@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_TM11D_: (2014-08-23 )
MYRPARVTSTSRFLNPYVVCFIVVAGVVILAVTIALLVYFLAFDQKSYFYRSSFQLLNVEYNSQLNSPATQEYRTLSGRIESLITKTFKESNLRNQFIRAHVAKLRQDGSGVRADVVMKFQFTRNNNGASMKSRIESVLRQMLNNSGNLEINPSTEITSLTDQAAANWLINECGAGPDLITLSEQRILGGTEAEEGSWPWQVSLRLNNAHHCGGSLINNMWILTAAHCFRSNSNPRDWIATSGISTTFPKLRMRVRNILIHNNYKSATHENDIALVRLENSVTFTKDIHSVCLPAATQNIPPGSTAYVTGWGAQEYAGHTVPELRQGQVRIISNDVCNAPHSYNGAILSGMLCAGVPQGGVDACQGDSGGPLVQEDSRRLWFIVGIVSWGDQCGLPDKPGVYTRVTAYLDWIRQQTGI

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CR4_B_3(1P57)
?
[Raw transfer]



N4C_A_2(4JZI)
?
[Raw transfer]



F4D_A_2(4JZ1)
?
[Raw transfer]



1NK_H_3(4JZE)
?
[Raw transfer]



672_B_2(2GV7)

[Raw transfer]



730_B_2(2GV6)

[Raw transfer]



BEN_A_3(1EAX)

[Raw transfer]



BEN_B_2(2OQ5)
TM11E_HUMAN
[Raw transfer]



INH_A_2(3BG8)

[Raw transfer]



BEN_A_6(3P8G)

[Raw transfer]



132_H_3(1O5E)
HEPS_HUMAN
[Raw transfer]



CR9_H_3(1O5F)
?
[Raw transfer]



GOL_A_4(4IS5)

[Raw transfer]



PBZ_D_4(1FIW)
ACRO_SHEEP
[Raw transfer]



APA_A_5(1A0L)
TRYB2_HUMAN
[Raw transfer]



ABV_U_3(3MHW)
?
[Raw transfer]



CHAIN_L_2(2WPH)
?
[Raw transfer]
-
1NB_B_2(1BRU)
CEL2A_PIG
[Raw transfer]



CHAIN_L_2(1Z8G)
?
[Raw transfer]
-
CHAIN_I_2(3P8F)

[Raw transfer]
-
30 HHSearch 87.6150%-110 - C2 -2OQ5 3.1 TM11E_HUMAN
5 PsiBlast_PDB 83.4146%-112 - C2 -1O5F 6.0 ?
2 PsiBlast_PDB 83.1243%-111 - C2 -1Z8G 5.9 ?
6 PsiBlast_PDB 81.1746%-113 - C2 -1P57 4.9 ?
4 PsiBlast_PDB 80.6246%-109 - C2 -1O5E 6.7 HEPS_HUMAN
14 PsiBlast_PDB 80.1339%-107 - C2 -3P8F 10.7
11 PsiBlast_PDB 80.0839%-104 - C2 -4JZ1 6.9 ?
51 HHSearch 79.9543%-102 - C2 -1FIW 3.2 ACRO_SHEEP
8 PsiBlast_PDB 79.7839%-105 - C2 -1EAX 2.8
10 PsiBlast_PDB 79.3339%-107 - C2 -2GV7 6.5
12 PsiBlast_PDB 79.2139%-106 - C2 -4JZI 5.6 ?
13 PsiBlast_PDB 78.7739%-105 - C2 -3P8G 3.3
17 PsiBlast_PDB 77.6339%-105 - C2 -4IS5 2.5
9 PsiBlast_PDB 76.8839%-104 - C2 -2GV6 5.5
53 HHSearch 74.9538%-115 - C2 -1BRU 3.6 CEL2A_PIG
44 HHSearch 74.6437%-100 - C2 -3MHW 2.7 ?
23 Fugue 74.1245%-121 - C2 -1A0L 2.9 TRYB2_HUMAN
7 PsiBlast_PDB 73.6440%-105 - C2 -1EKB - ?
50 HHSearch 71.5435%-102 - C2 -2WPH 4.9 ?
45 HHSearch 71.5437% -99 - C2 -4JZE 6.8 ?
38 HHSearch 70.1141% -98 - C2 -3BG8 4.0