@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA3227: (2016-02-15 )
MLKRLLIAACTLLFAGSLLAATPAAKPHVLIATSLGEIEVELDPAKAPISVKNFLEYVDSGYYDGTLFHRVIPGFMVQTGGFSAGMQEKKTRAPIKNEADNGLLNERGTLAMARTGVVDSATSQFFINLTDNDFLNHGARDFGYAVFGKVVRGMGVVDQIAKVPTTRRNGFADVPSDDVVILSAKRL

Atome Classification :

(23 SA) .........10........20...---.....30.-----.......40........50.......-----------.60........70.......------.80--.......--.-.--90-........100.-...-..-.110....--...120.......130.....---.---.---140--........150-.......160.......--170.......180.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MLKRLLIAACTLLFAGSLLAATPA---AKPHVLIA-----TSLGEIEVELDPAKAPISVKNFLEYV-----------DSGYYDGTLFHRVIPGFMVQ------TG---GFSAGMQ--E-K--KT-RAPIKNEADNGL-LNE-RG-TLAMARTG--VVDSATSQFFINLTDNDFLNH---G---A---RD---FGYAVFGKVVR-GMGVVDQIAKVPTTRRN--GFADVPSDDVVILSAKRL
22 PsiBlast_CBE 94.9766% -95 - C8 -1V9T PPIA_ECOLI B:[5-165] -----------------------------PHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV-----------NSGFYNNTTFHRVIPGFMIQ------GG---GFTEQMQ--Q-K--KP-NPPIKNEADNGL-RNT-RG-TIAMARTA--DKDSATSQFFINVADNAFLDH---G---Q---RD---FGYAVFGKVVK-GMDVADKISQVPTHDVG--PYQNVPSKPVVILSATVL
122 HHSearch 94.2765% -89 - C8 -1V9T - PPIA_ECOLI A:[2-165] -----------------------K---GDPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV-----------NSGFYNNTTFHRVIPGFMIQ------GG---GFTEQMQ--Q-K--KP-NPPIKNEADNGL-RNT-RG-TIAMARTA--DKDSATSQFFINVADNAFLDH---G---Q---RD---FGYAVFGKVVK-GMDVADKISQVPTHDVG--PYQNVPSKPVVILSATVL
3 PsiBlast_PDB 94.0966% -92 - C8 -1V9T - PPIA_ECOLI A:[5-165] -----------------------------PHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV-----------NSGFYNNTTFHRVIPGFMIQ------GG---GFTEQMQ--Q-K--KP-NPPIKNEADNGL-RNT-RG-TIAMARTA--DKDSATSQFFINVADNAFLDH---G---Q---RD---FGYAVFGKVVK-GMDVADKISQVPTHDVG--PYQNVPSKPVVILSATVL
21 PsiBlast_CBE 94.0166% -95 - C8 -1VAI PPIA_ECOLI B:[5-165] -----------------------------PHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV-----------NSGFYNNTTFHRVIPGFMIQ------GG---GFTEQMQ--Q-K--KP-NPPIKNEADNGL-RNT-RG-TIAMARTA--DKDSATSQFFINVADNAFLDH---G---Q---RD---FGYAVFGKVVK-GMDVADKISQVPTHDVG--PYQNVPSKPVVILSATVL
2 PsiBlast_PDB 93.7866% -93 - C8 -1J2A - PPIA_ECOLI A:[5-165] -----------------------------PHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV-----------NSGFYNNTTFHRVIPGFMIQ------GG---GFTEQMQ--Q-K--KP-NPPIKNEADNGL-RNT-RG-TIAMARTA--DKDSATSQFFINVADNAFLDH---G---Q---RD---FGYAVFGKVVK-GMDVADKISQVPTHDVG--PYQNVPSKPVVILSATVL
4 PsiBlast_PDB 92.7566% -89 - C8 -1VAI - PPIA_ECOLI A:[5-165] -----------------------------PHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV-----------NSGFYNNTTFHRVIPGFMIQ------GG---GFTEQMQ--Q-K--KP-NPPIKNEADNGL-RNT-RG-TIAMARTA--DKDSATSQFFINVADNAFLDH---G---Q---RD---FGYAVFGKVVK-GMDVADKISQVPTHDVG--PYQNVPSKPVVILSATVL
117 HHSearch 89.6156% -89 - C8 -3S6M ? A:[3-167] ----------------------------GSMVELH-----TNHGVIKLELDEAKAPKTVENFLNYV-----------KKGHYDGTIFHRVINGFMIQ------GG---GFEPGLK--Q-K--PT-DAPIANEANNGL-KND-TY-TIAMARTN--DPHSATAQFFINVNDNEFLNH---SSPTP---QG---WGYAVFGKVVE-GQDIVDKIKAVKTGS-----HQDVPNDDVVIEKAVVV
5 PsiBlast_PDB 88.9257% -96 - C8 -3S6M ? A:[6-164] -------------------------------VELH-----TNHGVIKLELDEAKAPKTVENFLNYV-----------KKGHYDGTIFHRVINGFMIQ------GG---GFEPGLK--Q-K--PT-DAPIANEANNGL-KND-TY-TIAMARTN--DPHSATAQFFINVNDNEFLNH---S---SPTPQG---WGYAVFGKVVE-GQDIVDKIKAVKTGS-----HQDVPNDDVVIEKA---
6 PsiBlast_PDB 88.7455% -88 - C8 -3T1U ? A:[2-161] -------------------------------IKLQ-----TNHGTITLKLFADKAPETAANFEQYV-----------KDGHYDGTIFHRVIDGFMIQ------GG---GFEPGMK--Q-K--ST-RAPIKNEANNGL-SNK-KY-TIAMARTP--DPHSASAQFFINVKDNAFLDHTAPT---A---HG---WGYAVFGEVVE-GTDVVDRIKSVATGSRA--GHGDVPVDDVIIEKAE--
8 PsiBlast_PDB 88.0055%-100 - C8 -2RS4 - PPIB_ECOLI A:[2-159] -------------------------------VTFH-----TNHGDIVIKTFDDKAPETVKNFLDYC-----------REGFYNNTIFHRVINGFMIQ------GG---GFEPGMK--Q-K--AT-KEPIKNEANNGL-KNT-RG-TLAMARTQ--APHSATAQFFINVVDNDFLNF---S---G---ESLQGWGYCVFAEVVD-GMDVVDKIKGVATGRSG--MHQDVPKEDVIIES----
1 PsiBlast_PDB 87.4767% -86 - C8 -1CLH - PPIA_ECOLI A:[5-165] -----------------------------PHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV-----------NSGFYNNTTFHRVIPGFMIQ------GG---GFTEQMQ--Q-K--KP-NPPIKNEADNGL-RNT-RG-TIAMARTA--DKDSATSQFFINVADNAFLDH---G---Q---RD---FGYAVFGKVVK-GMDVADKISQVPTHDVG--PYQNVPSKPVVILSAKVL
7 PsiBlast_PDB 86.5155% -93 - C8 -2NUL - PPIB_ECOLI A:[2-159] -------------------------------VTFH-----TNHGDIVIKTFDDKAPETVKNFLDYC-----------REGFYNNTIFHRVINGFMIQ------GG---GFEPGMK--Q-K--AT-KEPIKNEANNGL-KNT-RG-TLAMARTQ--APHSATAQFFINVVDNDFLNF---S---G---ESLQGWGYCVFAEVVD-GMDVVDKIKGVATGRSG--MHQDVPKEDVIIES----
11 PsiBlast_PDB 74.6035%-107 - C8 -1XWN - PPIL1_HUMAN A:[1-162] ------------------MAAIPPDSWQPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELA-----------RRGYYNGTKFHRIIKDFMIQGGDPTGTG---RGGASIY--G-K--QF-EDELHPDLK----FTG-AG-ILAMANAG---PDTNGSQFFVTLAPTQWL--------------D---GKHTIFGRVCQ-GIGMVNRVGMVETNSQ------DRPVDDVKIIKA---
10 PsiBlast_PDB 74.0536%-100 - C8 -2K7N - PPIL1_HUMAN A:[1-162] ------------------MAAIPPDSWQPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELA-----------RRGYYNGTKFHRIIKDFMIQGGDPTGTG---RGGASIY--G-K--Q-----FEDELHPDLKFTG-AG-ILAMANAG---PDTNGSQFFVTLAPTQWL--------------D---GKHTIFGRVCQ-GIGMVNRVGMVETNSQ------DRPVDDVKIIKA---
128 HHSearch 73.1734% -78 - C8 -1A58 - CYP1_BRUMA A:[3-176] ----------------------KK---DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQ------GG---DFTKGDGTGG-E--SIYGGMFDDEEF-VM-KHDEPF-VVSMANK---GPNTNGSQFFITTTPAPHLN-----------------NIHVVFGKVVS-GQEVVTKIEYLKTNS------KNRPLADVVILNCGEL
24 PsiBlast_CBE 73.1433% -88 - C8 -2OJU PPIL3_HUMAN B:[9-160] -------------------------------VTLH-----TDVGDIKIEVFCERTPKTCENFLALC-----------ASNYYNGCIFHRNIKGFMVQ------TGDPTGTGRGGN--S-I--WG-KKFEDEYSEYLK-HNV-RG-VVSMANNG---PNTNGSQFFITYGKQPHL--------------D---MKYTVFGKVID-GLETLDELEKLPVNEKTYRPLNDVHIKDITI------
15 PsiBlast_PDB 72.8733% -87 - C8 -2OK3 PPIL3_HUMAN A:[3-154] -------------------------------VTLH-----TDVGDIKIEVFCERTPKTCENFLALC-----------ASNYYNGCIFHRNIKGFMVQ------TGDPTGTGRGGN--S-I--WG-KKFEDEYSEYLK-HNV-RG-VVSMANNG---PNTNGSQFFITYGKQPHL--------------D---MKYTVFGKVID-GLETLDELEKLPVNEKTYRPLNDVHIKDITI------
125 HHSearch 72.8131% -80 - C8 -3BKP ? A:[14-192] ------------------LYFQGS---TRGKVVLH-----TSLGDLDVELWARECPLACRNFVQLC-----------LEGYYVNTIFHRVVKDFIVQ------GG---DPTGTGR--GGADTTFDGKPFDVETHPRL-KFRYRG-LVGVANLG-----TNGNQFFITLARADVLN-----------------NAYTLFGKVTGHTLYNLMKFNDLEVGK------EDRPMTPPFIKSVDVL
17 PsiBlast_PDB 72.2034% -79 - C8 -2FU0 - ? A:[9-157] --------------------------------IIY-----TTMGDIHISLFYKECKKTVQNFSVHS-----------INGYYNNCIFHRVIKHFMVQ------TG---DPSGDGTGGE-S--IW-GNEFEDEFFDHL-NHS-KPFMVSMANCG---PNTNGSQFFITTVPCPWL--------------D---FKHTVFGKVTQ-GSKIVLDIEKVRTDKR------DKPLEDIKILNIK--
16 PsiBlast_PDB 72.0133% -83 - C8 -2OJU PPIL3_HUMAN A:[9-160] -------------------------------VTLH-----TDVGDIKIEVFCERTPKTCENFLALC-----------ASNYYNGCIFHRNIKGFMVQ------TGDPTGTGRGGN--S-I--WG-KKFEDEYSEYLK-HNV-RG-VVSMANNG---PNTNGSQFFITYGKQPHL--------------D---MKYTVFGKVID-GLETLDELEKLPVNEKTYRPLNDVHIKDITI------
116 HHSearch 69.0630% -76 - C8 -2POE ? A:[15-174] ---------------------------YFQGVRII-----TNYGDLKFELFCSQCPKACKNFLALS-----------ASGYYKNTIFHKNIKGFIIQ------GG---DPTGTGK--GGE--SIYGRYFDDEIYPEL-KYDRRG-ILSMASKGAKKPNTNGSQFFITYSSLPQLN-----------------GEYVIFGKLID-GFETLNTLENCPSDK------SHKPIDEIIIKDIVIH
13 PsiBlast_PDB 59.9239% -59 - C8 -4R3E CWC27_HUMAN A:[8-136] -------------------IQEPP---TNGKVLLK-----TTAGDIDIELWSKEAPKACRNFIQLC-----------LEAYYDNTIFHRVVPGFIVQGGDP--TG---TGSGG----E-S--IY-GAPFKDEFHSRLRFNR-RG-LVAMANAG--SHDNG-SQFFFTLGRADELNN-----------------KHTIFGKVT---------------------------------------
12 PsiBlast_PDB 59.8140% -58 - C8 -2HQ6 CWC27_HUMAN A:[18-146] -------------------GSEPP---TNGKVLLK-----TTAGDIDIELWSKEAPKACRNFIQLC-----------LEAYYDNTIFHRVVPGFIVQGGDP--TG---TGSGG----E-S--IY-GAPFKDEFHSRLRFNR-RG-LVAMANAG--SHDNG-SQFFFTLGRADELNN-----------------KHTIFGKVT---------------------------------------