@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00112_CATH_R: (2014-08-27 )
MWTALPLLCAGAWLLSAGATAELTVNAIEKFHFTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAACASYPIPQV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FSP_A_6(1TU6)
CATK_HUMAN
[Raw transfer]




NBL_B_2(1YK7)
CATK_HUMAN
[Raw transfer]




2CA_A_3(1NLJ)
CATK_HUMAN
[Raw transfer]




IHE_A_2(1U9V)
CATK_HUMAN
[Raw transfer]




750_A_3(1NL6)
CATK_HUMAN
[Raw transfer]




IHI_A_2(1U9W)
CATK_HUMAN
[Raw transfer]




MYP_A_3(1M6D)
CATF_HUMAN
[Raw transfer]




IHJ_A_2(1U9X)
CATK_HUMAN
[Raw transfer]




CKE_A_2(2R6N)
CATK_HUMAN
[Raw transfer]




TCO_A_3(1Q6K)
CATK_HUMAN
[Raw transfer]




KWZ_A_8(3KWZ)
CATK_HUMAN
[Raw transfer]




BNS_B_3(1MEM)
CATK_HUMAN
[Raw transfer]




BZP_B_2(1MEM)
CATK_HUMAN
[Raw transfer]




SUGAR_A_3(8PCH)
CATH_PIG
[Raw transfer]

-

CHAIN_P_2(8PCH)
CATH_PIG
[Raw transfer]

-

CHAIN_S_8(1NB3)
CATH_PIG
[Raw transfer]

-

CHAIN_C_3(1S4V)
CYSEP_RICCO
[Raw transfer]

-

CHAIN_R_5(1NB5)
?
[Raw transfer]

-

CHAIN_P_2(1NB5)
?
[Raw transfer]

-

CHAIN_T_11(1NB5)
?
[Raw transfer]

-

CHAIN_R_5(1NB3)
CATH_PIG
[Raw transfer]

-

CHAIN_P_2(1NB3)
CATH_PIG
[Raw transfer]

-

CHAIN_T_11(1NB3)
CATH_PIG
[Raw transfer]

-

CHAIN_S_8(1NB5)
?
[Raw transfer]

-

26 PsiBlast_CBE 88.5185% -99 - C2 -1NB3 1.8 CATH_PIG
1 PsiBlast_PDB 87.8285%-100 - C2 -8PCH 3.4 CATH_PIG
25 PsiBlast_CBE 87.6085% -97 - C2 -1NB3 2.4 CATH_PIG
21 PsiBlast_CBE 87.4185%-100 - C2 -1NB5 3.6 ?
24 PsiBlast_CBE 87.1085% -94 - C2 -1NB3 1.5 CATH_PIG
3 PsiBlast_PDB 86.8685% -93 - C2 -1NB5 2.4 ?
22 PsiBlast_CBE 86.7885% -96 - C2 -1NB5 2.3 ?
2 PsiBlast_PDB 86.7185% -95 - C2 -1NB3 2.2 CATH_PIG
23 PsiBlast_CBE 86.6885%-100 - C2 -1NB5 2.2 ?
50 HHSearch 73.8950% -94 - C2 -3KWZ 3.6 CATK_HUMAN
12 PsiBlast_PDB 72.9249% -90 - C2 -1U9W 4.0 CATK_HUMAN
13 PsiBlast_PDB 72.9049% -89 - C2 -1U9X 4.6 CATK_HUMAN
14 PsiBlast_PDB 72.8649% -92 - C2 -2R6N 5.4 CATK_HUMAN
19 PsiBlast_PDB 72.6849% -92 - C2 -1TU6 5.4 CATK_HUMAN
18 PsiBlast_PDB 72.5349% -92 - C2 -1Q6K 3.7 CATK_HUMAN
20 PsiBlast_PDB 72.4649% -90 - C2 -1YK7 3.7 CATK_HUMAN
15 PsiBlast_PDB 72.2849% -93 - C2 -1MEM 4.6 CATK_HUMAN
17 PsiBlast_PDB 72.1849% -89 - C2 -1NLJ 3.7 CATK_HUMAN
11 PsiBlast_PDB 71.9049% -90 - C2 -1U9V 3.6 CATK_HUMAN
16 PsiBlast_PDB 71.7049% -91 - C2 -1NL6 4.8 CATK_HUMAN
61 HHSearch 70.7747% -86 - C2 -1S4V 3.7 CYSEP_RICCO
56 HHSearch 67.7938% -93 - C2 -1M6D 5.3 CATF_HUMAN