@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA3279: (2016-02-15 )
MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAYRDWKYQINYDLSRNVGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEKATSSKWVTALERNLTYDIADWVNDNVGTGIQASSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLRRTVKAERDREDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF
Atome Classification :
(20 SA)
----.........10........20........30........40.......-----.50........60........70......-------..80........90......--.--.100.......110.-----------.--.....120.......130-------........---140.....-----..-150-......--..160..--.-.-.--.----..---170.-..---.....180-..-.-.-----...190.......200.-.---------------.------.....210.......220...-....230---....---....240......--------.250.------......260.......---------270......------.280......--.290.-----......----300..--....-..310....-----------------.------------------.-------------.--------------320-------.........330..------.....340....---...350......--.-360.......370.......380..-.....-390.......400.----...-...410.......420.------------......430.......440
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
----MIRRHSCKGV
G
S
S
V
A
W
S
L
L
G
L
A
I
S
A
Q
S
L
A
G
T
V
TTDG
A
D
I
V
I
KTKG
G
L
E
-----
V
A
TTDK
E
F
S
F
K
LG
G
R
L
Q
ADYGRFD
G
Y
Y
TN-------NGN
T
A
D
A
A
Y
F
R
R
A
Y
L
E
FGGT--
A
--
Y
R
D
W
K
Y
Q
I
N
Y
D
LSRN-----------V--GNDSAGYFDE
A
S
V
T
Y
TG--------F
N
P
V
N
L
K
F---G
R
F
Y
TDFG-----LE-K-A-TS
S
K
W
V
--
T
A
L
-
E
RN--L-
T
-
Y
--
D
----
I
A
---
D
-
W
V-ND---NVGTGI
Q
A
-
S
S
-V-V-----G
G
M
A
F
LS
G
S
VFSEN-NN-D---------------T------DGD
S
V
K
R
Y
NLR
G
V
FAPLHEPG-
N
V
V
H
L
G
----
L
Q
Y
A
---
Y
R
D
LEDSAVDTRI--------RPRMG------MRGVSTNGGNDAGSNG---------NRGLFG
G
S
S
------
A
V
E
GLWKDDS--VWGLE-----G
A
W
ALG----
A
-
F
S
A
--
Q
A
E
Y
-
L
R
R
T
V
K
AER-----------------
D
------------------
R
-------------
E
--------------
D
---------LKASG
Y
Y
A
Q
L
A
Y
T
L------TGE
P
R
L
Y
K
LDGA---KFDTIKPENKEI--G-
A
W
E
L
F
Y
R
YDS
I
K
V
EDD
N
I
V
V
DSATR-EVGDA-KGK
T
H
T
L
G
V
N
W
YAN----
E
A
V
-
K
V
SA
N
Y
V
K
AKTDKISNA------------NGDDSGD
G
L
V
M
R
L
Q
YVF
3
PsiBlast_CBE
95.64
100%
-15
- C3 -
2O4V
7
PORP_PSEAE
C:
[1-411]
---------------------------------
G
T
V
T
T
D
G
A
D
I
V
I
K
T
K
G
G
L
E
-----
V
A
T
T
D
K
E
F
S
F
K
L
G
G
R
L
Q
A
D
Y
G
R
F
D
G
Y
Y
T
N
-------
N
G
N
T
A
D
A
A
Y
F
R
R
A
Y
L
E
F
G
G
T
--
A
--
Y
R
D
W
K
Y
Q
I
N
Y
D
L
S
R
N
-----------
V
--
G
N
D
S
A
G
Y
F
D
E
A
S
V
T
Y
T
G
--------
F
N
P
V
N
L
K
F
---
G
R
F
Y
T
D
F
G
-----
L
E
-
K
-
A
-
T
S
S
K
W
V
--
T
A
L
-
E
R
N
--
L
-
T
-
Y
--
D
----
I
A
---
D
-
W
V
-
N
D
---
N
V
G
T
G
I
Q
A
-
S
S
-
V
-
V
-----
G
G
M
A
F
L
S
G
S
V
F
S
E
N
-
N
N
-
D
---------------
T
------
D
G
D
S
V
K
R
Y
N
L
R
G
V
F
A
P
L
H
E
P
G
-
N
V
V
H
L
G
----
L
Q
Y
A
---
Y
R
D
L
E
D
S
A
V
D
T
R
I
--------
R
P
R
M
G
------
M
R
G
V
S
T
N
G
G
N
D
A
G
S
N
G
---------
N
R
G
L
F
G
G
S
S
------
A
V
E
G
L
W
K
D
D
S
--
V
W
G
L
E
-----
G
A
W
A
L
G
----
A
-
F
S
A
--
Q
A
E
Y
-
L
R
R
T
V
K
A
E
R
-----------------
D
------------------
R
-------------
E
--------------
D
---------
L
K
A
S
G
Y
Y
A
Q
L
A
Y
T
L
------
T
G
E
P
R
L
Y
K
L
D
G
A
---
K
F
D
T
I
K
P
E
N
K
E
I
--
G
-
A
W
E
L
F
Y
R
Y
D
S
I
K
V
E
D
D
N
I
V
V
D
S
A
T
R
-
E
V
G
D
A
-
K
G
K
T
H
T
L
G
V
N
W
Y
A
N
----
E
A
V
-
K
V
S
A
N
Y
V
K
A
K
T
D
K
I
S
N
A
------------
N
G
D
D
S
G
D
G
L
V
M
R
L
Q
Y
V
F
25
Fugue
95.46
100%
-13
- C3 -
2O4V
8
PORP_PSEAE
A:
[1-411]
---------------------------------
G
T
V
T
T
D
G
A
D
I
V
I
K
T
K
G
G
L
E
-----
V
A
T
T
D
K
E
F
S
F
K
L
G
G
R
L
Q
A
D
Y
G
R
F
D
G
Y
Y
T
N
-------
N
G
N
T
A
D
A
A
Y
F
R
R
A
Y
L
E
F
G
G
T
--
A
--
Y
R
D
W
K
Y
Q
I
N
Y
D
L
S
R
N
-----------
V
--
G
N
D
S
A
G
Y
F
D
E
A
S
V
T
Y
T
G
--------
F
N
P
V
N
L
K
F
---
G
R
F
Y
T
D
F
G
-----
L
E
-
K
-
A
-
T
S
S
K
W
V
--
T
A
L
-
E
R
N
--
L
-
T
-
Y
--
D
----
I
A
---
D
-
W
V
-
N
D
---
N
V
G
T
G
I
Q
A
-
S
S
-
V
-
V
-----
G
G
M
A
F
L
S
G
S
V
F
S
E
N
-
N
N
-
D
---------------
T
------
D
G
D
S
V
K
R
Y
N
L
R
G
V
F
A
P
L
H
E
P
G
-
N
V
V
H
L
G
----
L
Q
Y
A
---
Y
R
D
L
E
D
S
A
V
D
T
R
I
--------
R
P
R
M
G
------
M
R
G
V
S
T
N
G
G
N
D
A
G
S
N
G
---------
N
R
G
L
F
G
G
S
S
------
A
V
E
G
L
W
K
D
D
S
--
V
W
G
L
E
-----
G
A
W
A
L
G
----
A
-
F
S
A
--
Q
A
E
Y
-
L
R
R
T
V
K
A
E
R
-----------------
D
------------------
R
-------------
E
--------------
D
---------
L
K
A
S
G
Y
Y
A
Q
L
A
Y
T
L
------
T
G
E
P
R
L
Y
K
L
D
G
A
---
K
F
D
T
I
K
P
E
N
K
E
I
--
G
-
A
W
E
L
F
Y
R
Y
D
S
I
K
V
E
D
D
N
I
V
V
D
S
A
T
R
-
E
V
G
D
A
-
K
G
K
T
H
T
L
G
V
N
W
Y
A
N
----
E
A
V
-
K
V
S
A
N
Y
V
K
A
K
T
D
K
I
S
N
A
------------
N
G
D
D
S
G
D
G
L
V
M
R
L
Q
Y
V
F
4
PsiBlast_CBE
95.21
100%
-14
- C3 -
2O4V
6
PORP_PSEAE
B:
[1-411]
---------------------------------
G
T
V
T
T
D
G
A
D
I
V
I
K
T
K
G
G
L
E
-----
V
A
T
T
D
K
E
F
S
F
K
L
G
G
R
L
Q
A
D
Y
G
R
F
D
G
Y
Y
T
N
-------
N
G
N
T
A
D
A
A
Y
F
R
R
A
Y
L
E
F
G
G
T
--
A
--
Y
R
D
W
K
Y
Q
I
N
Y
D
L
S
R
N
-----------
V
--
G
N
D
S
A
G
Y
F
D
E
A
S
V
T
Y
T
G
--------
F
N
P
V
N
L
K
F
---
G
R
F
Y
T
D
F
G
-----
L
E
-
K
-
A
-
T
S
S
K
W
V
--
T
A
L
-
E
R
N
--
L
-
T
-
Y
--
D
----
I
A
---
D
-
W
V
-
N
D
---
N
V
G
T
G
I
Q
A
-
S
S
-
V
-
V
-----
G
G
M
A
F
L
S
G
S
V
F
S
E
N
-
N
N
-
D
---------------
T
------
D
G
D
S
V
K
R
Y
N
L
R
G
V
F
A
P
L
H
E
P
G
-
N
V
V
H
L
G
----
L
Q
Y
A
---
Y
R
D
L
E
D
S
A
V
D
T
R
I
--------
R
P
R
M
G
------
M
R
G
V
S
T
N
G
G
N
D
A
G
S
N
G
---------
N
R
G
L
F
G
G
S
S
------
A
V
E
G
L
W
K
D
D
S
--
V
W
G
L
E
-----
G
A
W
A
L
G
----
A
-
F
S
A
--
Q
A
E
Y
-
L
R
R
T
V
K
A
E
R
-----------------
D
------------------
R
-------------
E
--------------
D
---------
L
K
A
S
G
Y
Y
A
Q
L
A
Y
T
L
------
T
G
E
P
R
L
Y
K
L
D
G
A
---
K
F
D
T
I
K
P
E
N
K
E
I
--
G
-
A
W
E
L
F
Y
R
Y
D
S
I
K
V
E
D
D
N
I
V
V
D
S
A
T
R
-
E
V
G
D
A
-
K
G
K
T
H
T
L
G
V
N
W
Y
A
N
----
E
A
V
-
K
V
S
A
N
Y
V
K
A
K
T
D
K
I
S
N
A
------------
N
G
D
D
S
G
D
G
L
V
M
R
L
Q
Y
V
F
1
PsiBlast_PDB
94.94
100%
-13
- C3 -
2O4V
8
PORP_PSEAE
A:
[1-411]
---------------------------------
G
T
V
T
T
D
G
A
D
I
V
I
K
T
K
G
G
L
E
-----
V
A
T
T
D
K
E
F
S
F
K
L
G
G
R
L
Q
A
D
Y
G
R
F
D
G
Y
Y
T
N
-------
N
G
N
T
A
D
A
A
Y
F
R
R
A
Y
L
E
F
G
G
T
--
A
--
Y
R
D
W
K
Y
Q
I
N
Y
D
L
S
R
N
-----------
V
--
G
N
D
S
A
G
Y
F
D
E
A
S
V
T
Y
T
G
--------
F
N
P
V
N
L
K
F
---
G
R
F
Y
T
D
F
G
-----
L
E
-
K
-
A
-
T
S
S
K
W
V
--
T
A
L
-
E
R
N
--
L
-
T
-
Y
--
D
----
I
A
---
D
-
W
V
-
N
D
---
N
V
G
T
G
I
Q
A
-
S
S
-
V
-
V
-----
G
G
M
A
F
L
S
G
S
V
F
S
E
N
-
N
N
-
D
---------------
T
------
D
G
D
S
V
K
R
Y
N
L
R
G
V
F
A
P
L
H
E
P
G
-
N
V
V
H
L
G
----
L
Q
Y
A
---
Y
R
D
L
E
D
S
A
V
D
T
R
I
--------
R
P
R
M
G
------
M
R
G
V
S
T
N
G
G
N
D
A
G
S
N
G
---------
N
R
G
L
F
G
G
S
S
------
A
V
E
G
L
W
K
D
D
S
--
V
W
G
L
E
-----
G
A
W
A
L
G
----
A
-
F
S
A
--
Q
A
E
Y
-
L
R
R
T
V
K
A
E
R
-----------------
D
------------------
R
-------------
E
--------------
D
---------
L
K
A
S
G
Y
Y
A
Q
L
A
Y
T
L
------
T
G
E
P
R
L
Y
K
L
D
G
A
---
K
F
D
T
I
K
P
E
N
K
E
I
--
G
-
A
W
E
L
F
Y
R
Y
D
S
I
K
V
E
D
D
N
I
V
V
D
S
A
T
R
-
E
V
G
D
A
-
K
G
K
T
H
T
L
G
V
N
W
Y
A
N
----
E
A
V
-
K
V
S
A
N
Y
V
K
A
K
T
D
K
I
S
N
A
------------
N
G
D
D
S
G
D
G
L
V
M
R
L
Q
Y
V
F
26
Fugue
51.13
19%
-18
- C2 -
4O2X
-
MALE_ECOLI
A:
[5-483]
EG
K
L
V
I
W
I
N
G
D
K
G
--------
Y
N
G
L
A
E
V
G
K
K
F
E
K
D
T
---
G
I
K
V
T
V
E
H
P
D
K
L
E
E
K
F
P
Q
V
A
A
T
G
D
G
P
D
I
I
F
W
A
--
H
D
R
F
G
G
Y
A
Q
S
G
L
L
-------
A
E
I
T
P
D
K
A
F
Q
D
K
L
Y
-
P
F
T
W
D
--
A
--
V
R
Y
N
G
K
L
I
A
Y
P
I
A
V
E
A
L
S
L-------
I
--
Y
N
K
D
--
L
L
P
N
P
P
K
T
W
E
E
--------
I
P
A
L
D
K
E
L
K
A
K
G
K
S
A
L
M
F
N
-----
L
Q
-
E
-
P
-
Y
F
T
W
P
L
--
I
A
A
-
D
G
G
--
Y
-
A
-
F
--
K
----
Y
E
---
N
-
G
K
-
Y
D
---
I
K
D
V
G
V
D
N
-
A
G
-
A
-
K
-----
A
G
L
T
F
L
V
D
L
I
K
N
K
H
M
N
A
-
D
---------------
T
------
D
---------
Y
S
I
A
E
A
A
F
N
K
G
E
T
A
M
T
I
N
----
G
P
W
A
---
W
S
N
I
D
T
S
K
V
N
Y
G
V
T
V
L
P
T
F
KG
Q
P
S
K
P
------
F
V
G
V
L
S
A
G
I
N
A
A
S
P
N
------------
K
E
L
A
K
E
F
------
L
E
N
Y
L
L
T
D
E
G
--
L
E
A
V
N
K
D
KPL
G
A
V
A
L
K
----
S
-
Y
E
E
--
E
L
A
K
-
D
P
R
I
A
A
T
M
E
-----------------
N
------------------
A
-------------
Q
--------------
K
GEIMPNIPQ
M
S
A
F
W
Y
A
V
R
T
A
V
I
N
A
A
S
GRQ
T
V
D
E
A
L
A
A
A
Q
T
N
A
A
A
N
L
E
K
I
K
K
L
R
N
V
I
--
T
S
A
W
K
V
I
L
Y
N
D
D
I
H
--
N
F
T
Y
V
T
D
V
I
V
K
-
V
V
G
Q
I
S
K
A
K
A
H
T
I
T
V
E
A
H
S
T
----
G
Q
A
-
L
I
L
S
T
W
K
S
K
A
E
K
Y
C
Q
E
L
------------
Q
Q
N
----
G
L
T
V
S
I
I
H
E
S
32
Fugue
50.29
17%
-20
- C1 -
4Y97
-
DPOA2_HUMAN
A:
[157-598]
-PS
Q
K
Y
N
S
R
S
N
R
G
E
V
V
T
S
F
G
L
A
Q
G
V
S
W
S
G
R
G
G
A
G
N
I
S
-------
L
K
V
L
G
C
P
E
-----
A
L
T
G
S
Y
K
S
M
F
Q
---
K
L
P
D
I
R
E
V
L
T
C
K
I
E
E
-------
L
G
S
E
L
K
E
H
Y
K
I
E
A
F
T
P
L
L
A
P
--
A
--------
Q
E
P
V
T
L
L
G
Q
-----------
I
--
G
C
D
S
N
G
K
L
N
N
K
S
V
I
L
E
G
D
REHSSG
A
Q
I
P
V
D
L
S
E
---
L
K
E
Y
S
L
F
P
G
Q
V
V
I
M
E
G
I
-
N
-
T
T
G
R
K
L
--
V
A
T
-
K
L
Y
--
E
-
G
-
V
--
P
----
L
P
---
F
-
Y
Q
-
P
T
---
E
E
D
A
D
F
E
Q
-
S
M
-
V
-
L
-----
V
A
C
G
P
Y
T
T
S
----------------------------------
D
S
I
T
Y
D
P
L
L
D
L
I
A
V
I
N
H
D
R
-
P
D
V
C
I
L
F
G
PF
L
D
A
K
---
H
E
Q
V
E
N
C
L
L
T
S
P
F
--------
E
D
I
F
K
Q
C
L
R
T
I
I
E
G
T
R
S
S
G
S
H
L
V
F
V
P
S
---------
L
R
D
V
H
H
E
P
V
YPQ
P
P
F
S
Y
S
D
L
S
R
E
D
K
K
Q
V
Q
F
V
S
-----
E
P
C
S
L
S
I
NG
V
I
-
F
G
L
--
T
S
T
D
-
L
L
F
H
L
G
A
E
E
-----------------
I
------------------
S
-------------
S
--------------
S
---------
S
G
T
S
D
R
F
S
R
I
L
K
H
I
------
L
T
Q
R
S
Y
Y
P
L
Y
----------
P
P
Q
E
D
M
A
--
I
-
D
Y
E
S
F
Y
V
Y
A
Q
L
P
V
T
P
D
V
L
I
I
P
S
E
L
R
Y
F
V
K
D
V
-
L
G
---
C
V
C
V
N
P
G
R
L
----
T
K
G
-
Q
V
G
G
T
F
A
R
L
Y
L
R
R
P
A
A
D
------------
G
A
E
R
Q
S
P
C
I
A
V
Q
V
V
R
I
-
12
HHSearch
41.93
12%
8
- C3 -
2POR
7
PORI_RHOCA
A:
[1-301]
-----------------------------------------------------------------
E
V
K
L
S
G
D
A
R
M
G
V
M
Y
N
G
D
D
W
--------------
N
--
F
S
S
R
S
R
V
L
F
T
M
S
GT
T
--
D
S
G
L
E
F
G
A
S
F
K
A
H
E
S
-----------
V
G
A
E
T
G
E
D
G
T
V
F
L
-----
S
---------
G
A
F
G
K
I
E
M
---
G
D
A
L
G
A
S
E
-----
A
L
-
F
-
G
D
L
Y
E
V
G
Y
--
T
D
L
D
D
R
G
--
G
-
N
-
D
--
I
----
P
Y
---
L
-
T
G
-
D
E
RLT
A
E
D
N
P
V
L
L
Y
T
Y
-
S
-
A
-----
G
A
F
S
V
-
A
A
S
M
S
D
G
K
-
V
G
-
E
---------------
T
------
S
E
D
D
A
Q
E
M
A
V
A
A
A
Y
T
F
------
G
N
Y
T
V
G
----
L
G
Y
E
---
K
I
D
S
P
D
--------------------------------------------------------------------
T
A
L
M
A
D
M
E
--
Q
L
E
L
A
-----
A
I
A
K
F
G
----
A
-
T
N
V
--
K
A
Y
Y
-
A
D
G
E
L
D
R
D
F
-----------------
A
R
A
V
F
D
L
T
P
V
AA
A
------
A
-------------
T
--------------
A
---------
V
D
H
K
A
Y
G
L
S
V
D
S
T
F
------
G
A
------------------------------
T
T
V
G
G
Y
V
Q
V
L
D
I
D
T
--------------
I
D
-
D
V
T
Y
Y
G
L
G
A
S
Y
D
L
G
----
G
G
A
-
S
I
V
G
G
I
A
D
N
D
L
P
N
--------------------
S
D
M
V
A
D
L
G
V
K
F
K
F
10
HHSearch
41.43
14%
30
- C3 -
2FGQ
7
OMP32_DELAC
X:
[3-332]
-----------------------------------------------------------------
S
V
T
L
F
G
I
V
D
T
N
V
A
Y
V
N
K
D
A
A
G
D------
S
R
Y
G
L
G
T
S
G
A
S
T
S
R
L
G
L
R
G
T
--
E
DL
G
G
G
L
K
A
G
F
W
L
E
G
E
I
F
GDDGNASG---
F
--
N
F
K
R
R
S
T
V
S
L
-----
S
---------
G
N
F
G
E
V
R
L
---
G
R
D
L
V
P
T
S
-----
Q
K
-
L
-
T
S
Y
D
L
F
S
A
--
T
G
--
I
G
P
--
F
-
M
-
G
FR
N
WAAG
Q
G
A--
D
-
D
N
-
G
I
---
R
A
N
N
L
I
S
Y
-
Y
T
P
N
-
F
-----
G
G
F
N
A
-
G
F
G
Y
A
F
D
E
-
K
Q
-
T
IG-------------
T
------
A
D
S
V
G
R
Y
I
G
G
Y
V
A
Y
D
N
------
G
P
L
S
A
S
----
L
G
L
A
---
Q
Q
K
T
A
V
--------------------------------------------------------------------
G
G
L
A
T
D
R
D
--
E
I
T
L
G
-----
A
S
Y
N
F
G
----
V
-
A
K
L
--
S
G
L
L
-
Q
Q
T
K
F
K
R
D
I
------------------------------------
G
-------------
G
--------------
D
---------
I
K
T
N
S
Y
M
L
G
A
S
A
P
V
------
G
G
---------------------
V
--------
G
E
V
K
L
Q
Y
A
L
Y
D
Q
K
A
I
-------------
D
S
-
K
A
H
Q
I
T
L
G
Y
V
H
N
L
S
----
K
R
T
-
A
L
Y
G
N
L
A
F
L
K
N
K
D
A
S
T
L
GLQAKGVYAGGV
Q
A
G
E
S
Q
T
G
V
Q
V
G
I
R
H
A
F
9
HHSearch
40.28
13%
29
- C3 -
2ZFG
2
OMPF_ECOLI
A:
[6-340]
-------------------------------------------------------------
K
D
G
N
K
V
D
L
Y
G
K
A
V
-
G
L
H
Y
F
S
K
G
-
G
E
--------
N
S
Y
G
G
N
G
D
M
T
Y
A
R
L
G
F
K
G
E
--
T
QI
N
S
D
L
T
G
Y
G
Q
W
E
Y
N
F
Q
GNNSEGADAQT
G
--
N
K
T
R
L
A
F
A
G
L
-----
K
Y
--------
A
D
V
G
S
F
D
Y
---
G
R
N
Y
G
V
V
Y
-----
D
A
L
G
-
Y
-
T
D
M
L
P
---
E
F
--
G
G
D
--
T
-
A
Y
S
--
D
----
D
------
F
F
-
V
G
---
R
V
G
G
V
A
T
Y
-
R
N
-
S
-
N
FFGLV
D
G
L
N
F
-
A
V
Q
Y
L
G
K
N
-
E
R
D
T
---------------
A
------
R
R
S
N
G
D
G
V
G
G
S
I
S
Y
E
Y
------
E
G
F
G
I
V
----
G
A
Y
G
---
A
A
D
R
T
N
L
---------------
Q
E
A
--------------
Q
---------------------------------
P
L
G
N
G
K
K
A
E
--
Q
W
A
T
G
-----
L
K
Y
D
A
N
----
N
-
I
Y
L
--
A
A
N
Y
-
G
E
T
R
N
A
T
P
I
T
NKFTN
T
----------
S
------------------
G
-------------
F
--------------
A
---------
N
K
T
Q
D
V
L
L
V
A
Q
Y
Q
F
------
D
F
---------------------
G
--------
L
R
P
S
I
A
Y
T
K
S
K
A
K
D
V
E
G
--------
I
G
D
V
D
-
L
V
N
Y
F
E
V
G
A
T
Y
Y
F
N
----
K
N
M
-
S
T
Y
V
D
Y
I
I
N
Q
I
D
S
D
N
K
-------------
L
G
V
G
S
D
D
T
V
A
V
G
I
V
Y
Q
F
11
HHSearch
38.68
12%
18
- C3 -
3VY8
2
?
X:
[15-355]
-----------------------------------------------------------------
Q
V
T
L
Y
G
T
I
K
A
G
V
E
V
S
R
V
K
D
A
G
TYKAQGG
K
S
K
T
A
T
Q
I
A
D
F
G
S
K
I
G
F
K
G
Q
--
E
DL
G
N
G
M
K
A
I
W
Q
L
E
Q
K
A
S
IAGTNS-----
G
--
W
G
N
R
Q
S
F
I
G
L
-----
K
---------
G
G
F
G
T
V
R
A
---
G
N
L
N
T
V
L
K
-----
D
S
-
G
D
N
-
V
N
A
------
W
--
E
S
G
--
S
N
T
-
E
--
D
----
V
L
GLG
T
I
G
R
-
V
E
---
S
R
E
I
S
V
R
Y
-
D
S
-
P
V
F
-----
A
G
F
S
G
-
S
V
Q
Y
V
P
R
D
-
N
A
-
N
---------------
D
VDKYKH
T
K
S
S
R
E
S
Y
H
A
G
L
K
Y
E
N
------
A
G
F
F
G
Q
----
Y
A
G
S
FAK
Y
A
D
L
N
T
D
----
A
E
--------
R
V
A
V
--------------
N
T
A
-------------------------------
N
A
H
P
V
K
D
Y
Q
--
V
H
R
V
V
-----
A
G
Y
D
A
N
----
D
-
L
Y
V
SV
A
G
Q
Y
-
E
A
A
K
N
N
E
V
G
-----------------
S
IK----------------
G
-------------
K
--------------
K
---------
H
E
Q
T
Q
V
A
A
T
A
A
Y
R
F
------
G
N
------------------------------
V
T
P
R
V
S
Y
A
H
G
F
K
A
K
V
N
G
------
V
-
K
D
A
N
Y
-
Q
Y
D
Q
V
I
V
G
A
D
Y
D
F
S
----
K
R
T
-
S
A
L
V
S
A
G
W
L
K
Q
G
K
G
A
---------------
G
K
V
E
Q
T
A
S
M
V
G
L
R
H
K
F
8
HHSearch
38.59
12%
32
- C3 -
3NSG
18
OMPF_SALTY
A:
[6-341]
-------------------------------------------------------------
K
D
G
N
K
L
D
L
Y
G
K
A
V
G
R
H
V
W
T
T
T
G
D
S
-------------
K
N
A
D
Q
T
Y
A
Q
I
G
F
K
G
E
--
T
QI
N
T
D
L
T
G
F
G
Q
W
E
Y
R
T
K
ADRAEGEQQN-
S
--
N
L
V
R
L
A
F
A
G
L
-----
K
Y
--------
A
E
V
G
S
I
D
Y
---
G
R
N
Y
G
I
V
Y
-----
D
V
E
S
-
Y
-
T
D
M
A
P
Y
--
F
S
G
-
E
T
W
GG
A
-
Y
-
T
--
D
----
N
------
Y
M
-
T
S
---
R
A
G
G
L
L
T
Y
-
R
N
-
S
-
D
FFGLV
D
G
L
S
F
-
G
I
Q
Y
Q
G
K
N
-
Q
D
-
N
HS-------------
I
------
N
S
Q
N
G
D
G
V
G
Y
T
M
A
Y
E
F
------
D
G
F
G
V
T
----
A
A
Y
S
---
N
S
K
R
T
N
D
--------------
Q
Q
--
D
---------------
R
--------------------------------
D
G
N
G
D
R
A
E
--
S
R
A
V
G
-----
A
K
Y
D
A
N
----
N
-
V
Y
L
--
A
A
V
Y
-
A
E
T
R
N
M
S
I
V
-----------------
E
NTVT
D
T
V
-----------
E
-------------
M
--------------
A
---------
N
K
T
Q
N
L
E
V
V
A
Q
Y
Q
F
------
D
F
---------------------
G
--------
L
R
P
A
I
S
Y
V
Q
S
K
G
K
Q
L
N
G
------
A
-
G
G
S
A
D
-
L
A
K
Y
I
Q
A
G
A
T
Y
Y
F
N
----
K
N
M
-
N
V
W
V
D
Y
R
F
N
L
L
D
E
N
D
Y
S
S-----------
S
Y
V
G
T
D
D
Q
A
A
V
G
I
T
Y
Q
F
7
HHSearch
38.17
11%
19
- C3 -
3WI5
2
OMPB1_NEIMB
A:
[1-312]
-----------------------------------------------------------------
D
V
T
L
Y
G
T
I
K
A
G
V
E
T
S
R
S
V
F
H
Q
NGQVT--
E
V
T
T
A
T
G
I
V
D
L
G
S
K
I
G
F
K
G
Q
--
E
D
L
G
N
G
L
K
A
I
W
Q
V
E
Q
K
A
S
IAGT
D
S
-----
G
--
W
G
N
R
Q
S
F
I
G
L
-----
K
---------
G
G
F
G
K
L
R
V
---
G
R
L
N
S
V
L
K
-----
D
T
-
G
-
D
-
I
N
P
-
W
D
--
S
K
S
-
D
Y
L
--
G
-
V
-
N
--
K
----
I
------
A
E
-
P
E
---
A
R
L
I
S
V
R
Y
-
D
S
-
P
E
F
-----
A
G
L
S
G
-
S
V
Q
Y
A
L
N
D
-
N
A
-
G
-----------------------
R
H
N
S
E
S
Y
H
A
G
F
N
Y
K
N
------
G
G
F
F
V
Q
----
Y
G
G
A
---
Y
K
R
H
H
Q
V
---------------
Q
--------------------------------------------------
E
G
L
N
I
E
K
Y
Q
--
I
H
R
L
V
-----
S
G
Y
D
N
D
----
A
-
L
Y
A
--
S
V
A
V
-
Q
Q
Q
D
A
K
L
T
D
A----------------
S
------------------
N
-------------
S
--------------
H
---------
N
S
Q
T
E
V
A
A
T
L
A
Y
R
F
------
G
N
------------------------------
V
T
P
R
V
S
Y
A
H
G
F
K
G
L
V
A
K
--------
A
D
I
G
N
-
R
Y
D
Q
V
V
V
G
A
E
Y
D
F
S
----
K
R
T
-
S
A
L
V
S
A
G
W
L
Q
E
G
K
G
E
---------------
N
K
F
V
A
T
A
G
G
V
G
L
R
H
K
F
30
Fugue
37.11
14%
-8
- C2 -
4ECF
11
?
A:
[2-261]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
-
G
-
E
S
I
T
A
V
G
S
T
A
L
-
Q
P
L
--
V
-
E
-
A
--
A
----
G
E
---
Q
-
Y
T
-
G
E
---
H
L
G
T
F
I
N
V
-
Q
G
---------
G
G
T
G
T
G
L
S
Q
I
Q
E
G
A
-
V
Q
-
I
---------------
G
------
N
S
D
L
F
A
G
E
Q
-
K
G
I
N
A
R
Q
L
V
D
H
-
R
V
A
V
V
G
----
I
T
P
I
---
V
----
N
K
K
V
G
V
K
N
--------
L
S
T
N
Q
------
L
I
K
I
F
T
G
Q
I
T
N
W
K
E
V
G
GAD
Q
S
I
V
L
I
N
R
A
--
Q
G
S
G
------
T
R
A
T
F
E
Q
F
------
G
L
A
-----
N
H
R
S
K
T
----
A
-
Q
E
Q
--
D
S
S
G
M
V
R
S
I
V
A
T
T
-------------------------------------------------------------------------------
P
G
A
I
S
Y
V
A
F
S
Y
------
V
N
K
----
T
V
Q
A
L
---
S
L
N
H
V
A
P
T
E
V
N
V
T
T
N
-
D
W
R
I
W
S
Y
E
H
L
Y
T
K
G
H
P
T
G
L
T
K
A
F
I
T
-
Y
V
Q
S
P
-
A
I
Q
N
T
L
V
R
Q
L
G
Y
L
S
----
P
D
Q
M
L
V
E
R
D
A
N
G
H
I
T
K
T
---------------------------------
6
HHSearch
35.73
12%
32
- C3 -
2J1N
2
OMPC_ECOLI
A:
[6-346]
-------------------------------------------------------------
K
D
G
N
K
L
D
L
Y
G
K
V
D
G
L
H
Y
F
S
D
N
K
D
--------------
V
D
G
D
Q
T
Y
M
R
L
G
F
K
G
E
T
Q
V
--
T
D
Q
L
T
G
Y
G
Q
W
E
Y
Q
I
Q
GNSAEN
E
N
---
N
--
S
W
T
R
V
A
F
A
G
L
-----
K
F
--------
Q
D
V
G
S
F
D
Y
---
G
R
N
Y
G
V
V
Y
-----
D
V
T
S
-
W
-
T
D
V
L
P
E
--
F
G
G
-
D
T
Y
----
G
-
S
--
D
----
N
------
F
M
-
Q
Q
---
R
G
N
G
F
A
T
Y
-
R
N
-
T
-
D
FFGLV
D
G
L
N
F
-
A
V
Q
Y
Q
G
K
N
-
G
N
-
P
SGEGFTSGVTNNGRD
A
------
L
R
Q
N
G
D
G
V
G
G
S
I
T
Y
D
Y
------
E
G
F
G
I
G
----
G
A
I
S
---
S
S
K
R
T
D
A
---------------
Q
N
-----------------
T
-
A
A
----------------------------
Y
I
G
N
G
D
R
A
E
--
T
Y
T
G
G
-----
L
K
Y
D
A
N
----
N
-
I
Y
L
--
A
A
Q
Y
-
T
Q
T
Y
N
A
T
R
V
GS---------------
L
------------------
G
-------------
W
--------------
A
---------
N
K
A
Q
N
F
E
A
V
A
Q
Y
Q
F
------
D
F
---------------------
G
--------
L
R
P
S
L
A
Y
L
Q
S
K
G
K
N
L
G
R
G
-------
Y
D
D
E
D
-
I
L
K
Y
V
D
V
G
A
T
Y
Y
F
N
----
K
N
M
-
S
T
Y
V
D
Y
K
I
N
L
L
D
D
N
Q
F
T
R
D
----------
A
G
I
N
T
D
N
I
V
A
L
G
L
V
Y
Q
F
5
HHSearch
35.59
10%
31
- C3 -
1PHO
-
PHOE_ECOLI
A:
[6-340]
-------------------------------------------------------------
K
D
G
N
K
L
D
V
Y
G
K
V
K
A
M
H
Y
M
S
D
N
A
S
K
------------
D
G
D
Q
S
Y
I
R
F
G
F
K
G
E
T
Q
--
I
--
N
D
Q
L
T
G
Y
G
R
W
E
A
E
F
A
GNKAESDTA--
Q
--
Q
K
T
R
L
A
F
A
G
L
-----
K
Y
--------
K
D
L
G
S
F
D
Y
---
G
R
N
L
G
A
L
Y
-----
D
V
E
A
-
W
-
T
D
M
F
----
P
E
F
-
G
G
D
--
S
---
A
--
Q
----
T
----
D
-
N
F
M
T
K
---
R
A
S
G
L
A
T
Y
-
R
N
-
T
-
D
FFGVI
D
G
L
N
L
-
T
L
Q
Y
Q
G
K
N
-
E
N
-
R
D--------------
V
------
K
K
Q
N
G
D
G
F
G
T
S
L
T
Y
D
F
G
------
D
F
A
I
S
----
G
A
Y
T
---
N
S
D
R
T
N
E
---------------
Q
N
L
-----------------
Q
------------------------------
S
R
G
T
G
K
R
A
E
--
A
W
A
T
G
-----
L
K
Y
D
A
N
----
N
-
I
Y
L
--
A
T
F
Y
-
S
E
T
R
K
M
T
P
I
T----------------
G
------------------
G
-------------
F
--------------
A
---------
N
K
T
Q
N
F
E
A
V
A
Q
Y
Q
F
------
D
F
---------------------
G
--------
L
R
P
S
L
G
Y
V
L
S
K
G
K
D
I
E
G
--------
I
G
D
E
D
-
L
V
N
Y
I
D
V
G
A
T
Y
Y
F
N
----
K
N
M
-
S
A
F
V
D
Y
K
I
N
Q
L
D
S
D
N
K
-------------
L
N
I
N
N
D
D
I
V
A
V
G
M
T
Y
Q
F
14
HHSearch
32.95
15%
41
- C3 -
3T24
4
?
A:
[254-398]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
D
N
K
--
A
L
N
A
M
-----
F
T
Y
S
L
G
----
Y
-
H
A
F
--
G
V
G
Y
-
Q
K
M
S
G
D
T
G
F
A
Y
I
NGADPYLVNFIQIG
D
------------------
F
-------------
A
--------------
N
---------
K
D
E
K
S
W
Q
A
R
Y
D
Y
N
F
------
A
G
-------------------
V
---
G
I
--
P
-
G
L
T
F
M
T
R
Y
V
K
G
D
N
I
D
L
L
T
T
--------
S
G
E
G
-
K
E
W
E
R
D
M
D
I
A
Y
V
F
Q
SGPL
K
N
L
-
G
V
K
W
R
N
A
T
M
R
T
N
Y
------------------
T
N
D
Y
D
E
N
R
L
I
V
S
Y
T
L
16
HHSearch
32.43
11%
34
- C3 -
2Y0L
-
?
A:
[254-399]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
I
D
N
K
--
S
L
N
G
M
-----
F
T
Y
S
L
G
----
N
-
H
A
F
--
G
A
A
W
-
Q
R
M
N
G
D
D
A
F
P
Y
L
E
-------------
G
------------------
S
NPYLVNFVQVNDF
A
--------------
G
---------
P
K
E
R
S
W
Q
L
R
Y
D
Y
D
F
------
V
G
-----------------
L
-----
G
I
--
P
-
G
L
T
F
M
T
R
Y
V
K
G
D
N
V
E
L
A
G
--------
Q
-
G
E
G
-
R
E
W
E
R
N
T
E
L
Q
Y
V
F
Q
SGAL
K
N
L
-
G
I
R
W
R
N
A
T
F
R
S
N
F
------------------
T
R
D
I
D
E
N
R
L
I
V
S
Y
T
L
15
HHSearch
31.69
10%
42
- C3 -
2Y0H
4
?
A:
[243-388]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
D
N
R
--
N
L
N
A
M
-----
L
T
L
R
A
G
----
A
-
H
A
F
--
G
I
G
V
-
Q
K
M
I
G
N
D
A
F
-----------------
P
V
L
N
GYTTPYVANLMAYQT
F
-------------
T
--------------
R
---------
P
Q
E
K
S
W
Q
L
R
Y
D
Y
D
F
------
A
G
L
----------------------
G
L
--
P
-
G
L
N
L
M
T
R
Y
V
Q
G
R
D
I
D
R
G
A
--------
G
R
A
D
D
-
S
E
W
E
R
N
T
D
L
S
Y
V
I
Q
SGPL
K
S
V
-
A
L
K
W
R
N
I
T
Y
R
S
R
Y
G
------------------
A
D
L
D
E
N
R
F
I
V
N
Y
T
L
20
HHSearch
30.82
15%
32
- C3 -
3SZV
2
?
A:
[254-398]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
D
N
R
--
A
F
G
A
L
-----
F
S
L
R
L
G
----
A
-
H
A
V
--
A
A
G
Y
-
Q
R
I
S
G
D
D
P
Y
-----------------
P
YIA---------------
G
-------------
S
DPYLVNFIQIGDFG
N
---------
V
D
E
R
S
W
Q
L
R
Y
D
Y
D
F
------
G
A
-----------------
L
-----
G
L
--
P
-
G
L
S
F
M
S
R
Y
V
S
G
D
N
V
A
R
G
A
---------
A
N
D
G
-
K
E
W
E
R
N
T
D
L
G
Y
V
V
Q
SGPL
K
N
L
-
G
V
K
W
R
N
A
T
V
R
S
N
F
------------------
A
N
D
L
D
E
N
R
L
I
L
S
Y
S
L
13
HHSearch
30.19
10%
-4
- C3 -
3PRN
2
PORI_RHOBL
A:
[192-289]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
--
I
A
F
V
G
-----
A
A
Y
K
F
N
----
D
A
G
T
V
--
G
L
N
W
-
Y
D
N
G
L
---------------------------------------------------------------------
S
---------
T
A
G
D
Q
V
T
L
Y
G
N
Y
A
F
------
G
A
------------------------------
T
T
V
R
A
Y
V
S
D
I
D
R
A
----------------
G
-
A
D
T
A
Y
G
I
G
A
D
Y
Q
F
A
----
E
G
V
-
K
V
S
G
S
V
Q
S
G
F
A
N
----------------------
E
T
V
A
D
V
G
V
R
F
D
F