@TOME V2.3
(Nov 2016)

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA4661: (2016-02-29 )
MKKLLPLAVLAALSSVHVASAQAADVSAAVGATGQSGMTYRLGLSWDWDKSWWQTSTGRLTGYWDAGYTYWEGGDEGAGKHSLSFAPVFVYEFAGDSIKPFIEAGIGVAAFSGTRVGDQNLGSSLNFEDRIGAGLKFANGQSVGVRAIHYSNAGLKQPNDGIESYSLFYKIPI

Atome Classification :

(20 SA) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........----10........20........30...-----.....40........-50....------....60---.......-.70-..--..-----....80.......---.-90...-.--.-...100..---.....110..-..-.---------..120......-.130....----...140.....-..150...------------..----..160.......170.------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKLLPLAV----LAALSSVHVASAQAADVSAAVGATG-----QSGMTYRLGLSWDWD-KSWWQT------STGRLT---GYWDAGY-TYW-EG--GD-----EGAGKHSLSFAPV---F-VYEFA-G--D-SIKPFIEA---GIGVAAFSGT-RV-G---------DQNLGSSLNFE-DRIGAGLK----FANGQSVGVRA-IHYSNAGL------------KQ----PNDGIESYSLFYKIPI------------------------------------------------------------------------------------------------
50 Fugue 90.94100% -28 - C2 -2ERV PAGL_PSEAE A:[1-150] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADVSAAVGATG-----QSGMTYRLGLSWDWD-KSWWQT------STGRLT---GYWDAGY-TYW-EG--GD-----EGAGKHSLSFAPV---F-VYEFA-G--D-SIKPFIEA---GIGVAAFSGT-RV-G---------DQNLGSSLNFE-DRIGAGLK----FANGQSVGVRA-IHYSNAGL------------KQ----PNDGIESYSLFYKIPI------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 90.94100% -28 - C2 -2ERV PAGL_PSEAE A:[1-150] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADVSAAVGATG-----QSGMTYRLGLSWDWD-KSWWQT------STGRLT---GYWDAGY-TYW-EG--GD-----EGAGKHSLSFAPV---F-VYEFA-G--D-SIKPFIEA---GIGVAAFSGT-RV-G---------DQNLGSSLNFE-DRIGAGLK----FANGQSVGVRA-IHYSNAGL------------KQ----PNDGIESYSLFYKIPI------------------------------------------------------------------------------------------------
60 HHSearch 90.52100% -27 - C2 -2ERV PAGL_PSEAE A:[2-150] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVSAAVGATG-----QSGMTYRLGLSWDWD-KSWWQT------STGRLT---GYWDAGY-TYW-EG--GD-----EGAGKHSLSFAPV---F-VYEFA-G--D-SIKPFIEA---GIGVAAFSGT-RV-G---------DQNLGSSLNFE-DRIGAGLK----FANGQSVGVRA-IHYSNAGL------------KQ----PNDGIESYSLFYKIPI------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 90.30100% -36 - C2 -2ERV PAGL_PSEAE B:[1-150] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADVSAAVGATG-----QSGMTYRLGLSWDWD-KSWWQT------STGRLT---GYWDAGY-TYW-EG-----------AGKHSLSFAPV---F-VYEFA-G--D-SIKPFIEA---GIGVAAFSGT-RV-G---------DQNLGSSLNFE-DRIGAGLK----FANGQSVGVRA-IHYSNAGL------------KQ----PNDGIESYSLFYKIPI------------------------------------------------------------------------------------------------
54 Fugue 55.9318% -66 - C1 -1AOC COAG_TACTR A:[1-175] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADTNAPICLCDEPGVLGRTQIVTTEIKDKIEKAVEAVA-----QESGVSGRGFSIFSH-HPVFRECGKYECRTVRPE---HSRCYNF-PPF-TH--FK-----SECPVSTRDCEPV---F-GYTVA-G--E--FRVIVQAPRAGFRQCVWQHKCRF-G---------SNSCGYNGRC----------------TQQRSVVRL-VTYN---L------------EK----DGFLCESFRTCCGCPCRSF---------------------------------------------------------------------------------------------
59 Fugue 52.7417% -23 - C2 -2F1C OMPG_ECOLI X:[4-283] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDWHFNIGAMYEIENVGLAEPSVYF----NAANGPWRIALAYYQEGPVDYSKRG-----TWFDRPELEVHYQFL-END-DF------SFGLTG---GFRNYGY-HYVDEP--GK-----DTANMQRWKIAPD---W-DVKLT-D--D----LRFNG---WLSMYKFAN---------------DLNTTGYADTR-VETETGLQ----YTFNETVALRV-NYYLERGFNMDD--------SR----NNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSNDFNRVGLFYGYDFQNGLSVSLEYAFEWQDDKFHYAGVGVNYSFHHH------------------------------
51 Fugue 50.2721% -37 - C2 -1ZPS HIS3_METTH A:[8-131] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VNILLNFRH----NINGEDLIIAVAQDHE-------TG-----EVLMVAYMN-----R-EALRRT------LETGTA---HYWSTSRGKLW-LK--GE-----SS--GHVQRVKDV---L-V-DCD-G--D-AVVLKVEQ----EGGACHTGY-R-------------------------------------------SCFY-RSIDGDEL------------KV----REDAVKVFDP------------------------------------------------------------------------------------------------------
53 Fugue 48.5820% -31 * C1 *4RWR - ? A:[55-323] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTDQVYKSKEELKKQWG--------------NNYENNLKKIEEAVSKTA-----GQVLTYE---GKPIS-ASFFST------SNGRTENAADYWGNDY-PYL-KS--VD-----SPWDQASPKFTSE---Q-IFT----------VADFQK---RLGVKVLADG-KV-G---------DIKGRTEGKRV-KDVAFQGK----TLTGRDVRDKLELRSSDFTW------------KQ----EGDKIVVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYYKGVEIKTMNDY------------------------------------------------------------
55 Fugue 41.0419% -23 - C2 -4K3C - ? A:[1-532] YNISEMRIIGDTQKLDNELNQLLTHFKAGQLFRKTELSIIEEQIKQILGDRGYGSAKVDLYPKFNEEDHTVQINFIVDAGRRIYVRKIRFEGNDVTADSTLRREMRQQEGAWLSTSAVSLAKSRLERTGFYETVEMSMPTVKNTDDQVDIIYKIKERNTGSINFGVGYGSGSGLSYNAGITQDNFLGMGSSLGLNGSRNTDSTNVNLSYTEPYFTKDGVSLGGNIFYEDYDNSARKASAAYKRKTYGASGTLGFPVDENNSYYLGLGYTHDKLRNVEREYTREKYVNSMKF----PINPQNSHYDRIQSADFDLSFGWNY-----NN-----LNRGYFPT-AGSSAN------ISGKLT-------------L-PG--SD-----NKYYQVGTNFSGY---I-PLNSE-H--K-WVIATKGG---LAYTNSFGGK-EV-P---------FYQLYSAGGMG-SLRG--------FAGG-SIGPKA-IYYREDGF------------KA----PSQDVIGGNAMVNASLELIIPAPFISDKYQHNVRTSVFVDAATVWNTKWKQSKADYPNLPDFGDYKRVRASAGIALQWQSPIGPLSFSYAKPIKKYAGDEIEQFQFTVGSTF
62 HHSearch 40.3712% -25 - C2 -1ORM - OMPX_ECOLI A:[3-148] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STVTGGYAQSDAQGQMNKMGGFNLKYRYEEDNSPLGVI-------------------GSF-TYT-EK--SRTASSGDYNKNQYYGITAG---P-AYRIN----D-WASIYGVV---GVGYGKFQTT-EYPT---------YKNDTSDYGFS-YGAGLQFN----PMENVALDFSY-EQSRIR---------------------SVDVGTWIAGVGYRF------------------------------------------------------------------------------------------------
66 HHSearch 39.3510% -20 - C2 -2JMM - OMPA_ECOLI A:[22-150] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NQLGAGAFGGYQVN-PYVG-------------------FEMGY-DWL-GR--MP-----R--KAQGVQLTAK---L-GYPKLGT--D-DLDIYTRL---GGMVWRADTS-DK-DGNGY-----ISAAEASVSPV-FAGGVEYVIRRRITPEIATRLEY-QWTNNA----------------------SDNGMLSLGVSYRF------------------------------------------------------------------------------------------------
27 PsiBlast_CBE 39.2633% -31 - C5 -4L17 ? G:[62-121] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GARDADT-KIW-NGMVGE-----LVYGKADIAIAPLTITY-VREEV-I--D-FSKPFMSL---GISIMIKKGT-PI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
82 HHSearch 38.9214% -31 - C2 -2J1N OMPC_ECOLI A:[299-346] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVGATYY----FNKNMSTYVDY-KINLLDDN------------QFTRDAGINTDNIVALGLVYQF------------------------------------------------------------------------------------------------
56 Fugue 38.7812% -19 * C3 *3LGD CECR1_HUMAN A:[3-484] ---------------------------------------------------SIDETRAHLLLKEKMMRLGGRLVLNTKEELANERLMTLKIAEMKEAMRTLIFPPSMHFFQAKHLIERSQVFNILRMMPKGAALHLHDIGIVTMDWLVRNVTYRPHCHICFTPRGIMQFRFAHPTPRPSEKCSKWILLEDYRKRVQNVTEFDDSLLRNFTLVTQHPEVIYTNQNVVWSKFETIFFTISGLIHYAPVFRDYVFRSMQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKT----YQEVAQKFVETHPEFIGIKIIYSDH-----RSKDVAVIAESIRMA-MGLRIK------FPTVVA---G--------FD-LV--GH-----EDTGHSLHDYKEA---LMIPAKD-G--V-KLPYFFHA---GETDWQGTSI--------------DRNILDALMLNTTRIGHGFA----LSKH---------PAVRTYS------------WK----KDIPIEVCPISNQVLKLVSDLRNHPVATLMATGHPMVISSDDPAMFGAKGLSYDFYEVFMGIGGMKADLRTLKQLAMNSIKYSTLLESEKNTFMEIWKKRWDKFIADVAT--
71 HHSearch 38.4318% -33 * C2 *2F1V OMPW_ECOLI A:[76-157] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VHHLPPTLM---A-QWYFG-DASS-KFRPYVGA---GINYTTFFDN-GF-NDHGKEAGLSDLSLKDSWGAA-GQVGVDYL----INRDWLVNMSV-WYM---------------------------------------------------------------------------------------------------------------------------------------
41 PsiBlast_CBE 38.0233% -30 - C5 -4N07 GRIA2_RAT C:[62-121] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GARDADT-KIW-NGMVGE-----LVYGKADIAIAPLTITY-VREEV-I--D-FSKPFMSL---GISIMIKKGT-PI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 PsiBlast_CBE 37.6633% -39 - C5 -4IY6 ? A:[62-121] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GARDADT-KIW-NGMVGE-----LVYGKADIAIAPLTITY-VREEV-I--D-FSKPFMSL---GISIMIKKGT-PI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
67 HHSearch 37.5510% -20 - C2 -2LHF - ? A:[74-179] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QNLLGS---Y-DAFLP-IG-DNNTKLFGGA---TLGLVKLEQD-GK-GF--------KRDSDVGYAAG-LQAGILQE----LSKNASIEGGY-RYLRTNASTEMTPHGGNKLGSL----DLHSSSQFYLGANYKF------------------------------------------------------------------------------------------------
49 PsiBlast_CBE 37.5533% -38 - C5 -3TDJ GRIA2_RAT A:[62-121] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GARDADT-KIW-NGMVGE-----LVYGKADIAIAPLTITY-VREEV-I--D-FSKPFMSL---GISIMIKKGT-PI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
46 PsiBlast_CBE 37.4433% -37 - C5 -4IY5 GRIA2_RAT A:[62-121] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GARDADT-KIW-NGMVGE-----LVYGKADIAIAPLTITY-VREEV-I--D-FSKPFMSL---GISIMIKKGT-PI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------