@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA4909: (2016-03-02 )
MSAALLEFREVDVFYGPIQALKKVSLQVNEGETVSLIGANGAGKSTLLMSIFGQPRAAAGQILYRGQDIRQKSAHYVASNGIAQSPEGRRVFPDMSVEENLLMGTIPIGMDHAEEDMQRMFELFPRLKERRNQRAMTMSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPIVVKQIFQTLRELARSGMTIFLVEQNANHALKLSDRAYVMVTGEIRMSGSGEELLGNQEVRNAYLGGH

Atome Classification :

(20 SA) .........10....-.-...20..-......30........40........50..-----......60........70.-----..-.....80........90........100......-..------------110-------------.----........120.--..--..-------.--.130.......140.......150..-.....160.......170.......180...-.-...190.......200.......210-.......220.----..----....230......--------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSAALLEFREVDVFY-G-PIQALKK-VSLQVNEGETVSLIGANGAGKSTLLMSIFG-----QPRAAAGQILYRGQDIRQK-----SA-HYVASNGIAQSPEGRRVFPDMSVEENL-LMGTIP-IG------------M---------------D----HAEEDMQRMFEL--FP--RL-------K--ERRNQRAMTMSGGEQQMLAIARALMS-RPKLLLLDEPSLGLAPIVVKQIFQTLRELAR-S-GMTIFLVEQNANHALKLSDRAYVMVT-GEIRMSGSGEE----LL----GNQEVRNAYLGGH--------------------------------------------------------------------------------------------------------------
58 HHSearch 95.4453%-107 - C1 -1JI0 ? A:[3-238] -SDIVLEVQSLHVYY-G-AIHAIKG-IDLKVPRGQIVTLIGANGAGKTTTLSAIAG-----LVRAQKGKIIFNGQDITNK-----PA-HVINRMGIALVPEGRRIFPELTVYENL-MMGAYN-RK------------DK--------------E----GIKRDLEWIFSL--FP--RL-------K--ERLKQLGGTLSGGEQQMLAIGRALMS-RPKLLMMDEPSLGLAPILVSEVFEVIQKINQ-E-GTTILLVEQNALGALKVAHYGYVLET-GQIVLEGKASE----LL----DNEMVRKAYLG----------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 94.4451%-105 - C1 -1JI0 ? A:[2-238] VSDIVLEVQSLHVYY-G-AIHAIKG-IDLKVPRGQIVTLIGANGAGKTTTLSAIAG-----LVRAQKGKIIFNGQDITNK-----PA-HVINRMGIALVPEGRRIFPELTVYENL-MMGAYNRKD------------K---------------E----GIKRDLEWIFSL--FP--RL-------K--ERLKQLGGTLSGGEQQMLAIGRALMS-RPKLLMMDEPSLGLAPILVSEVFEVIQKINQ-E-GTTILLVEQNALGALKVAHYGYVLET-GQIVLEGKASE----LL----DNEMVRKAYLG----------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 73.5435% -96 - C1 -4QC2 ? B:[13-236] --------------Y-K-GRRVVED-VSLTVNSGEIVGLLGPNGAGKTTTFYMVVG-----IVPRDAGNIIIDDDDISLL-----PL-HARARRGIGYLPQEASIFRRLSVYDNL--MAVLQ-IR------------D---------------DL---SAEQREDRANEL--MEEFHI-------E--HLRDSMGQSLSGGERRRVEIARALAA-NPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ-GHLIAHGTPTE----IL----QDEHVKRVYLG----------------------------------------------------------------------------------------------------------------
74 Fugue 73.3427% -86 - C1 -1Z47 ? A:[11-355] -GSMTIEFVGVEKIYPG-GARSVRG-VSFQIREGEMVGLLGPSGSGKTTILRLIAG-----LERPTKGDVWIGGKRVTDL-----P----PQKRNVGLVFQNYALFQHMTVYDNV-SFGLRE-KRVP----------K---------------D----EMDARVRELLRF--M---RL-------E--SYANRFPHELSGGQQQRVALARALAP-RPQVLLFDEPFAAIDTQIRRELRTFVRQVHD-EMGVTSVFVTHDQEEALEVADRVLVLHE-GNVEQFGTPEE----VY----EK--PGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR
23 PsiBlast_CBE 73.3433% -97 - C1 -4WBS ? B:[36-279] -TSSSLVVRNLKKRY-G-SRTVVKD-VSLDVKSGEVVGLLGPNGAGKTTSFYMIVG-----LVPLDAGEIDLDGKSISLL-----PI-HKRASLGLSYLPQEASVFRKLSVEENIRAVLELQ-VG-----------------------------GKRLSKDAIASRTEAL--LD--EL-------QISHLRENPALSLSGGERRRVEIARALAT-NPSFILLDEPFAGVDPIAVLEIQKIVKFLKQ-R-NIGVLITDHNVRETLGICDHAYIISD-GSVLAAGAPGD----II----ENESVRRVYLGEH--------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 73.2433% -95 - C1 -4WBS ? A:[37-279] --SSSLVVRNLKKRY-G-SRTVVKD-VSLDVKSGEVVGLLGPNGAGKTTSFYMIVG-----LVPLDAGEIDLDGKSISLL-----PI-HKRASLGLSYLPQEASVFRKLSVEENIRAVLELQ-VG------------D---------------DGKRLSKDAIASRTEAL--LD--EL-------QISHLRENPALSLSGGERRRVEIARALAT-NPSFILLDEPFAGVDPIAVLEIQKIVKFLKQ-R-NIGVLITDHNVRETLGICDHAYIISD-GSVLAAGAPGD----II----ENESVRRVYLGEH--------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 72.7832%-101 - C1 -1G6H LIVG_METJA A:[16-256] -------------YF-G-EFKALDG-VSISVNKGDVTLIIGPNGSGKSTLINVITG-----FLKADEGRVYFENKDITNK-----EP-AELYHYGIVRTFQTPQPLKEMTVLENL-LIGEIC-PGESPLNSLFYKKWI---------------P----KEEEMVEKAFKILEFL--KL-------S--HLYDRKAGELSGGQMKLVEIGRALMT-NPKMIVMDEPIAGVAPGLAHDIFNHVLELKA-K-GITFLIIEHRLDIVLNYIDHLYVMFN-GQIIAEGRGEEEIKNVL----SDPKVVEIYIG----------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 72.3935% -92 - C1 -4QC2 ? A:[13-236] --------------Y-K-GRRVVED-VSLTVNSGEIVGLLGPNGAGKTTTFYMVVG-----IVPRDAGNIIIDDDDISLL-----PL-HARARRGIGYLPQEASIFRRLSVYDNL--MAVLQ-IR------------D---------------DL---SAEQREDRANEL--MEEFHI-------E--HLRDSMGQSLSGGERRRVEIARALAA-NPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ-GHLIAHGTPTE----IL----QDEHVKRVYLG----------------------------------------------------------------------------------------------------------------
26 PsiBlast_CBE 71.2834% -91 - C1 -4P33 LPTB_ECOLI B:[12-235] --------------Y-K-GRRVVED-VSLTVNSGEIVGLLGPNGAGKTTTFYMVVG-----IVPRDAGNIIIDDDDISLL-----PL-HARARRGIGYLPQEASIFRRLSVYDNL--MAVLQ-IR------------D---------------DL---SAEQREDRANEL--MEEFHI-------E--HLRDSMGQSLSGGERRRVEIARALAA-NPKFILLDQPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ-GHLIAHGTPTE----IL----QDEHVKRVYLG----------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 71.0835% -89 - C1 -4P32 LPTB_ECOLI A:[12-234] --------------Y-K-GRRVVED-VSLTVNSGEIVGLLGPNGAGKTTTFYMVVG-----IVPRDAGNIIIDDDDISLL-----PL-HARARRGIGYLPQEASIFRRLSVYDNL--MAVLQ-IR------------D---------------DL---SAEQREDRANEL--MEEFHI-------E--HLRDSMGQSLSGGERRRVEIARALAA-NPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ-GHLIAHGTPTE----IL----QDEHVKRVYL-----------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 71.0135% -93 - C1 -4P32 LPTB_ECOLI B:[12-230] --------------Y-K-GRRVVED-VSLTVNSGEIVGLLGPNGAGKTTTFYMVVG-----IVPRDAGNIIIDDDDISLL-----PL-HARARRGIGYLPQEASIFRRLSVYDNL--MAVLQ-IR------------D---------------DL---SAEQREDRANEL--MEEFHI-------E--HLRDSMGQSLSGGERRRVEIARALAA-NPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ-GHLIAHGTPTE----IL----QDEHVK---------------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 70.8332% -99 - C1 -1G9X LIVG_METJA B:[16-256] -------------YF-G-EFKALDG-VSISVCKGDVTLIIGPNGSGKSTLINVITG-----FLKADEGRVYFENKDITNK-----EP-AELYHYGIVRTFQTPQPLKEMTVLENL-LIGEIN-PGESPLNSLFYKKWI---------------P----KEEEMVEKAFKILEFL--KL-------S--HLYDRKAGELSGGQMKLVEIGRALMT-NPKMIVMDEPIAGVAPGLAHDIFNHVLELKA-K-GITFLIIEHRLDIVLNYIDHLYVMFN-GQIIAEGRGEEEIKNVL----SDPKVVEIYIG----------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 70.8132% -92 - C1 -1GAJ LIVG_METJA A:[16-256] -------------YF-G-EFKALDG-VSISVNKGDVTLIIGPNGSGKSTLINVITG-----FLKADEGRVYFENKDITNK-----EP-AELYHYGIVRTFQTPQPLKEMTVLENL-LIGEIN-PGESPLNSLFYKKWI---------------P----KEEEMVEKAFKILEFL--KL-------S--HLYDRKAGELSGGQMKLVEIGRALMT-NPKMIVMDQPIAGVAPGLAHDIFNHVLELKA-K-GITFLIIEHRLDIVLNYIDHLYVMFN-GQIIAEGRGEEEIKNVL----SDPKVVEIYIG----------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 70.6634% -90 - C1 -4P33 LPTB_ECOLI A:[12-235] --------------Y-K-GRRVVED-VSLTVNSGEIVGLLGPNGAGKTTTFYMVVG-----IVPRDAGNIIIDDDDISLL-----PL-HARARRGIGYLPQEASIFRRLSVYDNL--MAVLQ-IR------------D---------------DL---SAEQREDRANEL--MEEFHI-------E--HLRDSMGQSLSGGERRRVEIARALAA-NPKFILLDQPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ-GHLIAHGTPTE----IL----QDEHVKRVYLG----------------------------------------------------------------------------------------------------------------
68 HHSearch 70.4733% -97 - C1 -1G6H LIVG_METJA A:[4-243] -TMEILRTENIVKYF-G-EFKALDG-VSISVNKGDVTLIIGPNGSGKSTLINVITG-----FLKADEGRVYFENKDITNK-----EP-AELYHYGIVRTFQTPQPLKEMTVLENL-LIGEIC-PG------------ESPLNSLFYKKWIPKEE----EMVEKAFKILEF--L---KL-------S--HLYDRKAGELSGGQMKLVEIGRALMT-NPKMIVMDEPIAGVAPGLAHDIFNHVLELKA-K-GITFLIIEHRLDIVLNYIDHLYVMFN-GQIIAEGRGEE----EI----KN-------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 70.3632% -93 - C1 -1G9X LIVG_METJA A:[16-256] -------------YF-G-EFKALDG-VSISVCKGDVTLIIGPNGSGKSTLINVITG-----FLKADEGRVYFENKDITNK-----EP-AELYHYGIVRTFQTPQPLKEMTVLENL-LIGEIN-PGESPLNSLFYKKWI---------------P----KEEEMVEKAFKILEFL--KL-------S--HLYDRKAGELSGGQMKLVEIGRALMT-NPKMIVMDEPIAGVAPGLAHDIFNHVLELKA-K-GITFLIIEHRLDIVLNYIDHLYVMFN-GQIIAEGRGEEEIKNVL----SDPKVVEIYIG----------------------------------------------------------------------------------------------------------------
70 Fugue 68.2433%-109 - C1 -1G6H LIVG_METJA A:[4-257] -TMEILRTENIVKYF-G-EFKALD-GVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKAD-----EGRVYFEN----KDITNKEPA-ELYHYG-IVRTFQTPQPLKEMTVLENL-LIGEIC-PG------------ESPLNSLFYKKWI---P----KEEEMVEKAFKI--LE--FLKLSHLYD-------RKAGELSGGQMKLVEIGRALMTN-PKMIVMDEPIAGVAPGLAHDIFNHVLELKA-K-GITFLIIEHRLDIVLNYIDHLYVMF-NGQIIAEGRGEE----EIKNVLSDPKVVEIYIGE---------------------------------------------------------------------------------------------------------------
49 HHSearch 68.0427% -84 - C1 -1Z47 ? A:[13-238] ---MTIEFVGVEKIY-PGGARSVRG-VSFQIREGEMVGLLGPSGSGKTTILRLIAG-----LERPTKGDVWIGGKRVTDL-----PP----QKRNVGLVFQNYALFQHMTVYDNV-SFGLRE-KR------------VPK-------------D----EMDARVRELLRF--MR---L-------E--SYANRFPHELSGGQQQRVALARALAP-RPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEM-GVTSVFVTHDQEEALEVADRVLVLHE-GNVEQFGTPEE----VY----EKPG-----------------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 67.6632% -85 - C1 -1G9X LIVG_METJA C:[16-256] -------------YF-G-EFKALDG-VSISVCKGDVTLIIGPNGSGKSTLINVITG-----FLKADEGRVYFENKDITNK-----EP-AELYHYGIVRTFQTPQPLKEMTVLENL-LIGEIN-PGESPLNSLFYKKWI---------------P----KEEEMVEKAFKILEFL--KL-------S--HLYDRKAGELSGGQMKLVEIGRALMT-NPKMIVMDEPIAGVAPGLAHDIFNHVLELKA-K-GITFLIIEHRLDIVLNYIDHLYVMFN-GQIIAEGRGEEEIKNVL----SDPKVVEIYIG----------------------------------------------------------------------------------------------------------------
64 HHSearch 65.4627% -93 - C1 -2OLJ ? A:[22-252] --LQMIDVHQLKKSF-G-SLEVLKG-INVHIREGEVVVVIGPSGSGKSTFLRCLNL-----LEDFDEGEIIIDGINLKAK-----DTNLNKVREEVGMVFQRFNLFPHMTVLNNI-TLAPMK-VR------------KWPR------------E----KAEAKAMELLDK--VG---L-------K--DKAHAYPDSLSGGQAQRVAIARALAM-EPKIMLFDEPTSALDPEMVGEVLSVMKQLAN-E-GMTMVVVTHEMGFAREVGDRVLFMDG-GYIIEEGKPED----LF----DRPQH----------------------------------------------------------------------------------------------------------------------