@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA3340: (2016-02-16 )
MPGKALRVMLCAWSCLLAGQASALGVGDIILHSALNQPLDADIELLDVGDLGADEIEVRLAGADVFAAAGVERLQFLNELRFSPVLQGRGGNRIHVSSIRPVQEPYLNFLVEVARPNGRIVREFTVLLDPLGYTPRMLPAARSGIEPQRQSSTPVPAPRSAAVVVDPALLEPGDEYLARPSDNLWAISGRLRGAGNADRAQLMEALYQLNPQAFVNADRHRLKAGARLRLPAGYQPERGAPGAVKEAAVEVLPPADAAVVENAPAALVEAQRQADAEAEALARQREELSQRMDDLQRQLQALQEQLQQRDHQVAELQQQLARRQAVRPAAPPPAAAAPSVAQPVETPTDSQYWRWMIVLLLVLALLGVLLLRRRREEAPVPAVEPKRRVALNLPLRRAPRPPAAAPAPAKVEEQARPPVAAPSSPPPSPPPAPAAAPRAAMAAADKLDGADIYIAYGRYGQARDLLRQVLAEQPQRLSARMKLLLVLAELGDAAGFDALAEETLASGGNPEAIDELRGRYPALLQMPATETPAATTKDDDWSDLPLAESPVLQQPDATSGADGFGDLNLDLDLDWGALENPLDNPDLPRRAAAGKAEPAEEPLAFESNLHELPDVAEYEHLELDQPEPATVPPEEASASLDRARACIDSGDLDQASRILRLVVAHGDPWQKAEARELLALIA

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......-----260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470....---.---..480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MPGKALRVMLCAWSCLLAGQASALGVGDIILHSALNQPLDADIELLDVGDLGADEIEVRLAGADVFAAAGVERLQFLNELRFSPVLQGRGGNRIHVSSIRPVQEPYLNFLVEVARPNGRIVREFTVLLDPLGYTPRMLPAARSGIEPQRQSSTPVPAPRSAAVVVDPALLEPGDEYLARPSDNLWAISGRLRGAGNADRAQLMEALYQLNPQAFVNADRHRLKAGARLRLPAGYQPERGAPGAVKEAAVEVLPPADAAV-----VENAPAALVEAQRQADAEAEALARQREELSQRMDDLQRQLQALQEQLQQRDHQVAELQQQLARRQAVRPAAPPPAAAAPSVAQPVETPTDSQYWRWMIVLLLVLALLGVLLLRRRREEAPVPAVEPKRRVALNLPLRRAPRPPAAAPAPAKVEEQARPPVAAPSSPPPSPPPAPAAAPRAAMAAADKLDGADIYIAYGRYGQARDLLRQVLAEQPQR---L---SARMKLLLVLAELGDAAGFDALAEETLASGGNPEAIDELRGRYPALLQMPATETPAATTKDDDWSDLPLAESPVLQQPDATSGADGFGDLNLDLDLDWGALENPLDNPDLPRRAAAGKAEPAEEPLAFESNLHELPDVAEYEHLELDQPEPATVPPEEASASLDRARACIDSGDLDQASRILRLVVAHGDPWQKAEARELLALIA
1 PsiBlast_PDB 81.2253% 33 - C1 -4MAL - ? A:[16-64] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERLA
40 Fugue 78.4753% 47 - C1 -4MBQ - ? A:[16-64] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERLA
2 PsiBlast_PDB 78.4753% 47 - C1 -4MBQ - ? A:[16-64] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERLA
26 HHSearch 70.7515% 7 - C1 -2YHC BAMD_ECOLI A:[151-212] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YSVAEYYTERGAWVAVVNRVEGMLRDYPDT---QATRDALPLMENAYRQMQMNAQAEKVAKIIAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 HHSearch 70.3024% 9 - C1 -3AS5 ? A:[81-129] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLGLTYVQVQKYDLAVPLLIKVAEANPIN---F---NVRFRLGVALDNLGRFDEA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 69.5018% 14 - C1 -2FF4 - EMBR_MYCTU A:[178-232] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEAEIACGRASAVIAELEALTFEHPYR---E---PLWTQLITAYYLSDRQSDALGAYRRVK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 HHSearch 68.9019% 40 - C1 -2XEV ? A:[7-57] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVAFDALKNGKYDDASQLFLSFLELYPNGVYTP---NALYWLGESYYATRNFQL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 67.7328% 42 - C1 -2PL2 - ? A:[31-83] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPLRLGVQLYALGRYDAALTLFERALKENPQD---P---EALYWLARTQLKLGLVNPAL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37 HHSearch 66.4914% 23 - C1 -1XNF - NLPI_ECOLI A:[82-137] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YLGIYLTQAGNFDAAYEAFDSVLELDPTY---N---YAHLNRGIALYYGGRDKLAQDDLLAF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 65.1422% 26 - C1 -1ZBP - ? A:[3-56] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QWKNALSEGQLQQALELLIEAIKASPKD---A---SLRSSFIELLCIDGDFERADEQLMQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31 HHSearch 65.0815% 18 - C1 -2XCB ? A:[57-110] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLGACRQSLGLYEQALQSYSYGALMDINE---P---RFPFHAAECHLQLGDLDGAESGFY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 Fugue 64.8021% 107 - C1 -3QH9 A:[14-79] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEE-----KQRKAEELLQELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVALKDAEIERLHSQLSR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 HHSearch 64.1518% 61 - C1 -1HXI ? A:[19-68] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPMEEGLSMLKLANLAEAALAFEAVCQKEPER---E---EAWRSLGLTQAENEKDG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 HHSearch 63.7919% 8 - C1 -1NA3 ? A:[14-66] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLGNAYYKQGDYDEAIEYYQKALELDPNN---A---EAWYNLGNAYYKQGDYDEAIEYY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 HHSearch 61.3216% 32 - C1 -2XEV ? A:[44-102] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WLGESYYATRNFQLAEAQFRDLVSRYPTH---DKAAGGLLKLGLSQYGEGKNTEAQQTLQQV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 61.2425% 124 - C1 -3Q8T - BECN1_RAT A:[199-261] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 Fugue 60.7217% 101 - C1 -2W83 JIP4_HUMAN C:[1-67] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMDPEF-----MGREVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_CBE 59.3132% 149 - C1 -3GP4 ? B:[70-125] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEEL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 58.8432% 150 - C1 -3GP4 ? A:[70-125] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEEL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 57.2121% 64 - C1 -2YR0 - ? A:[127-237] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLG--LKPRTREVARWREERTPREALEALSERLYSFTQGLPEPVHARVMERLWAW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------