@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00084_GABR1_: (2014-08-22 )
MLLLLLVPLFLRPLGAGGAQTPNATSEGCQIIHPPWEGGIRYRGLTRDQVKAINFLPVDYEIEYVCRGEREVVGPKVRKCLANGSWTDMDTPSRCVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCSQGQWSTPKPHCQVNRTPHSERRAVYIGALFPMSGGWPGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSKCDPGQATKYLYELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLHNPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEAGIEITFRQSFFSDPAVPVKNLKRQDARIIVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKTYDPSINCTVEEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQEAPLAYDAIWALALALNKTSGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHVVFDASGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLSWSKTDKWIGGSPPADQTLVIKTFRFLSQKLFISVSVLSSLGIVLAVVCLSFNIYNSHVRYIQNSQPNLNNLTAVGCSLALAAVFPLGLDGYHIGRSQFPFVCQARLWLLGLGFSLGYGSMFTKIWWVHTVFTKKEEKKEWRKTLEPWKLYATVGLLVGMDVLTLAIWQIVDPLHRTIETFAKEEPKEDIDVSILPQLEHCSSKKMNTWLGELWSFAVSSDVQRRATVGGDSPICVWPAPESIFYGYKGLLLLLGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFASLAIVFSSYITLVVLFVPKMRRLITRGEWQSETQDTMKTGSSTNNNEEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPDPSGGLPRGPSEPPDRLSCDGSRVHLLYK

Atome Classification :

(8 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2C0_A_3(4MS4)
GABR1_HUMAN
[Raw transfer]



ABU_A_3(4MS3)
GABR1_HUMAN
[Raw transfer]



2BY_A_3(4MRM)
GABR1_HUMAN
[Raw transfer]



2BQ_A_3(4MQF)
GABR1_HUMAN
[Raw transfer]



2BX_A_3(4MR9)
GABR1_HUMAN
[Raw transfer]



2BW_A_5(4MR8)
GABR1_HUMAN
[Raw transfer]



2BV_A_3(4MR7)
GABR1_HUMAN
[Raw transfer]



381_A_3(4MS1)
GABR1_HUMAN
[Raw transfer]
7 PsiBlast_PDB 99.3099% -96 - C2 -4MS1 4.5 GABR1_HUMAN
4 PsiBlast_PDB 98.6799% -96 - C2 -4MR8 3.9 GABR1_HUMAN
2 PsiBlast_PDB 98.5099% -97 - C2 -4MQF 4.2 GABR1_HUMAN
5 PsiBlast_PDB 98.0899% -98 - C2 -4MR9 4.5 GABR1_HUMAN
6 PsiBlast_PDB 98.0599% -98 - C2 -4MRM 3.8 GABR1_HUMAN
9 PsiBlast_PDB 97.7499%-100 - C2 -4MS4 6.8 GABR1_HUMAN
3 PsiBlast_PDB 97.5399% -98 - C2 -4MR7 7.2 GABR1_HUMAN
8 PsiBlast_PDB 95.5599%-100 - C2 -4MS3 3.7 GABR1_HUMAN