@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA3279: (2016-02-15 )
MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAYRDWKYQINYDLSRNVGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEKATSSKWVTALERNLTYDIADWVNDNVGTGIQASSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLRRTVKAERDREDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF

Atome Classification :

(20 SA) ----.........10........20........30........40.......-----.50........60........70......-------..80........90......--.--.100.......110.-----------.--.....120.......130-------........---140.....-----..-150-......--..160..--.-.-.--.----..---170.-..---.....180-..-.-.-----...190.......200.-.---------------.------.....210.......220...-....230---....---....240......--------.250.------......260.......---------270......------.280......--.290.-----......----300..--....-..310....-----------------.------------------.-------------.--------------320-------.........330..------.....340....---...350......--.-360.......370.......380..-.....-390.......400.----...-...410.......420.------------......430.......440
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLE-----VATTDKEFSFKLGGRLQADYGRFDGYYTN-------NGNTADAAYFRRAYLEFGGT--A--YRDWKYQINYDLSRN-----------V--GNDSAGYFDEASVTYTG--------FNPVNLKF---GRFYTDFG-----LE-K-A-TSSKWV--TAL-ERN--L-T-Y--D----IA---D-WV-ND---NVGTGIQA-SS-V-V-----GGMAFLSGSVFSEN-NN-D---------------T------DGDSVKRYNLRGVFAPLHEPG-NVVHLG----LQYA---YRDLEDSAVDTRI--------RPRMG------MRGVSTNGGNDAGSNG---------NRGLFGGSS------AVEGLWKDDS--VWGLE-----GAWALG----A-FSA--QAEY-LRRTVKAER-----------------D------------------R-------------E--------------D---------LKASGYYAQLAYTL------TGEPRLYKLDGA---KFDTIKPENKEI--G-AWELFYRYDSIKVEDDNIVVDSATR-EVGDA-KGKTHTLGVNWYAN----EAV-KVSANYVKAKTDKISNA------------NGDDSGDGLVMRLQYVF
3 PsiBlast_CBE 95.64100% -15 - C3 -2O4V PORP_PSEAE C:[1-411] ---------------------------------GTVTTDGADIVIKTKGGLE-----VATTDKEFSFKLGGRLQADYGRFDGYYTN-------NGNTADAAYFRRAYLEFGGT--A--YRDWKYQINYDLSRN-----------V--GNDSAGYFDEASVTYTG--------FNPVNLKF---GRFYTDFG-----LE-K-A-TSSKWV--TAL-ERN--L-T-Y--D----IA---D-WV-ND---NVGTGIQA-SS-V-V-----GGMAFLSGSVFSEN-NN-D---------------T------DGDSVKRYNLRGVFAPLHEPG-NVVHLG----LQYA---YRDLEDSAVDTRI--------RPRMG------MRGVSTNGGNDAGSNG---------NRGLFGGSS------AVEGLWKDDS--VWGLE-----GAWALG----A-FSA--QAEY-LRRTVKAER-----------------D------------------R-------------E--------------D---------LKASGYYAQLAYTL------TGEPRLYKLDGA---KFDTIKPENKEI--G-AWELFYRYDSIKVEDDNIVVDSATR-EVGDA-KGKTHTLGVNWYAN----EAV-KVSANYVKAKTDKISNA------------NGDDSGDGLVMRLQYVF
25 Fugue 95.46100% -13 - C3 -2O4V PORP_PSEAE A:[1-411] ---------------------------------GTVTTDGADIVIKTKGGLE-----VATTDKEFSFKLGGRLQADYGRFDGYYTN-------NGNTADAAYFRRAYLEFGGT--A--YRDWKYQINYDLSRN-----------V--GNDSAGYFDEASVTYTG--------FNPVNLKF---GRFYTDFG-----LE-K-A-TSSKWV--TAL-ERN--L-T-Y--D----IA---D-WV-ND---NVGTGIQA-SS-V-V-----GGMAFLSGSVFSEN-NN-D---------------T------DGDSVKRYNLRGVFAPLHEPG-NVVHLG----LQYA---YRDLEDSAVDTRI--------RPRMG------MRGVSTNGGNDAGSNG---------NRGLFGGSS------AVEGLWKDDS--VWGLE-----GAWALG----A-FSA--QAEY-LRRTVKAER-----------------D------------------R-------------E--------------D---------LKASGYYAQLAYTL------TGEPRLYKLDGA---KFDTIKPENKEI--G-AWELFYRYDSIKVEDDNIVVDSATR-EVGDA-KGKTHTLGVNWYAN----EAV-KVSANYVKAKTDKISNA------------NGDDSGDGLVMRLQYVF
4 PsiBlast_CBE 95.21100% -14 - C3 -2O4V PORP_PSEAE B:[1-411] ---------------------------------GTVTTDGADIVIKTKGGLE-----VATTDKEFSFKLGGRLQADYGRFDGYYTN-------NGNTADAAYFRRAYLEFGGT--A--YRDWKYQINYDLSRN-----------V--GNDSAGYFDEASVTYTG--------FNPVNLKF---GRFYTDFG-----LE-K-A-TSSKWV--TAL-ERN--L-T-Y--D----IA---D-WV-ND---NVGTGIQA-SS-V-V-----GGMAFLSGSVFSEN-NN-D---------------T------DGDSVKRYNLRGVFAPLHEPG-NVVHLG----LQYA---YRDLEDSAVDTRI--------RPRMG------MRGVSTNGGNDAGSNG---------NRGLFGGSS------AVEGLWKDDS--VWGLE-----GAWALG----A-FSA--QAEY-LRRTVKAER-----------------D------------------R-------------E--------------D---------LKASGYYAQLAYTL------TGEPRLYKLDGA---KFDTIKPENKEI--G-AWELFYRYDSIKVEDDNIVVDSATR-EVGDA-KGKTHTLGVNWYAN----EAV-KVSANYVKAKTDKISNA------------NGDDSGDGLVMRLQYVF
1 PsiBlast_PDB 94.94100% -13 - C3 -2O4V PORP_PSEAE A:[1-411] ---------------------------------GTVTTDGADIVIKTKGGLE-----VATTDKEFSFKLGGRLQADYGRFDGYYTN-------NGNTADAAYFRRAYLEFGGT--A--YRDWKYQINYDLSRN-----------V--GNDSAGYFDEASVTYTG--------FNPVNLKF---GRFYTDFG-----LE-K-A-TSSKWV--TAL-ERN--L-T-Y--D----IA---D-WV-ND---NVGTGIQA-SS-V-V-----GGMAFLSGSVFSEN-NN-D---------------T------DGDSVKRYNLRGVFAPLHEPG-NVVHLG----LQYA---YRDLEDSAVDTRI--------RPRMG------MRGVSTNGGNDAGSNG---------NRGLFGGSS------AVEGLWKDDS--VWGLE-----GAWALG----A-FSA--QAEY-LRRTVKAER-----------------D------------------R-------------E--------------D---------LKASGYYAQLAYTL------TGEPRLYKLDGA---KFDTIKPENKEI--G-AWELFYRYDSIKVEDDNIVVDSATR-EVGDA-KGKTHTLGVNWYAN----EAV-KVSANYVKAKTDKISNA------------NGDDSGDGLVMRLQYVF
26 Fugue 51.1319% -18 - C2 -4O2X - MALE_ECOLI A:[5-483] EGKLVIWINGDKG--------YNGLAEVGKKFEKDT---GIKVTVEHPDKLEEKFPQVAATGDGPDIIFWA--HDRFGGYAQSGLL-------AEITPDKAFQDKLY-PFTWD--A--VRYNGKLIAYPIAVEALSL-------I--YNKD--LLPNPPKTWEE--------IPALDKELKAKGKSALMFN-----LQ-E-P-YFTWPL--IAA-DGG--Y-A-F--K----YE---N-GK-YD---IKDVGVDN-AG-A-K-----AGLTFLVDLIKNKHMNA-D---------------T------D---------YSIAEAAFNKGETAMTIN----GPWA---WSNIDTSKVNYGVTVLPTFKGQPSKP------FVGVLSAGINAASPN------------KELAKEF------LENYLLTDEG--LEAVNKDKPLGAVALK----S-YEE--ELAK-DPRIAATME-----------------N------------------A-------------Q--------------KGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALAAAQTNAAANLEKIKKLRNVI--TSAWKVILYNDDIH--NFTYVTDVIVK-VVGQISKAKAHTITVEAHST----GQA-LILSTWKSKAEKYCQEL------------QQN----GLTVSIIHES
32 Fugue 50.2917% -20 - C1 -4Y97 - DPOA2_HUMAN A:[157-598] -PSQKYNSRSNRGEVVTSFGLAQGVSWSGRGGAGNIS-------LKVLGCPE-----ALTGSYKSMFQ---KLPDIREVLTCKIEE-------LGSELKEHYKIEAFTPLLAP--A--------QEPVTLLGQ-----------I--GCDSNGKLNNKSVILEGDREHSSGAQIPVDLSE---LKEYSLFPGQVVIMEGI-N-TTGRKL--VAT-KLY--E-G-V--P----LP---F-YQ-PT---EEDADFEQ-SM-V-L-----VACGPYTTS----------------------------------DSITYDPLLDLIAVINHDR-PDVCILFGPFLDAK---HEQVENCLLTSPF--------EDIFKQCLRTIIEGTRSSGSHLVFVPS---------LRDVHHEPVYPQPPFSYSDLSREDKKQVQFVS-----EPCSLSINGVI-FGL--TSTD-LLFHLGAEE-----------------I------------------S-------------S--------------S---------SGTSDRFSRILKHI------LTQRSYYPLY----------PPQEDMA--I-DYESFYVYAQLPVTPDVLIIPSELRYFVKDV-LG---CVCVNPGRL----TKG-QVGGTFARLYLRRPAAD------------GAERQSPCIAVQVVRI-
12 HHSearch 41.9312% 8 - C3 -2POR PORI_RHOCA A:[1-301] -----------------------------------------------------------------EVKLSGDARMGVMYNGDDW--------------N--FSSRSRVLFTMSGTT--DSGLEFGASFKAHES-----------VGAETGEDGTVFL-----S---------GAFGKIEM---GDALGASE-----AL-F-GDLYEVGY--TDLDDRG--G-N-D--I----PY---L-TG-DERLTAEDNPVLLYTY-S-A-----GAFSV-AASMSDGK-VG-E---------------T------SEDDAQEMAVAAAYTF------GNYTVG----LGYE---KIDSPD--------------------------------------------------------------------TALMADME--QLELA-----AIAKFG----A-TNV--KAYY-ADGELDRDF-----------------ARAVFDLTPVAAA------A-------------T--------------A---------VDHKAYGLSVDSTF------GA------------------------------TTVGGYVQVLDIDT--------------ID-DVTYYGLGASYDLG----GGA-SIVGGIADNDLPN--------------------SDMVADLGVKFKF
10 HHSearch 41.4314% 30 - C3 -2FGQ OMP32_DELAC X:[3-332] -----------------------------------------------------------------SVTLFGIVDTNVAYVNKDAAGD------SRYGLGTSGASTSRLGLRGT--EDLGGGLKAGFWLEGEIFGDDGNASG---F--NFKRRSTVSL-----S---------GNFGEVRL---GRDLVPTS-----QK-L-TSYDLFSA--TG--IGP--F-M-GFRNWAAGQGA--D-DN-GI---RANNLISY-YTPN-F-----GGFNA-GFGYAFDE-KQ-TIG-------------T------ADSVGRYIGGYVAYDN------GPLSAS----LGLA---QQKTAV--------------------------------------------------------------------GGLATDRD--EITLG-----ASYNFG----V-AKL--SGLL-QQTKFKRDI------------------------------------G-------------G--------------D---------IKTNSYMLGASAPV------GG---------------------V--------GEVKLQYALYDQKAI-------------DS-KAHQITLGYVHNLS----KRT-ALYGNLAFLKNKDASTLGLQAKGVYAGGVQAGESQTGVQVGIRHAF
9 HHSearch 40.2813% 29 - C3 -2ZFG OMPF_ECOLI A:[6-340] -------------------------------------------------------------KDGNKVDLYGKAV-GLHYFSKG-GE--------NSYGGNGDMTYARLGFKGE--TQINSDLTGYGQWEYNFQGNNSEGADAQTG--NKTRLAFAGL-----KY--------ADVGSFDY---GRNYGVVY-----DALG-Y-TDMLP---EF--GGD--T-AYS--D----D------FF-VG---RVGGVATY-RN-S-NFFGLVDGLNF-AVQYLGKN-ERDT---------------A------RRSNGDGVGGSISYEY------EGFGIV----GAYG---AADRTNL---------------QEA--------------Q---------------------------------PLGNGKKAE--QWATG-----LKYDAN----N-IYL--AANY-GETRNATPITNKFTNT----------S------------------G-------------F--------------A---------NKTQDVLLVAQYQF------DF---------------------G--------LRPSIAYTKSKAKDVEG--------IGDVD-LVNYFEVGATYYFN----KNM-STYVDYIINQIDSDNK-------------LGVGSDDTVAVGIVYQF
11 HHSearch 38.6812% 18 - C3 -3VY8 ? X:[15-355] -----------------------------------------------------------------QVTLYGTIKAGVEVSRVKDAGTYKAQGGKSKTATQIADFGSKIGFKGQ--EDLGNGMKAIWQLEQKASIAGTNS-----G--WGNRQSFIGL-----K---------GGFGTVRA---GNLNTVLK-----DS-GDN-VNA------W--ESG--SNT-E--D----VLGLGTIGR-VE---SREISVRY-DS-PVF-----AGFSG-SVQYVPRD-NA-N---------------DVDKYKHTKSSRESYHAGLKYEN------AGFFGQ----YAGSFAKYADLNTD----AE--------RVAV--------------NTA-------------------------------NAHPVKDYQ--VHRVV-----AGYDAN----D-LYVSVAGQY-EAAKNNEVG-----------------SIK----------------G-------------K--------------K---------HEQTQVAATAAYRF------GN------------------------------VTPRVSYAHGFKAKVNG------V-KDANY-QYDQVIVGADYDFS----KRT-SALVSAGWLKQGKGA---------------GKVEQTASMVGLRHKF
8 HHSearch 38.5912% 32 - C3 -3NSG OMPF_SALTY A:[6-341] -------------------------------------------------------------KDGNKLDLYGKAVGRHVWTTTGDS-------------KNADQTYAQIGFKGE--TQINTDLTGFGQWEYRTKADRAEGEQQN-S--NLVRLAFAGL-----KY--------AEVGSIDY---GRNYGIVY-----DVES-Y-TDMAPY--FSG-ETWGGA-Y-T--D----N------YM-TS---RAGGLLTY-RN-S-DFFGLVDGLSF-GIQYQGKN-QD-NHS-------------I------NSQNGDGVGYTMAYEF------DGFGVT----AAYS---NSKRTND--------------QQ--D---------------R--------------------------------DGNGDRAE--SRAVG-----AKYDAN----N-VYL--AAVY-AETRNMSIV-----------------ENTVTDTV-----------E-------------M--------------A---------NKTQNLEVVAQYQF------DF---------------------G--------LRPAISYVQSKGKQLNG------A-GGSAD-LAKYIQAGATYYFN----KNM-NVWVDYRFNLLDENDYSS-----------SYVGTDDQAAVGITYQF
7 HHSearch 38.1711% 19 - C3 -3WI5 OMPB1_NEIMB A:[1-312] -----------------------------------------------------------------DVTLYGTIKAGVETSRSVFHQNGQVT--EVTTATGIVDLGSKIGFKGQ--EDLGNGLKAIWQVEQKASIAGTDS-----G--WGNRQSFIGL-----K---------GGFGKLRV---GRLNSVLK-----DT-G-D-INP-WD--SKS-DYL--G-V-N--K----I------AE-PE---ARLISVRY-DS-PEF-----AGLSG-SVQYALND-NA-G-----------------------RHNSESYHAGFNYKN------GGFFVQ----YGGA---YKRHHQV---------------Q--------------------------------------------------EGLNIEKYQ--IHRLV-----SGYDND----A-LYA--SVAV-QQQDAKLTDA----------------S------------------N-------------S--------------H---------NSQTEVAATLAYRF------GN------------------------------VTPRVSYAHGFKGLVAK--------ADIGN-RYDQVVVGAEYDFS----KRT-SALVSAGWLQEGKGE---------------NKFVATAGGVGLRHKF
30 Fugue 37.1114% -8 - C2 -4ECF ? A:[2-261] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-G-ESITAVGSTAL-QPL--V-E-A--A----GE---Q-YT-GE---HLGTFINV-QG---------GGTGTGLSQIQEGA-VQ-I---------------G------NSDLFAGEQ-KGINARQLVDH-RVAVVG----ITPI---V----NKKVGVKN--------LSTNQ------LIKIFTGQITNWKEVGGADQSIVLINRA--QGSG------TRATFEQF------GLA-----NHRSKT----A-QEQ--DSSGMVRSIVATT-------------------------------------------------------------------------------PGAISYVAFSY------VNK----TVQAL---SLNHVAPTEVNVTTN-DWRIWSYEHLYTKGHPTGLTKAFIT-YVQSP-AIQNTLVRQLGYLS----PDQMLVERDANGHITKT---------------------------------
6 HHSearch 35.7312% 32 - C3 -2J1N OMPC_ECOLI A:[6-346] -------------------------------------------------------------KDGNKLDLYGKVDGLHYFSDNKD--------------VDGDQTYMRLGFKGETQV--TDQLTGYGQWEYQIQGNSAENEN---N--SWTRVAFAGL-----KF--------QDVGSFDY---GRNYGVVY-----DVTS-W-TDVLPE--FGG-DTY----G-S--D----N------FM-QQ---RGNGFATY-RN-T-DFFGLVDGLNF-AVQYQGKN-GN-PSGEGFTSGVTNNGRDA------LRQNGDGVGGSITYDY------EGFGIG----GAIS---SSKRTDA---------------QN-----------------T-AA----------------------------YIGNGDRAE--TYTGG-----LKYDAN----N-IYL--AAQY-TQTYNATRVGS---------------L------------------G-------------W--------------A---------NKAQNFEAVAQYQF------DF---------------------G--------LRPSLAYLQSKGKNLGRG-------YDDED-ILKYVDVGATYYFN----KNM-STYVDYKINLLDDNQFTRD----------AGINTDNIVALGLVYQF
5 HHSearch 35.5910% 31 - C3 -1PHO - PHOE_ECOLI A:[6-340] -------------------------------------------------------------KDGNKLDVYGKVKAMHYMSDNASK------------DGDQSYIRFGFKGETQ--I--NDQLTGYGRWEAEFAGNKAESDTA--Q--QKTRLAFAGL-----KY--------KDLGSFDY---GRNLGALY-----DVEA-W-TDMF----PEF-GGD--S---A--Q----T----D-NFMTK---RASGLATY-RN-T-DFFGVIDGLNL-TLQYQGKN-EN-RD--------------V------KKQNGDGFGTSLTYDFG------DFAIS----GAYT---NSDRTNE---------------QNL-----------------Q------------------------------SRGTGKRAE--AWATG-----LKYDAN----N-IYL--ATFY-SETRKMTPIT----------------G------------------G-------------F--------------A---------NKTQNFEAVAQYQF------DF---------------------G--------LRPSLGYVLSKGKDIEG--------IGDED-LVNYIDVGATYYFN----KNM-SAFVDYKINQLDSDNK-------------LNINNDDIVAVGMTYQF
14 HHSearch 32.9515% 41 - C3 -3T24 ? A:[254-398] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDNK--ALNAM-----FTYSLG----Y-HAF--GVGY-QKMSGDTGFAYINGADPYLVNFIQIGD------------------F-------------A--------------N---------KDEKSWQARYDYNF------AG-------------------V---GI--P-GLTFMTRYVKGDNIDLLTT--------SGEG-KEWERDMDIAYVFQSGPLKNL-GVKWRNATMRTNY------------------TNDYDENRLIVSYTL
16 HHSearch 32.4311% 34 - C3 -2Y0L - ? A:[254-399] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIDNK--SLNGM-----FTYSLG----N-HAF--GAAW-QRMNGDDAFPYLE-------------G------------------SNPYLVNFVQVNDFA--------------G---------PKERSWQLRYDYDF------VG-----------------L-----GI--P-GLTFMTRYVKGDNVELAG--------Q-GEG-REWERNTELQYVFQSGALKNL-GIRWRNATFRSNF------------------TRDIDENRLIVSYTL
15 HHSearch 31.6910% 42 - C3 -2Y0H ? A:[243-388] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDNR--NLNAM-----LTLRAG----A-HAF--GIGV-QKMIGNDAF-----------------PVLNGYTTPYVANLMAYQTF-------------T--------------R---------PQEKSWQLRYDYDF------AGL----------------------GL--P-GLNLMTRYVQGRDIDRGA--------GRADD-SEWERNTDLSYVIQSGPLKSV-ALKWRNITYRSRYG------------------ADLDENRFIVNYTL
20 HHSearch 30.8215% 32 - C3 -3SZV ? A:[254-398] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELDNR--AFGAL-----FSLRLG----A-HAV--AAGY-QRISGDDPY-----------------PYIA---------------G-------------SDPYLVNFIQIGDFGN---------VDERSWQLRYDYDF------GA-----------------L-----GL--P-GLSFMSRYVSGDNVARGA---------ANDG-KEWERNTDLGYVVQSGPLKNL-GVKWRNATVRSNF------------------ANDLDENRLILSYSL
13 HHSearch 30.1910% -4 - C3 -3PRN PORI_RHOBL A:[192-289] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D--IAFVG-----AAYKFN----DAGTV--GLNW-YDNGL---------------------------------------------------------------------S---------TAGDQVTLYGNYAF------GA------------------------------TTVRAYVSDIDRA----------------G-ADTAYGIGADYQFA----EGV-KVSGSVQSGFAN----------------------ETVADVGVRFDF