@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_CMA1_R: (2014-08-22 )
MNLHALCLLLLLLGSSTKAGEIIGGTECIPHSRPYMAYLEIVTSDNYLSACSGFLIRRNFVLTAAHCAGRSITVLLGAHNKTYKEDTWQKLEVEKQFIHPNYDKRLVLHDIMLLKLKEKAKLTLGVGTLPLSANFNFIPPGRMCRAVGWGRTNVNEPASDTLQEVKMRLQEPQSCKHFTSFQHKSQLCVGNPKKMQNVYKGDSGGPLLCAGIAQGIASYVHPNAKPPAVFTRISHYRPWINKILREN

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OHH_A_12(1T31)
CMA1_HUMAN
[Raw transfer]



DRX_A_2(2HVX)
CMA1_HUMAN
[Raw transfer]



KTP_B_4(1KYN)
CATG_HUMAN
[Raw transfer]



KPK_A_2(4KP0)
CMA1_HUMAN
[Raw transfer]



1P9_A_5(4K69)
CMA1_HUMAN
[Raw transfer]



PMS_B_2(1KLT)
CMA1_HUMAN
[Raw transfer]



0BB_A_5(3S0N)
CMA1_HUMAN
[Raw transfer]



FMT_A_3(3CP7)
?
[Raw transfer]



N7O_A_2(3N7O)
CMA1_HUMAN
[Raw transfer]



ES2_A_4(4K2Y)
CMA1_HUMAN
[Raw transfer]



1P8_A_4(4K60)
CMA1_HUMAN
[Raw transfer]



LMR_B_10(4AG2)
CMA1_HUMAN
[Raw transfer]



TAR_A_5(4AFZ)
CMA1_HUMAN
[Raw transfer]



1P7_A_4(4K5Z)
CMA1_HUMAN
[Raw transfer]



CHAIN_S_2(1CGH)
CATG_HUMAN
[Raw transfer]
-
CHAIN_I_2(1PJP)
CMA1_HUMAN
[Raw transfer]
-
MES_A_5(4AG2)
CMA1_HUMAN
[Raw transfer]



CHAIN_I_3(2RDL)
?
[Raw transfer]
-
CHAIN_J_4(2RDL)
?
[Raw transfer]
-
CHAIN_I_3(2RDL)
?
[Raw transfer]
-
CH2_I_5(1FXY)
TRY1_HUMAN
[Raw transfer]
21 PsiBlast_CBE 97.3284%-121 - C1 -2RDL 1.6 ?
1 PsiBlast_PDB 97.1584%-122 - C1 -2RDL 2.5 ?
10 PsiBlast_PDB 92.8473%-122 - C1 -1PJP 2.7 CMA1_HUMAN
5 PsiBlast_PDB 92.4573%-116 - C1 -4AFZ 2.4 CMA1_HUMAN
8 PsiBlast_PDB 92.3873%-119 - C1 -1KLT 2.3 CMA1_HUMAN
22 PsiBlast_CBE 92.2973%-121 - C1 -4AG2 3.9 CMA1_HUMAN
12 PsiBlast_PDB 91.1873%-118 - C1 -2HVX 4.8 CMA1_HUMAN
13 PsiBlast_PDB 91.0873%-120 - C1 -3S0N 4.5 CMA1_HUMAN
11 PsiBlast_PDB 90.6373%-114 - C1 -1T31 5.9 CMA1_HUMAN
9 PsiBlast_PDB 90.5773%-114 - C1 -3N7O 5.6 CMA1_HUMAN
15 PsiBlast_PDB 90.0073%-119 - C1 -4K5Z 1.4 CMA1_HUMAN
6 PsiBlast_PDB 90.0073%-120 - C1 -4AG2 2.0 CMA1_HUMAN
16 PsiBlast_PDB 89.4773%-115 - C1 -4K60 2.6 CMA1_HUMAN
7 PsiBlast_PDB 88.5173%-120 - C1 -4KP0 5.9 CMA1_HUMAN
14 PsiBlast_PDB 87.6073%-114 - C1 -4K2Y 2.8 CMA1_HUMAN
17 PsiBlast_PDB 86.6973%-113 - C1 -4K69 5.6 CMA1_HUMAN
20 PsiBlast_PDB 79.9844%-120 - C1 -1KYN 5.0 CATG_HUMAN
38 HHSearch 79.2245%-118 * C1 *1CGH 5.0 CATG_HUMAN