Study : Lmo0928 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C3_S1
Best Complexes choosen after comparative docking [pKd > 3] : 4 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C3_S1
Complex: NACID_C_3(3UBY) / Model_4(3UBY/A) = [5.9] Download--MEAMITKEFFESKTTIELARDILGMRLVHQTNEGLLSGLIVETEAYLGATDMAAHSFQNLRTKRTEVMFSSPGTIYMYQMHRQVLLNFITMPKGIPEAILIRAIEPDEQAKQQMTQNRHGKTGYELTNGPGKLTQALGLSMQDYGKTLFDSNIWLEEAKLPHLIEATNRIGVPNKGIATHYPLRFTVKGSPYISGQRKNSIRTGIWK
Complex: NACID_D_1(1EWN) / Model_5(1EWN/A) = [6.1] Download--MEAMITKEFFESKTTIELARDILGMRLVHQTNEGLLSGLIVETEAYLGATDMAAHSFQNLRTKRTEVMFSSPGTIYMYQMHRQVLLNFITMPKGIPEAILIRAIEPDEQAKQQMTQNRHGKTGYELTNGPGKLTQALGLSMQDYGKTLFDSNIWLEEAKLPHLIEATNRIGVPNKGIATHYPLRFTVKGSPYISGQRKNSIRTGIWK
Complex: NACID_C_3(3QI5) / Model_3(3QI5/A) = [6.1] Download--MEAMITKEFFESKTTIELARDILGMRLVHQTNEGLLSGLIVETEAYLGATDMAAHSFQNLRTKRTEVMFSSPGTIYMYQMHRQVLLNFITMPKGIPEAILIRAIEPDEQAKQQMTQNRHGKTGYELTNGPGKLTQALGLSMQDYGKTLFDSNIWLEEAKLPHLIEATNRIGVPNKGIATHYPLRFTVKGSPYISGQRKNSIRTGIWK
Complex: NACID_D_1(1F4R) / Model_1(1F4R/A) = [8.0] Download--MEAMITKEFFESKTTIELARDILGMRLVHQTNEGLLSGLIVETEAYLGATDMAAHSFQNLRTKRTEVMFSSPGTIYMYQMHRQVLLNFITMPKGIPEAILIRAIEPDEQAKQQMTQNRHGKTGYELTNGPGKLTQALGLSMQDYGKTLFDSNIWLEEAKLPHLIEATNRIGVPNKGIATHYPLRFTVKGSPYISGQRKNSIRTGIWK
Consensus
[pKd Mean = 6.53]
-0
(s=0)
0
(s=0)
MEAMITKEFFESKTTIELARDILGMRLVHQTNEGLLSGLIVETEAYLGATDMAAHSFQNLRTKRTEVMFSSPGTIYMYQMHRQVLLNFITMPKGIPEAILIRAIEPDEQAKQQMTQNRHGKTGYELTNGPGKLTQALGLSMQDYGKTLFDSNIWLEEAKLPHLIEATNRIGVPNKGIATHYPLRFTVKGSPYISGQRKNSIRTGIWK