@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00194_CAH5B_: (2014-08-31 )
MVVMNSLRVILQASPGKLLWRKFQIPRFMPARPCSLYTCTYKTRNRALHPLWESVDLVPGGDRQSPINIRWRDSVYDPGLKPLTISYDPATCLHVWNNGYSFLVEFEDSTDKSVIKGGPLEHNYRLKQFHFHWGAIDAWGSEHTVDSKCFPAELHLVHWNAVRFENFEDAALEENGLAVIGVFLKLGKHHKELQKLVDTLPSIKHKDALVEFGSFDPSCLMPTCPDYWTYSGSLTTPPLSESVTWIIKKQPVEVDHDQLEQFRTLLFTSEGEKEKRMVDNFRPLQPLMNRTVRSSFRHDYVLNVQAKPKPATSQATP

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

D8W_A_3(3DBU)
CAH2_HUMAN
[Raw transfer]




MZM_A_3(3DCS)
CAH2_HUMAN
[Raw transfer]




B30_A_5(2FOY)
CAH1_HUMAN
[Raw transfer]




AZM_A_3(3ML5)
CAH7_HUMAN
[Raw transfer]




D9Z_A_3(3DCC)
CAH2_HUMAN
[Raw transfer]




AZM_A_5(1DMY)
CAH5A_MOUSE
[Raw transfer]




EZL_A_3(3DCW)
CAH2_HUMAN
[Raw transfer]




VZ5_A_3(3OIL)
CAH2_HUMAN
[Raw transfer]




SUA_A_4(3K34)
CAH2_HUMAN
[Raw transfer]




AZM_A_3(3DC3)
CAH2_HUMAN
[Raw transfer]




WZB_A_3(3OIK)
CAH2_HUMAN
[Raw transfer]




VZ4_A_3(3OKV)
CAH2_HUMAN
[Raw transfer]




AZM_A_3(4LU3)
CAH14_HUMAN
[Raw transfer]




AZM_A_4(4G7A)
?
[Raw transfer]




E1F_B_4(4KNN)
CAH13_HUMAN
[Raw transfer]




ETS_A_4(3FW3)
CAH4_HUMAN
[Raw transfer]




AZM_A_6(3IAI)
CAH9_HUMAN
[Raw transfer]




AZM_A_5(1JD0)
CAH12_HUMAN
[Raw transfer]




GOL_A_7(3K34)
CAH2_HUMAN
[Raw transfer]




GOL_A_4(3OIK)
CAH2_HUMAN
[Raw transfer]




TU0_A_3(4BCW)
CAH2_HUMAN
[Raw transfer]




ACY_A_11(1KEQ)
CAH5A_MOUSE
[Raw transfer]




ACY_A_8(1Y7W)
?
[Raw transfer]




4MZ_A_6(1KEQ)
CAH5A_MOUSE
[Raw transfer]




4MZ_A_6(1KEQ)
CAH5A_MOUSE
[Raw transfer]




VZ4_A_4(3OKV)
CAH2_HUMAN
[Raw transfer]




PEG_A_7(4HT2)
CAH12_HUMAN
[Raw transfer]




EDO_A_8(4HT2)
CAH12_HUMAN
[Raw transfer]




3 PsiBlast_PDB 95.4567% -89 - C2 -1DMY 2.9 CAH5A_MOUSE
35 HHSearch 95.0167% -91 - C2 -1KEQ 2.6 CAH5A_MOUSE
11 PsiBlast_PDB 93.7456% -93 - C2 -3DC3 3.1 CAH2_HUMAN
10 PsiBlast_PDB 93.5156% -91 - C2 -3DBU 3.7 CAH2_HUMAN
9 PsiBlast_PDB 93.5056% -89 - C2 -4BCW 3.6 CAH2_HUMAN
34 HHSearch 93.4354% -80 - C2 -3K34 4.1 CAH2_HUMAN
13 PsiBlast_PDB 93.3656% -90 - C2 -3DCC 4.3 CAH2_HUMAN
16 PsiBlast_PDB 93.1156% -88 - C2 -3OIK 5.8 CAH2_HUMAN
18 PsiBlast_PDB 92.8256% -88 - C2 -3OKV 5.7 CAH2_HUMAN
14 PsiBlast_PDB 92.4856% -90 - C2 -3DCS 3.1 CAH2_HUMAN
32 HHSearch 92.3751% -78 - C2 -3ML5 3.4 CAH7_HUMAN
15 PsiBlast_PDB 91.9356% -87 - C2 -3DCW 4.0 CAH2_HUMAN
17 PsiBlast_PDB 91.8356% -88 - C2 -3OIL 5.7 CAH2_HUMAN
30 HHSearch 90.9249% -69 - C2 -4KNN 4.4 CAH13_HUMAN
31 HHSearch 88.6348% -75 * C2 *2FOY 4.0 CAH1_HUMAN
38 HHSearch 83.1932% -82 - C2 -4HT2 2.2 CAH12_HUMAN
39 HHSearch 81.1433% -81 - C2 -4LU3 3.3 CAH14_HUMAN
21 Fugue 80.9430% -79 - C2 -1JD0 3.8 CAH12_HUMAN
41 HHSearch 80.6134% -91 - C2 -3IAI 2.8 CAH9_HUMAN
36 HHSearch 78.1833% -82 - C2 -3FW3 3.7 CAH4_HUMAN
46 HHSearch 72.4133% -96 - C2 -4G7A 3.0 ?