@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00112_LMCPB_: (2014-08-28 )
MATSRAALCAVAVVCVVLAAACAPARAIHVGTPAAALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNACLLSEYPVSAHVRESAAPGTSTSSETPAPRPVMVEQVICFDKNCTQGCRKTLIKANECHKNGGGGASMIKCSPQKVTMCTYSNEFCVGGGLCFETPDGKCAPYFLGSIMNTCHYT

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VS1_A_4(1F29)
CYSP_TRYCR
[Raw transfer]




VS3_A_2(1F2B)
CYSP_TRYCR
[Raw transfer]




VSC_A_2(1EWO)
CYSP_TRYCR
[Raw transfer]




VS2_A_2(1F2A)
CYSP_TRYCR
[Raw transfer]




VS4_A_2(1F2C)
CYSP_TRYCR
[Raw transfer]




P10_A_2(1ME3)
CYSP_TRYCR
[Raw transfer]




D1R_A_11(2OZ2)
CYSP_TRYCR
[Raw transfer]




T10_A_2(1ME4)
CYSP_TRYCR
[Raw transfer]




4MC_A_3(3LXS)
CYSP_TRYCR
[Raw transfer]




186_B_2(1U9Q)
CYSP_TRYCR
[Raw transfer]




25B_A_3(3HD3)
CYSP_TRYCR
[Raw transfer]




KB2_A_2(3IUT)
CYSP_TRYCR
[Raw transfer]




1RV_A_6(4KLB)
CYSP_TRYCR
[Raw transfer]




CHAIN_B_2(1EWP)
CYSP_TRYCR
[Raw transfer]

-

D1R_C_12(2OZ2)
CYSP_TRYCR
[Raw transfer]




4MC_C_13(3LXS)
CYSP_TRYCR
[Raw transfer]




7 PsiBlast_PDB 89.7960%-113 - C2 -1ME4 5.7 CYSP_TRYCR
1 PsiBlast_PDB 89.2760%-112 - C2 -1EWP 3.6 CYSP_TRYCR
6 PsiBlast_PDB 89.2460%-110 - C2 -1ME3 5.5 CYSP_TRYCR
17 PsiBlast_PDB 89.1259%-110 - C2 -3IUT 5.4 CYSP_TRYCR
18 PsiBlast_PDB 89.0659%-109 - C2 -3HD3 5.9 CYSP_TRYCR
3 PsiBlast_PDB 88.7660%-109 - C2 -1F2A 6.8 CYSP_TRYCR
2 PsiBlast_PDB 88.7560%-109 - C2 -1F29 6.5 CYSP_TRYCR
15 PsiBlast_PDB 88.2260%-109 - C2 -3LXS 5.9 CYSP_TRYCR
10 PsiBlast_PDB 88.0760%-109 - C2 -1EWO 5.8 CYSP_TRYCR
11 PsiBlast_PDB 87.9060%-111 - C2 -1U9Q 5.6 CYSP_TRYCR
4 PsiBlast_PDB 87.8960%-108 - C2 -1F2B 7.7 CYSP_TRYCR
16 PsiBlast_PDB 87.6060%-108 - C2 -4KLB 3.8 CYSP_TRYCR
5 PsiBlast_PDB 87.0660%-111 - C2 -1F2C 6.4 CYSP_TRYCR
12 PsiBlast_PDB 86.8960%-109 - C2 -2OZ2 7.3 CYSP_TRYCR