@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00648_CAN1_R: (2014-09-13 )
MAEELITPVYCTGVSAQVQKQRDKELGLGRHENAIKYLGQDYENLRARCLQNGVLFQDDAFPPVSHSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAAIASLTLNETILHRVVPYGQSFQEGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHSAQGNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKAPSDLYQIILKALERGSLLGCSINISDIRDLEAITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKSRTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDADDYDSRESGCSFLLALMQKHRRRERRFGRDMETIGFAVYQVPRELAGQPVHLKRDFFLANASRAQSEHFINLREVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLNKKLHELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKILDTDLDGVVTFDLFKWLQLTMFA

Atome Classification :

(13 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GRD_A_7(2R9C)
CAN1_RAT
[Raw transfer]



K2Z_A_7(2R9F)
CAN1_RAT
[Raw transfer]



K2Z_A_7(2R9F)
CAN1_RAT
[Raw transfer]



E64_A_4(1TLO)
CAN1_RAT
[Raw transfer]



D7G_A_4(2G8J)
CAN1_RAT
[Raw transfer]



NQG_A_4(2NQG)
CAN1_RAT
[Raw transfer]



NQI_A_4(2NQI)
CAN1_RAT
[Raw transfer]



0M6_A_4(2G8E)
CAN1_RAT
[Raw transfer]



C1N_A_4(1ZCM)
CAN1_HUMAN
[Raw transfer]



BME_B_8(2ARY)
CAN1_HUMAN
[Raw transfer]



MES_A_5(2G8E)
CAN1_RAT
[Raw transfer]



BME_A_4(1ZIV)
CAN9_HUMAN
[Raw transfer]



BME_A_4(1ZIV)
CAN9_HUMAN
[Raw transfer]



CHAIN_D_3(2P0R)
CAN9_HUMAN
[Raw transfer]
-
CHAIN_B_2(1TL9)
CAN1_RAT
[Raw transfer]
-
CHAIN_D_3(2NQA)
CAN2_HUMAN
[Raw transfer]
-
4 PsiBlast_PDB 60.4199% -86 - C1 -1TLO 2.8 CAN1_RAT
32 HHSearch 60.1699% -86 - C1 -2R9F 5.8 CAN1_RAT
7 PsiBlast_PDB 60.1499% -87 - C1 -2NQG 3.9 CAN1_RAT
6 PsiBlast_PDB 59.5199% -84 - C1 -2G8J 4.2 CAN1_RAT
5 PsiBlast_PDB 59.3899% -82 - C1 -2G8E 3.3 CAN1_RAT
3 PsiBlast_PDB 59.3799% -83 - C1 -1TL9 4.9 CAN1_RAT
9 PsiBlast_PDB 59.3299% -84 - C1 -2R9C 6.7 CAN1_RAT
8 PsiBlast_PDB 59.1099% -85 - C1 -2NQI 2.4 CAN1_RAT
22 PsiBlast_CBE 58.0387% -87 - C1 -2ARY 2.6 CAN1_HUMAN
13 PsiBlast_PDB 57.3487% -83 - C1 -1ZCM 3.5 CAN1_HUMAN
33 HHSearch 52.4467% -84 - C1 -2NQA 3.7 CAN2_HUMAN
16 PsiBlast_PDB 49.3859% -79 - C1 -2P0R 3.9 CAN9_HUMAN
34 HHSearch 47.5559% -89 - C1 -1ZIV 2.7 CAN9_HUMAN