@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_TRY2_B: (2014-08-23 )
MHPLLILAFVGAAVAFPSDDDDKIVGGYTCAENSVPYQVSLNAGYHFCGGSLINDQWVVSAAHCYQYHIQVRLGEYNIDVLEGGEQFIDASKIIRHPKYSSWTLDNDILLIKLSTPAVINARVSTLLLPSACASAGTECLISGWGNTLSSGVNYPDLLQCLVAPLLSHADCEASYPGQITNNMICAGFLEGGKDSCQGDSGGPVACNGQLQGIVSWGYGCAQKGKPGVYTKVCNYVDWIQETIAANS

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0IV_A_2(1ZZZ)
TRY1_BOVIN
[Raw transfer]




BAM_X_2(2BY9)
TRY1_BOVIN
[Raw transfer]




BAM_X_2(2BY6)
TRY1_BOVIN
[Raw transfer]




BAM_X_2(2BY5)
TRY1_BOVIN
[Raw transfer]




BAM_X_2(2BY8)
TRY1_BOVIN
[Raw transfer]




BEN_C_3(1ANE)
TRY2_RAT
[Raw transfer]




BEN_A_4(1J14)
TRY2_RAT
[Raw transfer]




BEN_A_3(1AND)
TRY2_RAT
[Raw transfer]




BEN_A_5(1DPO)
TRY2_RAT
[Raw transfer]




BAM_X_2(2BYA)
TRY1_BOVIN
[Raw transfer]




BAM_X_2(2BY7)
TRY1_BOVIN
[Raw transfer]




BEN_A_3(1ANC)
TRY2_RAT
[Raw transfer]




RPR_A_4(1F0U)
TRY1_BOVIN
[Raw transfer]




PR1_A_5(1F0T)
TRY1_BOVIN
[Raw transfer]




BEN_B_6(1TRM)
TRY2_RAT
[Raw transfer]




BEN_A_3(1ANB)
TRY2_RAT
[Raw transfer]




BEN_A_5(1TRM)
TRY2_RAT
[Raw transfer]




BEN_A_3(2TRM)
TRY2_RAT
[Raw transfer]




IMA_A_4(1LQE)
TRY1_BOVIN
[Raw transfer]




ZEN_A_4(1QL9)
TRY2_RAT
[Raw transfer]




EDO_E_6(3FP6)
TRY2_RAT
[Raw transfer]




EDO_E_6(3FP8)
TRY2_RAT
[Raw transfer]




CHAIN_I_2(3FP7)
TRY2_RAT
[Raw transfer]

-

47 PsiBlast_CBE 97.7579%-122 - C1 -1DPO 3.3 TRY2_RAT
24 PsiBlast_CBE 97.1180%-123 - C1 -1AND 3.2 TRY2_RAT
42 PsiBlast_CBE 96.7379%-126 - C1 -1J14 3.0 TRY2_RAT
22 PsiBlast_CBE 96.0180%-122 - C1 -1ANE 3.2 TRY2_RAT
41 PsiBlast_CBE 95.7679%-123 - C1 -1QL9 6.4 TRY2_RAT
34 PsiBlast_CBE 95.6279%-124 - C1 -2TRM 3.1 TRY2_RAT
36 PsiBlast_CBE 95.6179%-120 - C1 -1TRM 3.1 TRY2_RAT
38 PsiBlast_CBE 95.5779%-120 - C1 -1ANB 3.6 TRY2_RAT
29 PsiBlast_CBE 95.2379%-121 - C1 -3FP8 2.2 TRY2_RAT
30 PsiBlast_CBE 95.1679%-122 - C1 -3FP7 3.6 TRY2_RAT
21 PsiBlast_CBE 94.9880%-121 - C1 -3FP6 2.3 TRY2_RAT
35 PsiBlast_CBE 94.8179%-121 - C1 -1TRM 3.2 TRY2_RAT
37 PsiBlast_CBE 94.7579%-120 - C1 -1ANC 3.5 TRY2_RAT
17 PsiBlast_CBE 93.3873%-125 - C1 -1LQE 7.0 TRY1_BOVIN
23 PsiBlast_CBE 93.3174%-121 - C1 -1ZZZ 4.0 TRY1_BOVIN
13 PsiBlast_CBE 93.2273%-124 - C1 -2BY8 3.5 TRY1_BOVIN
16 PsiBlast_CBE 92.9273%-123 - C1 -2BY5 3.5 TRY1_BOVIN
15 PsiBlast_CBE 92.9173%-123 - C1 -2BY6 3.4 TRY1_BOVIN
11 PsiBlast_CBE 92.6473%-123 - C1 -2BYA 3.5 TRY1_BOVIN
14 PsiBlast_CBE 92.6373%-123 - C1 -2BY7 3.4 TRY1_BOVIN
18 PsiBlast_CBE 92.4873%-125 - C1 -1F0U 8.4 TRY1_BOVIN
12 PsiBlast_CBE 92.2073%-123 - C1 -2BY9 3.4 TRY1_BOVIN
19 PsiBlast_CBE 92.0473%-123 - C1 -1F0T 5.4 TRY1_BOVIN