Study : Lmo0537 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C3_S1
Best Complexes choosen after comparative docking [pKd > 3] : 4 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C3_S1
Complex: HGY_B_8(4PXC) / Model_25(4PXC/B) = [3.1] Download319.606.50MQTNLERIKKHIEKLDTFTATPGQGTTRLTYSKEDLDARNYLKQEMAKVGLTVSEDAIGNIYGRLEGESPDLPAVIVGSHFDSVPNGGAFDGPAGVITGLEVASVFHEQQIKPHFPLEIIAMVEEEGSRFGAGLLASRAITGKVTTEMLHEMKDIDGITATDAMAKLGFNANRVHRAIRTKESVKAFIELHIEQGPILENASEDVALVDTVVGLTQIKVTVKGQAGHAGTTPMLDRKDALVSAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVIFTVDIRAKDEIHVQNTLAKTKEIIQATEKNGITCEIKDMIYQQPTHLSKEIHQALTESADQLGFKYRTMVSGAGHDAMIFASLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVVLKTVKKWTEESANESENKTNSFK
Complex: HGY_A_5(4PXC) / Model_6(4PXC/A) = [3.2] Download382.597.60MQTNLERIKKHIEKLDTFTATPGQGTTRLTYSKEDLDARNYLKQEMAKVGLTVSEDAIGNIYGRLEGESPDLPAVIVGSHFDSVPNGGAFDGPAGVITGLEVASVFHEQQIKPHFPLEIIAMVEEEGSRFGAGLLASRAITGKVTTEMLHEMKDIDGITATDAMAKLGFNANRVHRAIRTKESVKAFIELHIEQGPILENASEDVALVDTVVGLTQIKVTVKGQAGHAGTTPMLDRKDALVSAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVIFTVDIRAKDEIHVQNTLAKTKEIIQATEKNGITCEIKDMIYQQPTHLSKEIHQALTESADQLGFKYRTMVSGAGHDAMIFASLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVVLKTVKKWTEESANESENKTNSFK
Complex: UGC_A_5(4PXB) / Model_5(4PXB/A) = [3.6] Download406.963.18MQTNLERIKKHIEKLDTFTATPGQGTTRLTYSKEDLDARNYLKQEMAKVGLTVSEDAIGNIYGRLEGESPDLPAVIVGSHFDSVPNGGAFDGPAGVITGLEVASVFHEQQIKPHFPLEIIAMVEEEGSRFGAGLLASRAITGKVTTEMLHEMKDIDGITATDAMAKLGFNANRVHRAIRTKESVKAFIELHIEQGPILENASEDVALVDTVVGLTQIKVTVKGQAGHAGTTPMLDRKDALVSAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVIFTVDIRAKDEIHVQNTLAKTKEIIQATEKNGITCEIKDMIYQQPTHLSKEIHQALTESADQLGFKYRTMVSGAGHDAMIFASLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVVLKTVKKWTEESANESENKTNSFK
Complex: UGC_B_8(4PXB) / Model_26(4PXB/B) = [5.2] Download370.046.81MQTNLERIKKHIEKLDTFTATPGQGTTRLTYSKEDLDARNYLKQEMAKVGLTVSEDAIGNIYGRLEGESPDLPAVIVGSHFDSVPNGGAFDGPAGVITGLEVASVFHEQQIKPHFPLEIIAMVEEEGSRFGAGLLASRAITGKVTTEMLHEMKDIDGITATDAMAKLGFNANRVHRAIRTKESVKAFIELHIEQGPILENASEDVALVDTVVGLTQIKVTVKGQAGHAGTTPMLDRKDALVSAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVIFTVDIRAKDEIHVQNTLAKTKEIIQATEKNGITCEIKDMIYQQPTHLSKEIHQALTESADQLGFKYRTMVSGAGHDAMIFASLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVVLKTVKKWTEESANESENKTNSFK
Consensus
[pKd Mean = 3.78]
-369
(s=31)
6
(s=1)
MQTNLERIKKHIEKLDTFTATPGQGTTRLTYSKEDLDARNYLKQEMAKVGLTVSEDAIGNIYGRLEGESPDLPAVIVGSHFDSVPNGGAFDGPAGVITGLEVASVFHEQQIKPHFPLEIIAMVEEEGSRFGAGLLASRAITGKVTTEMLHEMKDIDGITATDAMAKLGFNANRVHRAIRTKESVKAFIELHIEQGPILENASEDVALVDTVVGLTQIKVTVKGQAGHAGTTPMLDRKDALVSAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVIFTVDIRAKDEIHVQNTLAKTKEIIQATEKNGITCEIKDMIYQQPTHLSKEIHQALTESADQLGFKYRTMVSGAGHDAMIFASLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVVLKTVKKWTEESANESENKTNSFK