@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_FA9_HU: (2014-08-23 )
MQRVNMIMAESPGLITICLLGYLLSAECTVFLDHENANKILNRPKRYNSGKLEEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCELDVTCNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCGRVSVSQTSKLTRAETVFPDVDYVNSTEAETILDNITQSTQSFNDFTRVVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTIYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTKLT

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IZX_A_4(3LC5)
?
[Raw transfer]



S00_H_5(3RM2)
?
[Raw transfer]



1NK_H_3(4JZE)
?
[Raw transfer]



RPR_A_4(1EZQ)
?
[Raw transfer]



PR2_A_4(1F0S)
?
[Raw transfer]



0G6_C_3(1PFX)
FA9_PIG
[Raw transfer]



187_C_3(1X7A)
?
[Raw transfer]



815_A_4(1F0R)

[Raw transfer]



PBZ_A_4(1RFN)
FA9_HUMAN
[Raw transfer]



IYX_A_5(3LC3)
?
[Raw transfer]



IIE_B_4(2BQW)
?
[Raw transfer]



IYX_C_8(3LC3)
?
[Raw transfer]



GOL_H_8(3RM2)
?
[Raw transfer]



IID_A_3(2BQ7)
?
[Raw transfer]



CHAIN_L_2(2WPH)
?
[Raw transfer]
-
INH_A_2(3BG8)

[Raw transfer]



CHAIN_L_2(2WPK)
?
[Raw transfer]
-
IIB_B_4(2BQ6)
?
[Raw transfer]



CHAIN_L_2(2WPJ)
?
[Raw transfer]
-
CHAIN_L_2(2WPI)
?
[Raw transfer]
-
CHAIN_L_2(2WPM)
?
[Raw transfer]
-
IYX_C_9(3LC3)
?
[Raw transfer]



IYX_A_6(3LC3)
?
[Raw transfer]



EDO_S_5(2WPK)
?
[Raw transfer]



CHAIN_L_2(2WPL)
?
[Raw transfer]
-
CHAIN_I_3(1FXY)
TRY1_HUMAN
[Raw transfer]
-
CH2_I_5(1FXY)
TRY1_HUMAN
[Raw transfer]
5 PsiBlast_PDB 94.8799%-108 - C1 -2WPI 5.7 ?
3 PsiBlast_PDB 94.75100%-106 - C1 -3LC5 7.6 ?
9 PsiBlast_PDB 94.2998%-108 - C1 -2WPL 5.4 ?
7 PsiBlast_PDB 94.2098%-106 - C1 -2WPJ 5.7 ?
10 PsiBlast_PDB 94.0998%-104 - C1 -2WPM 3.6 ?
34 HHSearch 93.5999%-108 - C1 -2WPH 6.0 ?
8 PsiBlast_PDB 93.3098%-106 - C1 -2WPK 5.8 ?
2 PsiBlast_PDB 92.81100%-107 - C1 -3LC3 5.3 ?
1 PsiBlast_PDB 92.31100%-107 - C1 -1RFN 3.3 FA9_HUMAN
21 PsiBlast_CBE 90.30100%-104 - C1 -3LC3 5.1 ?
11 PsiBlast_PDB 87.1888%-103 - C1 -1PFX 5.0 FA9_PIG
12 PsiBlast_PDB 85.3088%-102 - C1 -1X7A 9.0 ?
19 PsiBlast_PDB 75.2743% -99 - C1 -1F0R 6.7
18 PsiBlast_PDB 74.8443%-102 - C1 -1EZQ 8.7 ?
20 PsiBlast_PDB 73.9843% -97 - C1 -1F0S 6.6 ?
15 PsiBlast_PDB 72.3643% -94 - C1 -2BQ7 7.9 ?
37 HHSearch 71.5941% -98 - C1 -4JZE 7.4 ?
16 PsiBlast_PDB 71.2843% -96 - C1 -2BQW 7.2 ?
14 PsiBlast_PDB 70.0843% -92 - C1 -2BQ6 9.0 ?
53 HHSearch 70.0538% -95 - C1 -3BG8 4.2
45 HHSearch 69.2138% -93 - C1 -3RM2 5.5 ?
50 HHSearch 67.6442% -92 - C1 -1FXY 4.5 TRY1_HUMAN