@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_MCPT9_: (2014-08-23 )
MQALLFLMALLLPSRAGAEEIIGGVESEPHSRPYMAYVNTFSKKGYVAICGGFLIAPQFVMTAAHCSGRRMTVTLGAHNVRKRECTQQKIKVEKYILPPNYNVSSKFNDIVLLKLKKQANLTSAVDVVPLPGPSDFAKPGTMCWAAGWGRTGVKKSISHTLREVELKIVGEKACKIFRHYKDSLQICVGSSTKVASVYMGDSGGPLLCAGVAHGIVSSGRGNAKPPAIFTRISPHVPWINRVIKGE

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OHH_A_12(1T31)
CMA1_HUMAN
[Raw transfer]




KPK_A_2(4KP0)
CMA1_HUMAN
[Raw transfer]




1P9_A_5(4K69)
CMA1_HUMAN
[Raw transfer]




DRX_A_2(2HVX)
CMA1_HUMAN
[Raw transfer]




KTP_B_4(1KYN)
CATG_HUMAN
[Raw transfer]




0BB_A_5(3S0N)
CMA1_HUMAN
[Raw transfer]




N7O_A_2(3N7O)
CMA1_HUMAN
[Raw transfer]




PMS_B_2(1KLT)
CMA1_HUMAN
[Raw transfer]




1NB_B_2(1BRU)
CEL2A_PIG
[Raw transfer]




1P8_A_4(4K60)
CMA1_HUMAN
[Raw transfer]




ES2_A_4(4K2Y)
CMA1_HUMAN
[Raw transfer]




TAR_A_5(4AFZ)
CMA1_HUMAN
[Raw transfer]




1P7_A_4(4K5Z)
CMA1_HUMAN
[Raw transfer]




CHAIN_S_2(1AU8)
CATG_HUMAN
[Raw transfer]

-

CHAIN_S_2(1CGH)
CATG_HUMAN
[Raw transfer]

-

CHAIN_I_2(1PJP)
CMA1_HUMAN
[Raw transfer]

-

CHAIN_I_3(2RDL)
?
[Raw transfer]

-

CH2_I_5(1FXY)
TRY1_HUMAN
[Raw transfer]




2 PsiBlast_PDB 88.1356%-116 - C1 -1KLT 2.7 CMA1_HUMAN
9 PsiBlast_PDB 87.7655%-121 - C1 -1PJP 3.4 CMA1_HUMAN
11 PsiBlast_PDB 86.8955%-118 - C1 -2HVX 5.1 CMA1_HUMAN
36 HHSearch 86.0048%-121 - C1 -1CGH 4.3 CATG_HUMAN
20 PsiBlast_PDB 85.7947%-119 - C1 -1AU8 3.5 CATG_HUMAN
18 PsiBlast_PDB 85.4151%-122 - C1 -2RDL 3.1 ?
6 PsiBlast_PDB 85.0655%-112 - C1 -4AFZ 3.3 CMA1_HUMAN
19 PsiBlast_PDB 84.9947%-123 - C1 -1KYN 5.0 CATG_HUMAN
14 PsiBlast_PDB 84.4055%-118 - C1 -4K5Z 2.7 CMA1_HUMAN
10 PsiBlast_PDB 84.4055%-112 - C1 -1T31 7.2 CMA1_HUMAN
12 PsiBlast_PDB 84.2455%-116 - C1 -3S0N 5.8 CMA1_HUMAN
17 PsiBlast_PDB 83.5655%-113 - C1 -3N7O 7.6 CMA1_HUMAN
15 PsiBlast_PDB 83.3455%-117 - C1 -4K60 3.2 CMA1_HUMAN
8 PsiBlast_PDB 82.5555%-120 - C1 -4KP0 6.0 CMA1_HUMAN
13 PsiBlast_PDB 81.8455%-114 - C1 -4K2Y 3.1 CMA1_HUMAN
16 PsiBlast_PDB 81.6955%-115 - C1 -4K69 6.4 CMA1_HUMAN
52 HHSearch 75.0434%-112 - C1 -1BRU 3.1 CEL2A_PIG