Study : jhp_1371 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C4_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C4_S1
Complex: NACID_D_2(2PJR) / Model_31(2PJR/G) = [3.9] Download--MGFEKSILDNLNGAQKIAACHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLTLTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDEVKTLCKQLKISNFRASISQIKNGMMDLSVQDSECYKAYELYQNALKKDNLVDFDDLLCLSLKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSFTHHNLCVVGDDDQSIYGFRGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHKSVICKEYPTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRLIGAVSFYERAEVKDALALMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGLNLEEALKIGAFKDKLNPKNEYALKKFTAMIGRLREAFEISVEKFCERFLEETNLLKSYEKEDNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESALDVHNTENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKISCSPSVFLEEAQLLQQDKPPKQNHQKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKINCGGNVYDKISEKFVEKVDNEF
Complex: NACID_C_1(2PJR) / Model_32(2PJR/B) = [4.3] Download--MGFEKSILDNLNGAQKIAACHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLTLTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDEVKTLCKQLKISNFRASISQIKNGMMDLSVQDSECYKAYELYQNALKKDNLVDFDDLLCLSLKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSFTHHNLCVVGDDDQSIYGFRGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHKSVICKEYPTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRLIGAVSFYERAEVKDALALMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGLNLEEALKIGAFKDKLNPKNEYALKKFTAMIGRLREAFEISVEKFCERFLEETNLLKSYEKEDNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESALDVHNTENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKISCSPSVFLEEAQLLQQDKPPKQNHQKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKINCGGNVYDKISEKFVEKVDNEF
Complex: NACID_C_1(2IS1) / Model_3(2IS1/A) = [5.2] Download--MGFEKSILDNLNGAQKIAACHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLTLTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDEVKTLCKQLKISNFRASISQIKNGMMDLSVQDSECYKAYELYQNALKKDNLVDFDDLLCLSLKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSFTHHNLCVVGDDDQSIYGFRGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHKSVICKEYPTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRLIGAVSFYERAEVKDALALMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGLNLEEALKIGAFKDKLNPKNEYALKKFTAMIGRLREAFEISVEKFCERFLEETNLLKSYEKEDNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESALDVHNTENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKISCSPSVFLEEAQLLQQDKPPKQNHQKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKINCGGNVYDKISEKFVEKVDNEF
Complex: NACID_E_3(2IS1) / Model_21(2IS1/B) = [6.3] Download--MGFEKSILDNLNGAQKIAACHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLTLTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDEVKTLCKQLKISNFRASISQIKNGMMDLSVQDSECYKAYELYQNALKKDNLVDFDDLLCLSLKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSFTHHNLCVVGDDDQSIYGFRGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHKSVICKEYPTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRLIGAVSFYERAEVKDALALMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGLNLEEALKIGAFKDKLNPKNEYALKKFTAMIGRLREAFEISVEKFCERFLEETNLLKSYEKEDNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESALDVHNTENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKISCSPSVFLEEAQLLQQDKPPKQNHQKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKINCGGNVYDKISEKFVEKVDNEF
Complex: NACID_Y_1(3PJR) / Model_1(3PJR/A) = [6.3] Download--MGFEKSILDNLNGAQKIAACHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLTLTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDEVKTLCKQLKISNFRASISQIKNGMMDLSVQDSECYKAYELYQNALKKDNLVDFDDLLCLSLKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSFTHHNLCVVGDDDQSIYGFRGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHKSVICKEYPTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRLIGAVSFYERAEVKDALALMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGLNLEEALKIGAFKDKLNPKNEYALKKFTAMIGRLREAFEISVEKFCERFLEETNLLKSYEKEDNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESALDVHNTENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKISCSPSVFLEEAQLLQQDKPPKQNHQKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKINCGGNVYDKISEKFVEKVDNEF
Consensus
[pKd Mean = 5.20]
-0
(s=0)
0
(s=0)
MGFEKSILDNLNGAQKIAACHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLTLTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDEVKTLCKQLKISNFRASISQIKNGMMDLSVQDSECYKAYELYQNALKKDNLVDFDDLLCLSLKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSFTHHNLCVVGDDDQSIYGFRGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHKSVICKEYPTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRLIGAVSFYERAEVKDALALMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGLNLEEALKIGAFKDKLNPKNEYALKKFTAMIGRLREAFEISVEKFCERFLEETNLLKSYEKEDNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESALDVHNTENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKISCSPSVFLEEAQLLQQDKPPKQNHQKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKINCGGNVYDKISEKFVEKVDNEF