@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00074_RNAS2_: (2014-08-21 )
MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII

Atome Classification :

(10 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AP5_A_2(2BZZ)
RNAS2_HUMAN
[Raw transfer]




A3P_A_2(1HI4)
RNAS2_HUMAN
[Raw transfer]




B4P_A_2(2C05)
RNAS2_HUMAN
[Raw transfer]




ADP_A_2(2C02)
RNAS2_HUMAN
[Raw transfer]




ATP_X_3(2C01)
RNAS2_HUMAN
[Raw transfer]




ADP_A_2(1HI5)
RNAS2_HUMAN
[Raw transfer]




A2P_A_2(1HI3)
RNAS2_HUMAN
[Raw transfer]




A2P_A_2(1H1H)
ECP_HUMAN
[Raw transfer]




CIT_A_5(1DYT)
ECP_HUMAN
[Raw transfer]




CIT_A_4(4A2Y)
ECP_HUMAN
[Raw transfer]




3 PsiBlast_PDB 98.9299%-117 - C4 -1HI3 4.2 RNAS2_HUMAN
5 PsiBlast_PDB 98.0199%-120 - C4 -1HI5 4.8 RNAS2_HUMAN
9 PsiBlast_PDB 97.6699%-116 - C4 -2C02 5.3 RNAS2_HUMAN
10 PsiBlast_PDB 97.2899%-115 - C4 -2C05 6.2 RNAS2_HUMAN
7 PsiBlast_PDB 97.2499%-113 - C4 -2BZZ 8.2 RNAS2_HUMAN
8 PsiBlast_PDB 97.0699%-114 - C4 -2C01 3.9 RNAS2_HUMAN
4 PsiBlast_PDB 96.1099%-117 - C4 -1HI4 5.6 RNAS2_HUMAN
12 PsiBlast_PDB 85.6765%-112 - C4 -1H1H 3.1 ECP_HUMAN
16 PsiBlast_PDB 83.5965%-100 - C4 -4A2Y 2.9 ECP_HUMAN
13 PsiBlast_PDB 83.1065% -98 - C4 -1DYT 3.3 ECP_HUMAN