I
------------------------
P
--
G
M
V
L
G
E
L
D
I
-------------------
G
P
T---------
T
----
G
----
R
V
I
T
A
I
-----
G
N
--
G
-
E
-
M
--
T
-
H
-
Y
----
V
-
A
G
Q
R
N
------
V
I
D
A
A
E
A
G
R
G
L
L
M
A
L
E
R
G
-----
R
I
G
E
R
------------
Y
L
L
T
G
----
H
-
N
L
E
M
A
D
L
T
R
R
I
A
E
L
L
G
Q
P
A
P
Q
--
P
-
M
S
M
A
M
A
---
R
A
L
A
T
----
L
--
G
R
L----------------------
E
V
M
A
G
G
Q
F
L
D
G
R
K
A
R
E
E
L
G
F
F
S
T
T
-
A
L
D
D
T
L
L
R
A
I
D
W
F
R
D
N
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
70.56
31%
-101
- C1 -
1UDB
4
GALE_ECOLI
A:
[4-167]
----
L
V
T
G
G
S
G
Y
I
G
S
H
T
C
V
Q
L
L
Q
N
G
--
H
------
D
-
V
--
I
I
L
D
NLCNSKRS-------------
V
L
P
V
I
E
-----
R
---------
L
G
G-------
K
H
P
-----
T
-----
F
V
E
G
-----
D
I
R
-
N
E
A
L
-
M
T
E
I
L
H
D
H
--
A
--
I
D
T
V
I
H
F
A
G
L
K
A
V
-
G
E
S
V
-
Q
K
P
L
E
-
Y
Y
D
N
N
V
N
G
T
L
R
L
I
S
A
M
R
A
A
---------
N
---
V
K
-
N
F
I
F
S
S
S
A
T
V
-
Y
G
D
------------
N
P
-
K
-------------------
I
P
Y
V
E
S
----
F
--
P
-------
T
G
T
P
Q
---
S
P
Y
G
K
S
K
L
M
V
E
Q
I
L
T
D
L
Q
K
A
--
Q
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------