Study : Lmo1434 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: U5P_A_5(3BK2) / Model_7(3BK2/A) = [3.1] Download679.5111.59LTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVKAIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMSNNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV
Complex: C5P_B_9(5A0V) / Model_24(5A0V/B) = [4.0] Download1028.405.70LTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVKAIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMSNNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV
Complex: NACID_E_3(5A0T) / Model_2(5A0T/A) = [8.2] Download--LTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVKAIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMSNNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV
Complex: NACID_F_4(5A0V) / Model_24(5A0V/B) = [8.6] Download--LTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVKAIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMSNNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV
Complex: NACID_E_3(5A0V) / Model_3(5A0V/A) = [9.3] Download--LTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVKAIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMSNNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV
Consensus
[pKd Mean = 6.64]
-853
(s=174)
8
(s=3)
LTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVKAIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMSNNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV