Study : PA5295 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C2_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C2_S1
Complex: EDO_A_11(4Q6J) / Model_16(4Q6J/A) = [3.4] Download445.3724.80MSAPAEPLRLLLLADTPDWAPLLGERLRALGPAFSLSIVTTWEGAATLFAAEPRGLLLATPACLPLGTPCPWPVILLLQQEPAQAPVGVVDWLAAEQLSEDSLRRCLRYARERLGLQATLQLLAEQDPLTGIANRQGFQTLLAARLSEFDGRGLVLGHLDLDNFRHVNDSLGHQGGDRLILQVVNRLRGFMENGDSLARLGSDEFALLLDTRRDPQRAERVAERIVECLGEPYWIDGESLLLGCSLGLAHARADEGADPLMWHAHIAMQQAKSRQGCTFHVFDERINRGVRSLADLEAELRRALRRDELELHYQPRLCLDSGRIVGLEALVRWRHGERGLLTPSEFVPLAEESGLIVPLGYWVIARALRDMQWLNGRGLEPLHMAVNLSFRQFQDSQLLPTLQRLIEEHGVDARWLEFELTETAVMRRSDQVLQTMQALGQLGVRFSLDDFGTGFSSFVHLNSLPITLLKIDRSFVGGMDQRAENFQLVRAMINLAHNLNLEVVAEGVETLRQQEQLRDFGCDQVQGYWISPPLPLAELARFLGIGERSAHRGQPLGN
Complex: C2E_A_4(4RNH) / Model_1(4RNH/A) = [7.7] Download1957.5527.03MSAPAEPLRLLLLADTPDWAPLLGERLRALGPAFSLSIVTTWEGAATLFAAEPRGLLLATPACLPLGTPCPWPVILLLQQEPAQAPVGVVDWLAAEQLSEDSLRRCLRYARERLGLQATLQLLAEQDPLTGIANRQGFQTLLAARLSEFDGRGLVLGHLDLDNFRHVNDSLGHQGGDRLILQVVNRLRGFMENGDSLARLGSDEFALLLDTRRDPQRAERVAERIVECLGEPYWIDGESLLLGCSLGLAHARADEGADPLMWHAHIAMQQAKSRQGCTFHVFDERINRGVRSLADLEAELRRALRRDELELHYQPRLCLDSGRIVGLEALVRWRHGERGLLTPSEFVPLAEESGLIVPLGYWVIARALRDMQWLNGRGLEPLHMAVNLSFRQFQDSQLLPTLQRLIEEHGVDARWLEFELTETAVMRRSDQVLQTMQALGQLGVRFSLDDFGTGFSSFVHLNSLPITLLKIDRSFVGGMDQRAENFQLVRAMINLAHNLNLEVVAEGVETLRQQEQLRDFGCDQVQGYWISPPLPLAELARFLGIGERSAHRGQPLGN
Complex: C2E_A_3(3N3T) / Model_6(3N3T/A) = [7.8] Download1656.6430.40MSAPAEPLRLLLLADTPDWAPLLGERLRALGPAFSLSIVTTWEGAATLFAAEPRGLLLATPACLPLGTPCPWPVILLLQQEPAQAPVGVVDWLAAEQLSEDSLRRCLRYARERLGLQATLQLLAEQDPLTGIANRQGFQTLLAARLSEFDGRGLVLGHLDLDNFRHVNDSLGHQGGDRLILQVVNRLRGFMENGDSLARLGSDEFALLLDTRRDPQRAERVAERIVECLGEPYWIDGESLLLGCSLGLAHARADEGADPLMWHAHIAMQQAKSRQGCTFHVFDERINRGVRSLADLEAELRRALRRDELELHYQPRLCLDSGRIVGLEALVRWRHGERGLLTPSEFVPLAEESGLIVPLGYWVIARALRDMQWLNGRGLEPLHMAVNLSFRQFQDSQLLPTLQRLIEEHGVDARWLEFELTETAVMRRSDQVLQTMQALGQLGVRFSLDDFGTGFSSFVHLNSLPITLLKIDRSFVGGMDQRAENFQLVRAMINLAHNLNLEVVAEGVETLRQQEQLRDFGCDQVQGYWISPPLPLAELARFLGIGERSAHRGQPLGN
Complex: NACID_C_3(3U2E) / Model_11(3U2E/A) = [8.1] Download--MSAPAEPLRLLLLADTPDWAPLLGERLRALGPAFSLSIVTTWEGAATLFAAEPRGLLLATPACLPLGTPCPWPVILLLQQEPAQAPVGVVDWLAAEQLSEDSLRRCLRYARERLGLQATLQLLAEQDPLTGIANRQGFQTLLAARLSEFDGRGLVLGHLDLDNFRHVNDSLGHQGGDRLILQVVNRLRGFMENGDSLARLGSDEFALLLDTRRDPQRAERVAERIVECLGEPYWIDGESLLLGCSLGLAHARADEGADPLMWHAHIAMQQAKSRQGCTFHVFDERINRGVRSLADLEAELRRALRRDELELHYQPRLCLDSGRIVGLEALVRWRHGERGLLTPSEFVPLAEESGLIVPLGYWVIARALRDMQWLNGRGLEPLHMAVNLSFRQFQDSQLLPTLQRLIEEHGVDARWLEFELTETAVMRRSDQVLQTMQALGQLGVRFSLDDFGTGFSSFVHLNSLPITLLKIDRSFVGGMDQRAENFQLVRAMINLAHNLNLEVVAEGVETLRQQEQLRDFGCDQVQGYWISPPLPLAELARFLGIGERSAHRGQPLGN
Complex: C2E_A_4(4HJF) / Model_9(4HJF/A) = [9.2] Download1385.1327.25MSAPAEPLRLLLLADTPDWAPLLGERLRALGPAFSLSIVTTWEGAATLFAAEPRGLLLATPACLPLGTPCPWPVILLLQQEPAQAPVGVVDWLAAEQLSEDSLRRCLRYARERLGLQATLQLLAEQDPLTGIANRQGFQTLLAARLSEFDGRGLVLGHLDLDNFRHVNDSLGHQGGDRLILQVVNRLRGFMENGDSLARLGSDEFALLLDTRRDPQRAERVAERIVECLGEPYWIDGESLLLGCSLGLAHARADEGADPLMWHAHIAMQQAKSRQGCTFHVFDERINRGVRSLADLEAELRRALRRDELELHYQPRLCLDSGRIVGLEALVRWRHGERGLLTPSEFVPLAEESGLIVPLGYWVIARALRDMQWLNGRGLEPLHMAVNLSFRQFQDSQLLPTLQRLIEEHGVDARWLEFELTETAVMRRSDQVLQTMQALGQLGVRFSLDDFGTGFSSFVHLNSLPITLLKIDRSFVGGMDQRAENFQLVRAMINLAHNLNLEVVAEGVETLRQQEQLRDFGCDQVQGYWISPPLPLAELARFLGIGERSAHRGQPLGN
Consensus
[pKd Mean = 7.24]
-1361
(s=566)
27
(s=2)
MSAPAEPLRLLLLADTPDWAPLLGERLRALGPAFSLSIVTTWEGAATLFAAEPRGLLLATPACLPLGTPCPWPVILLLQQEPAQAPVGVVDWLAAEQLSEDSLRRCLRYARERLGLQATLQLLAEQDPLTGIANRQGFQTLLAARLSEFDGRGLVLGHLDLDNFRHVNDSLGHQGGDRLILQVVNRLRGFMENGDSLARLGSDEFALLLDTRRDPQRAERVAERIVECLGEPYWIDGESLLLGCSLGLAHARADEGADPLMWHAHIAMQQAKSRQGCTFHVFDERINRGVRSLADLEAELRRALRRDELELHYQPRLCLDSGRIVGLEALVRWRHGERGLLTPSEFVPLAEESGLIVPLGYWVIARALRDMQWLNGRGLEPLHMAVNLSFRQFQDSQLLPTLQRLIEEHGVDARWLEFELTETAVMRRSDQVLQTMQALGQLGVRFSLDDFGTGFSSFVHLNSLPITLLKIDRSFVGGMDQRAENFQLVRAMINLAHNLNLEVVAEGVETLRQQEQLRDFGCDQVQGYWISPPLPLAELARFLGIGERSAHRGQPLGN