@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00105_MCR_RA: (2014-08-25 )
METKGYHSLPEGLDMERRWSQVSQTLERSSLGPAERTTENNYMEIVNVSCVSGAIPNNSTQGSSKEKHELLPYIQQDNSRSGILPSDIKTELESKELSATVAESMGLYMDSVRDAEYTYDQQNQQGSLSPTKIYQNMEQLVKFYKENGHRSSTLSAMSRPLRSFMPDSAASMNGGALRAIVKSPIICHEKSSSVSSPLNMASSVCSPVGINSMSSSTTSFGSFPVHSPITQGTSLTCSPSVENRGSRSHSPTHASNVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVPLRSSVSSPANLNNSRCSVSSPSNNTNNRSTLSSPTASTVGSIGSPISNAFSYATSGASAGAGAIQDVVPSPDTHEKGAHDVPFPKTEEVEKAISNGVTGPLNIVQYIKSEPDGAFSSSCLGGNSKISPSSPFSVPIKQESSKHSCSGASFKGNPTVNPFPFMDGSYFSFMDDKDYYSLSGILGPPVPGFDGSCEDSAFPVGIKQEPDDGSYYPEASIPSSAIVGVNSGGQSFHYRIGAQGTISLSRSPRDQSFQHLSSFPPVNTLVESWKPHGDLSSRRSDGYPVLEYIPENVSSSTLRSVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGLHEEQPQQPPPPPPQSPEEGTTYIAPTKEPSVNSALVPQLTSITHALTPSPAMILENIEPETVYAGYDNSKPDTAESLLSTLNRLAAKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQLLYFAPDLVFNEEKMHQSAMYELCQGMRQISLQFVRLQLTFEEYSIMKVLLLLSTVPKDGLKSQAAFEEMRTNYIKELRKMVTKCPNSSGQSWQRFYQLTKLLDSMHDLVSDLLEFCFYTFRESQALKVEFPAMLVEIITDQLPKVESGNAKPLYFHRK

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C0R_C_3(2A3I)

[Raw transfer]




1CA_E_5(2ABI)
MCR_HUMAN
[Raw transfer]




AS4_D_4(2AA2)

[Raw transfer]




1CA_D_4(1Y9R)

[Raw transfer]




1CA_C_3(2AA7)

[Raw transfer]




1CA_D_4(2ABI)
MCR_HUMAN
[Raw transfer]




1CA_F_6(2ABI)

[Raw transfer]




1CA_C_3(1Y9R)
MCR_HUMAN
[Raw transfer]




DEX_A_4(3MNP)

[Raw transfer]




DEX_A_5(3GN8)
?
[Raw transfer]




SNL_A_4(2AB2)
MCR_HUMAN
[Raw transfer]




GOL_D_4(2AA7)

[Raw transfer]




1CA_A_4(3RY9)
?
[Raw transfer]




STR_F_6(1YA3)

[Raw transfer]




GOL_A_3(3MNP)

[Raw transfer]




STR_A_3(2AA5)
MCR_HUMAN
[Raw transfer]




STR_D_4(1YA3)
MCR_HUMAN
[Raw transfer]




STR_B_4(2AA5)

[Raw transfer]




LD1_A_2(3VHV)

[Raw transfer]




STR_B_9(4FN9)
?
[Raw transfer]




STR_A_3(2AA6)
MCR_HUMAN
[Raw transfer]




STR_B_4(2AA6)

[Raw transfer]




STR_A_3(4FN9)
?
[Raw transfer]




WFG_A_2(3WFG)

[Raw transfer]




SNL_A_2(3VHU)

[Raw transfer]




MOF_A_6(4E2J)
?
[Raw transfer]




STR_E_5(1YA3)
MCR_HUMAN
[Raw transfer]




DHT_A_3(1T7R)

[Raw transfer]




WFF_A_2(3WFF)

[Raw transfer]




SNL_B_5(2AB2)

[Raw transfer]




NDR_C_3(1SQN)
PRGR_HUMAN
[Raw transfer]




STR_A_3(1A28)
PRGR_HUMAN
[Raw transfer]




LD2_A_3(3VHV)

[Raw transfer]




11 PsiBlast_PDB 97.5592%-116 - C4 -3VHV 8.7
24 PsiBlast_CBE 97.3192%-115 - C4 -2AA6 8.2
3 PsiBlast_PDB 97.0392%-117 - C4 -2AA7 8.6
5 PsiBlast_PDB 96.7092%-113 - C4 -2AA6 8.2 MCR_HUMAN
1 PsiBlast_PDB 96.5392%-118 - C4 -2AA2 8.7
2 PsiBlast_PDB 96.5192%-113 - C4 -2AA5 8.0 MCR_HUMAN
22 PsiBlast_CBE 96.1392%-116 - C4 -2AB2 7.6
7 PsiBlast_PDB 96.0292%-111 - C4 -2AB2 7.2 MCR_HUMAN
21 PsiBlast_CBE 95.8692%-114 - C4 -2AA5 8.0
8 PsiBlast_PDB 95.4491%-109 - C4 -3WFF 7.2
9 PsiBlast_PDB 95.2891%-108 - C4 -3WFG 7.8
72 HHSearch 95.0192%-117 - C4 -3VHU 9.5
12 PsiBlast_PDB 94.5194%-113 - C4 -2A3I 8.9
26 PsiBlast_CBE 92.7693%-120 - C4 -2ABI 8.6 MCR_HUMAN
14 PsiBlast_PDB 92.3893%-123 - C4 -1YA3 7.8 MCR_HUMAN
29 PsiBlast_CBE 92.0293%-115 - C4 -1Y9R 8.6
13 PsiBlast_PDB 91.9693%-119 - C4 -1Y9R 7.8 MCR_HUMAN
10 PsiBlast_PDB 91.9193%-128 - C4 -2ABI 8.7 MCR_HUMAN
27 PsiBlast_CBE 91.8693%-121 - C4 -1YA3 6.8
28 PsiBlast_CBE 91.7193%-124 - C4 -1YA3 7.7 MCR_HUMAN
25 PsiBlast_CBE 91.2793%-119 - C4 -2ABI 8.1
18 PsiBlast_PDB 87.7669%-108 - C4 -3RY9 8.6 ?
17 PsiBlast_PDB 86.9971%-105 - C4 -4FN9 7.8 ?
35 PsiBlast_CBE 86.8371%-107 - C4 -4FN9 7.4 ?
20 PsiBlast_PDB 86.0961%-113 - C4 -4E2J 8.3 ?
75 HHSearch 85.9557%-112 - C4 -3MNP 5.6
19 PsiBlast_PDB 85.2361%-110 - C4 -3GN8 7.3 ?
76 HHSearch 82.1556%-105 - C4 -1SQN 6.4 PRGR_HUMAN
74 HHSearch 81.3550%-101 - C4 -1T7R 7.0
62 Fugue 78.9851% -97 - C4 -1A28 7.1 PRGR_HUMAN