@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00351_PH4H_R: (2014-09-05 )
MAAVVLENGVLSRKLSDFGQETSYIEDNSNQNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSIIKSLRNDIGATVHELSRDKEKNTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYTEEEKQTWGTVFRTLKALYKTHACYEHNHIFPLLEKYCGFREDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKEGDSIKAYGAGLLSSFGELQYCLSDKPKLLPLELEKTACQEYSVTEFQPLYYVAESFSDAKEKVRTFAATIPRPFSVRYDPYTQRVEVLDNTQQLKILADSINSEVGILCNALQKIKS

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

H4B_A_4(1MMT)
PH4H_HUMAN
[Raw transfer]




H4B_A_4(1MMK)
PH4H_HUMAN
[Raw transfer]




H4B_A_3(1KW0)
PH4H_HUMAN
[Raw transfer]




H2B_A_3(1TG2)
PH4H_HUMAN
[Raw transfer]




ALE_A_3(3PAH)
PH4H_HUMAN
[Raw transfer]




NLE_A_5(1MMT)
PH4H_HUMAN
[Raw transfer]




H4B_A_3(1J8U)
PH4H_HUMAN
[Raw transfer]




LNR_A_3(4PAH)
PH4H_HUMAN
[Raw transfer]




HBI_A_3(1LRM)
PH4H_HUMAN
[Raw transfer]




H4B_A_3(1J8U)
PH4H_HUMAN
[Raw transfer]




DAH_A_3(6PAH)
PH4H_HUMAN
[Raw transfer]




LDP_A_3(5PAH)
PH4H_HUMAN
[Raw transfer]




HBI_A_3(1MLW)
TPH1_HUMAN
[Raw transfer]




HBI_A_3(1DMW)
PH4H_HUMAN
[Raw transfer]




PEG_A_5(4BPT)
?
[Raw transfer]




3QI_A_3(4ANP)
PH4H_HUMAN
[Raw transfer]




TIH_A_5(1MMK)
PH4H_HUMAN
[Raw transfer]




TIH_A_4(1KW0)
PH4H_HUMAN
[Raw transfer]




PEG_A_6(4BPT)
?
[Raw transfer]




12 PsiBlast_PDB 84.7095%-110 - C1 -3PAH 3.7 PH4H_HUMAN
17 PsiBlast_PDB 84.6995%-108 - C1 -1TG2 4.8 PH4H_HUMAN
15 PsiBlast_PDB 84.6795%-113 - C1 -6PAH 3.8 PH4H_HUMAN
13 PsiBlast_PDB 84.3095%-108 - C1 -4PAH 3.7 PH4H_HUMAN
14 PsiBlast_PDB 84.2795%-112 - C1 -5PAH 3.8 PH4H_HUMAN
33 HHSearch 84.0695%-110 - C1 -1J8U 4.6 PH4H_HUMAN
18 PsiBlast_PDB 83.7795%-111 - C1 -1DMW 4.3 PH4H_HUMAN
6 PsiBlast_PDB 83.7295%-110 - C1 -1LRM 4.3 PH4H_HUMAN
10 PsiBlast_PDB 83.4695%-105 - C1 -4ANP 5.9 PH4H_HUMAN
8 PsiBlast_PDB 82.5295%-104 - C1 -1MMK 5.2 PH4H_HUMAN
9 PsiBlast_PDB 81.8395%-105 - C1 -1MMT 5.0 PH4H_HUMAN
7 PsiBlast_PDB 81.6095%-106 - C1 -1KW0 5.0 PH4H_HUMAN
34 HHSearch 72.4666%-105 - C1 -1MLW 4.2 TPH1_HUMAN
36 HHSearch 54.0835%-108 - C1 -4BPT 2.6 ?