@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00536_EPHB1_: (2014-09-11 )
MALDYLLLLLLASAVAAMEETLMDTRTATAELGWTANPASGWEEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNVPGSCKETFNLYYYETDSVIATKKSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEVRSFGPLTRNGFYLAFQDYGACMSLLSVRVFFKKCPSIVQNFAVFPETMTGAESTSLVIARGTCIPNAEEVDVPIKLYCNGDGEWMVPIGRCTCKPGYEPENSVACKACPAGTFKASQEAEGCSHCPSNSRSPAEASPICTCRTGYYRADFDPPEVACTSVPSGPRNVISIVNETSIILEWHPPRETGGRDDVTYNIICKKCRADRRSCSRCDDNVEFVPRQLGLTECRVSISSLWAHTPYTFDIQAINGVSSKSPFPPQHVSVNITTNQAAPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDDDYKSELREQLPLIAGSAAAGVVFVVSLVAISIVCSRKRAYSKEAVYSDKLQHYSTGRGSPGMKIYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPMDCPAALHQLMLDCWQKDRNSRPRFAEIVNTLDKMIRNPASLKTVATITAVPSQPLLDRSIPDFTAFTTVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGITLAGHQKKILNSIHSMRVQISQSPTAMA

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

32W_A_2(4BB4)

[Raw transfer]




7X6_A_2(2VWZ)

[Raw transfer]




AS6_A_2(2XVD)

[Raw transfer]




7X5_A_2(2VWY)

[Raw transfer]




7X8_A_2(2VX1)

[Raw transfer]




7X4_A_2(2VWX)

[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




IHZ_A_2(3DKO)

[Raw transfer]




7X7_A_2(2VX0)

[Raw transfer]




GOL_A_3(2Y6M)

[Raw transfer]




X9F_A_2(2X9F)

[Raw transfer]




1N1_A_2(2Y6O)

[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




ANP_A_3(2OZO)
ZAP70_HUMAN
[Raw transfer]




Q9G_A_8(2XYU)

[Raw transfer]




ADP_D_12(2HEN)

[Raw transfer]




ADP_C_11(2HEN)
EPHB2_MOUSE
[Raw transfer]




ADP_B_10(2HEN)
EPHB2_MOUSE
[Raw transfer]




STU_A_2(1U59)

[Raw transfer]




STU_A_3(2YN8)
EPHB4_HUMAN
[Raw transfer]




ANP_A_3(2QO9)

[Raw transfer]




STU_B_4(2YN8)

[Raw transfer]




ADP_A_9(2HEN)
EPHB2_MOUSE
[Raw transfer]




ANP_A_3(3KEX)
ERBB3_HUMAN
[Raw transfer]




30K_A_2(4AW5)

[Raw transfer]




STU_A_3(3CBL)

[Raw transfer]




STU_A_5(3CD3)

[Raw transfer]




PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]




ANP_D_4(1JPA)

[Raw transfer]




03P_A_5(3POZ)

[Raw transfer]




ANP_C_3(1JPA)
EPHB2_MOUSE
[Raw transfer]




CHAIN_B_2(3CBL)

[Raw transfer]

-

CHAIN_B_2(3CD3)

[Raw transfer]

-

21 PsiBlast_CBE 72.5187%-110 - C1 -1JPA 4.2
11 PsiBlast_PDB 72.4385%-109 - C1 -2VWX 6.4
2 PsiBlast_PDB 72.3187%-109 - C1 -1JPA 4.1 EPHB2_MOUSE
15 PsiBlast_PDB 72.2885%-111 - C1 -2VX1 7.3
18 PsiBlast_PDB 71.9285%-113 - C1 -4BB4 6.8
13 PsiBlast_PDB 71.8885%-106 - C1 -2VWZ 7.6
14 PsiBlast_PDB 71.7785%-108 - C1 -2VX0 7.3
12 PsiBlast_PDB 71.7185%-107 - C1 -2VWY 6.9
16 PsiBlast_PDB 71.6385%-110 - C1 -2X9F 6.6
17 PsiBlast_PDB 70.9285%-108 - C1 -2XVD 6.9
33 PsiBlast_CBE 69.9181%-113 - C1 -2Y6M 2.6
28 PsiBlast_CBE 69.8786%-110 - C1 -4AW5 7.5
32 PsiBlast_CBE 69.8281%-116 - C1 -2Y6O 7.4
29 PsiBlast_CBE 69.7579%-108 - C1 -3DKO 8.4
22 PsiBlast_CBE 69.4887%-115 - C1 -2YN8 8.4
34 PsiBlast_CBE 69.2780%-118 - C1 -2XYU 7.0
25 PsiBlast_CBE 69.0287%-108 - C1 -2HEN 5.0 EPHB2_MOUSE
24 PsiBlast_CBE 68.9687%-110 - C1 -2HEN 5.6
27 PsiBlast_CBE 68.9387%-110 - C1 -2HEN 4.8 EPHB2_MOUSE
26 PsiBlast_CBE 68.5187%-109 - C1 -2HEN 5.3 EPHB2_MOUSE
23 PsiBlast_CBE 68.0887%-116 - C1 -2YN8 8.4 EPHB4_HUMAN
20 PsiBlast_PDB 67.7268%-109 - C1 -2QO9 3.9
58 HHSearch 64.6568%-109 - C1 -3KUL 3.0 EPHA8_HUMAN
35 PsiBlast_CBE 64.4471%-110 - C1 -1MQB 4.2
36 PsiBlast_CBE 63.2471%-109 - C1 -1MQB 4.3 EPHA2_HUMAN
69 HHSearch 54.5640%-106 - C1 -2OZO 5.6 ZAP70_HUMAN
41 Fugue 54.4133% -75 - C1 -3CD3 8.8
60 HHSearch 53.5642% -92 - C1 -3CBL 8.7
62 HHSearch 51.4338%-101 - C1 -3POZ 10.6
68 HHSearch 51.3941%-101 - C1 -1U59 5.8
64 HHSearch 51.3043%-101 - C1 -1QCF 6.5 HCK_HUMAN
65 HHSearch 47.1033% -88 - C1 -3KEX 5.1 ERBB3_HUMAN