@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00112_CATL2_: (2014-08-27 )
MNLSLVLAAFCLGIASAVPKFDQNLDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0IW_B_5(1FH0)
CATL2_HUMAN
[Raw transfer]



0IW_A_3(1FH0)
CATL2_HUMAN
[Raw transfer]



NSY_A_7(3H8B)
CATL1_HUMAN
[Raw transfer]



I0X_A_2(3OF9)
CATL1_HUMAN
[Raw transfer]



NSX_A_7(3H89)
CATL1_HUMAN
[Raw transfer]



NOW_B_8(3HHA)
CATL1_HUMAN
[Raw transfer]



NOW_A_5(3HHA)
CATL1_HUMAN
[Raw transfer]



NOW_D_11(3HHA)
CATL1_HUMAN
[Raw transfer]



BD3_C_7(3HWN)
?
[Raw transfer]



I0Y_A_2(3OF8)
CATL1_HUMAN
[Raw transfer]



XU5_A_2(2XU5)
CATL1_HUMAN
[Raw transfer]



BD3_B_6(3HWN)
CATL1_HUMAN
[Raw transfer]



424_C_7(2XU1)
?
[Raw transfer]



424_B_6(2XU1)
CATL1_HUMAN
[Raw transfer]



GOL_A_4(3IV2)
CATL1_HUMAN
[Raw transfer]



GOL_A_5(3IV2)
CATL1_HUMAN
[Raw transfer]



424_A_5(2XU1)
?
[Raw transfer]



BD3_D_8(3HWN)
?
[Raw transfer]



GOL_B_11(3IV2)
CATL1_HUMAN
[Raw transfer]



MYP_A_3(1M6D)
CATF_HUMAN
[Raw transfer]



KWZ_A_8(3KWZ)
CATK_HUMAN
[Raw transfer]



PG4_A_14(3QT4)
?
[Raw transfer]



PGE_B_9(3HHA)
CATL1_HUMAN
[Raw transfer]



CHAIN_D_4(3K24)
CATL1_HUMAN
[Raw transfer]
-
PG4_A_6(3HHA)
CATL1_HUMAN
[Raw transfer]



CHAIN_C_3(3K24)
CATL1_HUMAN
[Raw transfer]
-
CHAIN_C_3(1S4V)
CYSEP_RICCO
[Raw transfer]
-
21 PsiBlast_CBE 90.5799% -81 - C5 -1FH0 7.2 CATL2_HUMAN
3 PsiBlast_PDB 90.0499% -84 - C5 -1FH0 7.2 CATL2_HUMAN
58 HHSearch 85.3543% -63 - C5 -3QT4 2.6 ?
9 PsiBlast_PDB 84.2679% -87 - C5 -3H8B 8.0 CATL1_HUMAN
8 PsiBlast_PDB 84.0379% -87 - C5 -3H89 8.4 CATL1_HUMAN
7 PsiBlast_PDB 83.9878% -80 - C5 -3OF9 5.8 CATL1_HUMAN
25 PsiBlast_CBE 83.9577% -87 - C5 -3HWN 3.6 ?
46 PsiBlast_CBE 83.9479% -79 - C5 -2XU1 5.8 CATL1_HUMAN
44 PsiBlast_CBE 83.8679% -84 - C5 -3HHA 4.2 CATL1_HUMAN
6 PsiBlast_PDB 83.5678% -79 - C5 -3OF8 5.5 CATL1_HUMAN
45 PsiBlast_CBE 83.5379% -82 - C5 -2XU1 4.6 ?
13 PsiBlast_PDB 83.4179% -80 - C5 -3HHA 4.5 CATL1_HUMAN
47 PsiBlast_CBE 83.3979% -82 - C5 -3K24 2.8 CATL1_HUMAN
14 PsiBlast_PDB 83.3079% -79 - C5 -2XU1 5.9 ?
26 PsiBlast_CBE 83.1277% -80 - C5 -3HWN 6.2 ?
43 PsiBlast_CBE 83.1079% -82 - C5 -3HHA 4.3 CATL1_HUMAN
10 PsiBlast_PDB 82.4779% -80 - C5 -2XU5 5.5 CATL1_HUMAN
17 PsiBlast_PDB 82.2279% -77 - C5 -3K24 3.1 CATL1_HUMAN
27 PsiBlast_CBE 82.2177% -83 - C5 -3HWN 6.0 CATL1_HUMAN
48 PsiBlast_CBE 81.2079% -72 - C5 -3IV2 2.5 CATL1_HUMAN
16 PsiBlast_PDB 81.0679% -70 - C5 -3IV2 2.1 CATL1_HUMAN
68 HHSearch 75.4859% -78 * C5 *3KWZ 3.8 CATK_HUMAN
80 HHSearch 75.2154% -72 - C5 -1S4V 3.6 CYSEP_RICCO
78 HHSearch 71.8043% -73 - C5 -1M6D 5.1 CATF_HUMAN