Study : Lmo0942 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C6_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C6_S1
Complex: GOL_A_3(3B28) / Model_87(3B28/A) = [3.1] Download896.26-5.70MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRARKKIDSTLEGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDGESSNDFIGRFGIGLLSCFIVSDEIVMISTSQKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEEINSWTKQFSDKETLSTLSREQIIQYGEYILGTHFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKNTVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIAKNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML
Complex: LGA_A_4(2XDU) / Model_54(2XDU/A) = [3.1] Download483.5839.73MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRARKKIDSTLEGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDGESSNDFIGRFGIGLLSCFIVSDEIVMISTSQKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEEINSWTKQFSDKETLSTLSREQIIQYGEYILGTHFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKNTVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIAKNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML
Complex: 42C_A_3(4FCP) / Model_98(4FCP/A) = [3.2] Download608.0930.79MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRARKKIDSTLEGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDGESSNDFIGRFGIGLLSCFIVSDEIVMISTSQKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEEINSWTKQFSDKETLSTLSREQIIQYGEYILGTHFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKNTVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIAKNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML
Complex: B2J_B_5(3B24) / Model_91(3B24/B) = [3.3] Download619.6631.00MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRARKKIDSTLEGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDGESSNDFIGRFGIGLLSCFIVSDEIVMISTSQKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEEINSWTKQFSDKETLSTLSREQIIQYGEYILGTHFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKNTVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIAKNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML
Complex: A13_A_3(2QFO) / Model_53(2QFO/A) = [3.4] Download589.5837.35MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRARKKIDSTLEGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDGESSNDFIGRFGIGLLSCFIVSDEIVMISTSQKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEEINSWTKQFSDKETLSTLSREQIIQYGEYILGTHFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKNTVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIAKNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML
Consensus
[pKd Mean = 3.22]
-639
(s=137)
26
(s=16)
MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRARKKIDSTLEGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDGESSNDFIGRFGIGLLSCFIVSDEIVMISTSQKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEEINSWTKQFSDKETLSTLSREQIIQYGEYILGTHFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKNTVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIAKNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML