@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00017_JAK2_M: (2014-08-09 )
MGMACLTMTEMEATSTSPVHQNGDIPGSANSVKQIEPVLQVYLYHSLGQAEGEYLKFPSGEYVAEEICVAASKACGITPVYHNMFALMSETERIWYPPNHVFHIDESTRHDILYRIRFYFPHWYCSGSSRTYRYGVSRGAEAPLLDDFVMSYLFAQWRHDFVHGWIKVPVTHETQEECLGMAVLDMMRIAKEKDQTPLAVYNSVSYKTFLPKCVRAKIQDYHILTRKRIRYRFRRFIQQFSQCKATARNLKLKYLINLETLQSAFYTEQFEVKESARGPSGEEIFATIIITGNGGIQWSRGKHKESETLTEQDVQLYCDFPDIIDVSIKQANQECSNESRIVTVHKQDGKVLEIELSSLKEALSFVSLIDGYYRLTADAHHYLCKEVAPPAVLENIHSNCHGPISMDFAISKLKKAGNQTGLYVLRCSPKDFNKYFLTFAVERENVIEYKHCLITKNENGEYNLSGTKRNFSNLKDLLNCYQMETVRSDSIIFQFTKCCPPKPKDKSNLLVFRTNGISDVQISPTLQRHNNVNQMVFHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHKTEVLLKVLDKAHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGEENILVQEFVKFGSLDTYLKKNKNSINILWKLGVAKQLAWAMHFLEEKSLIHGNVCAKNILLIREENRRTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDKHQLPAPKWTELANLINNCMDYEPDFRPAFRAVIRDLNSLFTPDYELLTENDMLPNMRIGALGFSGAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLIMEYLPYGSLRDYLQKHKERIDHKKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPVEFMRMIGNDKQGQMIVFHLIELLKSNGRLPRPEGCPDEIYVIMTECWNNNVSQRPSFRDLSLRVDQIIAA

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0MX_A_2(4E1Z)

[Raw transfer]



O19_A_5(4BBF)
JAK2_HUMAN
[Raw transfer]



046_A_2(3UGC)

[Raw transfer]



046_A_2(3UGC)

[Raw transfer]



O19_D_8(4BBF)

[Raw transfer]



ADP_A_2(4GVJ)

[Raw transfer]



19Q_A_2(4HVG)

[Raw transfer]



ANP_A_2(4FL3)
KSYK_HUMAN
[Raw transfer]



19S_A_2(4HVI)

[Raw transfer]



3O4_A_5(4BBE)
JAK2_HUMAN
[Raw transfer]



933_A_3(4HVD)
?
[Raw transfer]



19R_A_2(4HVH)

[Raw transfer]



ANP_A_3(2OZO)
ZAP70_HUMAN
[Raw transfer]



O19_C_7(4BBF)
JAK2_HUMAN
[Raw transfer]



MI1_A_2(3LXK)

[Raw transfer]



1DT_A_3(4I6Q)

[Raw transfer]



3O4_D_8(4BBE)

[Raw transfer]



3O4_C_7(4BBE)
JAK2_HUMAN
[Raw transfer]



STU_A_3(3CBL)

[Raw transfer]



3O4_B_6(4BBE)
JAK2_HUMAN
[Raw transfer]



STU_A_2(1U59)

[Raw transfer]



0X5_A_2(4GIH)

[Raw transfer]



V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]



0XH_A_2(4GJ2)

[Raw transfer]



IZA_A_2(3LXL)

[Raw transfer]



0X6_A_2(4GII)

[Raw transfer]



0XP_A_2(4GJ3)

[Raw transfer]



IZA_A_2(3LXL)

[Raw transfer]
2 PsiBlast_PDB 84.9696% -88 - C2 -4BBF 8.1 JAK2_HUMAN
21 PsiBlast_CBE 83.3996% -87 - C2 -4BBF 8.1
37 HHSearch 82.9996% -87 - C2 -3UGC 12.2
23 PsiBlast_CBE 82.3696% -87 - C2 -4BBF - JAK2_HUMAN
22 PsiBlast_CBE 80.6696% -87 - C2 -4BBF 8.1 JAK2_HUMAN
1 PsiBlast_PDB 80.3796% -88 - C2 -4BBE 7.8 JAK2_HUMAN
24 PsiBlast_CBE 80.1196% -89 - C2 -4BBE 7.5
25 PsiBlast_CBE 79.7396% -83 - C2 -4BBE 7.2 JAK2_HUMAN
26 PsiBlast_CBE 79.4796% -83 - C2 -4BBE 7.0 JAK2_HUMAN
38 HHSearch 69.3261% -82 - C2 -3LXL 7.5
10 PsiBlast_PDB 68.1462% -84 - C2 -4HVI 6.5
8 PsiBlast_PDB 68.1062% -82 - C2 -4HVG 5.8
13 PsiBlast_PDB 68.0162% -81 - C2 -3LXK 6.5
11 PsiBlast_PDB 67.7062% -82 - C2 -4I6Q 6.4
9 PsiBlast_PDB 67.5762% -85 - C2 -4HVH 5.5
7 PsiBlast_PDB 66.8162% -82 - C2 -4HVD 6.1 ?
20 PsiBlast_PDB 63.9153% -78 - C2 -4E1Z 9.4
15 PsiBlast_PDB 63.1653% -78 - C2 -4GVJ 6.0
16 PsiBlast_PDB 62.7253% -76 - C2 -4GII 6.5
18 PsiBlast_PDB 62.1453% -76 - C2 -4GJ3 6.4
61 HHSearch 61.3638% -83 - C2 -4AOJ 7.8 NTRK1_HUMAN
17 PsiBlast_PDB 61.1453% -74 - C2 -4GJ2 6.2
19 PsiBlast_PDB 60.4853% -71 - C2 -4GIH 6.1
45 HHSearch 48.4836% -72 - C2 -4FL3 6.4 KSYK_HUMAN
64 HHSearch 46.1235% -68 * C2 *3CBL 8.6
60 HHSearch 45.5535% -69 - C2 -1U59 8.9
42 HHSearch 43.2235% -70 - C2 -2OZO 5.8 ZAP70_HUMAN