@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA5353: (2016-03-06 )
MQTNLCDSARQRAEAAEAERILRSCVHCGFCNATCPTYQELGDELDGPRGRIYLIKQFLERDEASERTRLHLDRCLSCRNCETTCPSGVEYHKLLDIGRDLLAERLPRGFRQRLLRDGLRLLAPRPGLFGALAGAAGRLRPLLPEAMQGKLPRRVAAPGRRPQPRHARRVLLLEGCVQPALSPNTNAAAARVLDRLGISVTPAAAAGCCGALDFHLDAQERGRQRARRNIDAWWPLLREGAEAIVQTASGCGAFVKDYAYLLRDDPRYADKAREVAAAARDLVEVLRDEPLESLGLRCDQRLAFHCPCTLQHAQRLGGAVEAVLRRLGFHLTEVADGHLCCGSAGTYSLTQPALSQRLRDNRLDALESGAPDVIVTANVGCQAHLDGAGRTPVRHWIELLDQALPGGE

Atome Classification :

(20 SA) -------------------------------------------------------------------------------------.........10........20........30........40.......-------.50........60..-------.--------.-....70------.........80...-.....90........100.......110.----------......120.......130.......140.......150.....----------------------..160.......170.......180.........190....-----------...200.......210.......220.......230-----........240.......250.......260.......270-........280.....--..290....--...300..---------.....310.......320.......330......-----.340.......350.......360-..--------......370.......380.......390.......400......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------MQTNLCDSARQRAEAAEAERILRSCVHCGFCNATCPTYQELGDELDGP-------RGRIYLIKQFLERDE-------A--------S-ERTRL-------HLDRCLSCRNCETT-CPSGVEYHKLLDIGRDLLAERLPRGFRQR----------LLRDGLRLLAPRPGLFGALAGAAGRLRPLLPEAMQGKLPRRVAA----------------------PGRRPQPRHARRVLLLEGCVQPA--LSPNTNAAAARVLDRL-----------GISVTPAAAAGCCGALDFHLDAQERGRQRARRNID------AWWPLLREGAEAIVQTASGCGAFVKDYAYLLRDDPRYADK--AREVAAAARDLVEVLR--DEPLESLGL--RCDQRLAF---------HCPCTLQHAQRLGGAVEAVLRRLGFHLTEVADGH-----LCCGSAGTYSLTQPALSQRLRDN--RL--------DALESGAPDVIVTANVGCQAHLDGAGRTPVRHWIELLDQALPGGE
54 Fugue 78.2416% -28 - C3 -4CZB NAH1_METJA A:[1-415] -----------------------------------------------------------------------------------MELMMAIGYLGLALVLGSLVAKIAEK-----LKIPDIPLLLLLGLII-GP-------FLQIIPSDSAMEIFE-------Y--------A-GPIGL-------IFILLGGAFTMRISLLKRVIKTVVRLDT-ITFLITLLISGFIFN----------MVL-NLPYTSPVGYLFGAITAATDP-ATLIPVFSRVRTNPEVAI----------------------TLEAESIFNDPLGIVSTSVILGLFGLFSSSNPLIDLITLAG-----------GAIVVGLLLAKIYEKIIIHCDFHEYVAPLVLGGAM------LLLYVGDDLLPSICGYGFSGYMAVAIMGLYLGDALFRADDIDYKYIVSFCDDLSLLAR--VFIFVFLGACIKLSMLENY---------FIPGLLVALGSIF-----LARPLGVFLGLIGSKHSFKEKLYFALEGPRGVVPAALAVTVGIE--ILKNADKIPASITKYITPTDIAGTIIIGTFMTILLSVILEASWAGMLALKLLGE-
58 Fugue 76.5517% -40 - C1 -1EHK COX1_THET8 A:[14-562] AYPEKKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLLPFVQSYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPNMGLMWLSWWMAFIGLVVAALPLLANEATVLYTFYPPLKGHWAFY-------LGASVFVLSTWVSIY-------I--------V-LDLWR-------RWKAANPGKVTPLV-TYMAVVFWLMWFLASLGLVLEAVLFLLPWSFGLVEGVDPLVARTLFWWTGHPIVYFWLLPAYAIIYTILPKQAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADPGIDPTWKMIHSVLTLFVAVPSL--MTAFTVAASLEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYW-LLPNLTGKPISDAQ--RRLGLAVVWLWFLGMMIMAVGLHWAGL--LNVPRRAYIAQVPDAYPHAAVPMVFNVLAGIVLLVALLLFIYGLFSVLLSR-----LAEAPLPFAEVISGPEDRRLVLAMDRI--------GFWFAVAAILVVLAYGPTLVQLFG-HLNPVPGWRLW---------
2 PsiBlast_PDB 64.0524% -72 - C2 -2WP9 SDHB_ECOLI B:[135-236] -----------------------------------------------------------------------------------------------QMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGP-------AGLLAAYRFLIDSRD-------T--------E-TDSRLDGLSDAFSVFRCTSIMNCVSV-CPKGLNPTRAIGHIKSMLLQR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 61.5430% -36 - C2 -3AE6 SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 61.3030% -36 - C2 -3AE3 SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 61.2030% -33 - C2 -3AE8 SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 61.1730% -44 - C2 -3ABV SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 61.1426% -63 - C2 -2H88 SDHB_CHICK B:[144-245] -----------------------------------------------------------------------------------------------QSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGP-------AVLMQAYRWMID-SRDDYTEERL--------AQLQDPF-------SLYRCHTIMNCTRT-CPKGLNPGKAIAEIKKMMATY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 61.0030% -37 - C2 -3AE1 SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 60.7730% -36 - C2 -3AEG SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 60.7330% -49 - C2 -3AE9 SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 60.7030% -29 - C2 -3AED SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 60.6630% -34 - C2 -3AEE SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 60.6230% -34 - C2 -3AE5 SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 60.4830% -36 - C2 -3AE4 SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 60.2430% -33 - C2 -3AEF SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 60.2230% -34 - C2 -1ZOY SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 60.2230% -32 - C2 -3AEC SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 60.1830% -29 - C2 -3AE7 SDHB_PIG B:[144-243] -----------------------------------------------------------------------------------------------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERL-------A--------K-LQDPF-------SLYRCHTIMNCTGT-CPKGLNPGKAIAEIKKMMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 HHSearch 59.6824% -67 - C2 -2WDQ SDHB_ECOLI B:[135-235] -----------------------------------------------------------------------------------------------QMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGP-------AGLLAAYRFLID-SR-------DTETDSRLDG-LSDAF-------SVFRCHSIMNCVSV-CPKGLNPTRAIGHIKSMLLQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------