@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00105_STF1_H: (2014-08-26 )
MDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKAQIRANGFKLETGPPMGVPPPPPPAPDYVLPPSLHGPEPKGLAAGPPAGPLGDFGAPALPMAVPGAHGPLAGYLYPAFPGRAIKSEYPEPYASPPQPGLPYGYPEPFSGGPNVPELILQLLQLEPDEDQVRARILGCLQEPTKSRPDQPAAFGLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKDAQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEMLQAKQT

Atome Classification :

(8 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PEF_F_6(1ZDT)
STF1_HUMAN
[Raw transfer]




P3A_D_4(1ZDU)

[Raw transfer]




P0E_C_3(1YOW)
STF1_HUMAN
[Raw transfer]




EPH_E_5(1YUC)
NR5A2_HUMAN
[Raw transfer]




PEF_C_3(1YP0)
STF1_MOUSE
[Raw transfer]




P6L_D_4(1YOK)

[Raw transfer]




PLC_A_6(4DOS)

[Raw transfer]




470_A_5(3PLZ)
NR5A2_HUMAN
[Raw transfer]




CHAIN_Q_3(1ZDU)

[Raw transfer]

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17 PsiBlast_CBE 96.8599%-156 - C1 -1ZDT 11.2 STF1_HUMAN
1 PsiBlast_PDB 96.1199%-161 - C1 -1YOW 10.2 STF1_HUMAN
2 PsiBlast_PDB 89.2693%-150 - C1 -1YP0 10.7 STF1_MOUSE
8 PsiBlast_PDB 87.5859%-153 - C1 -4DOS 7.7
7 PsiBlast_PDB 86.2360%-156 - C1 -3PLZ 7.6 NR5A2_HUMAN
3 PsiBlast_PDB 85.7059%-154 - C1 -1YUC 9.3 NR5A2_HUMAN
6 PsiBlast_PDB 85.3560%-158 - C1 -1YOK 9.1
5 PsiBlast_PDB 84.0660%-158 - C1 -1ZDU 10.4