@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00659_PLK1_X: (2014-09-14 )
MAQVAGKKLTVAPEAAKPPGIPGSSSAVKEIPEILVDPRTRRRYLRGRFLGKGGFAKCYEITDLESREVFAGKIVPKTMLLKPHQKDKMTMEIAIQRSLDHRHVVGFHGFFEDNDFVYVVLELCRRRSLLELHKRRKAVTEPEARYYLKQTISGCQYLHSNRVIHRDLKLGNLFLNDEMEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLGKKGHSFEVDIWSIGCIMYTLLVGKPPFETSCLKETYMRIKKNEYSIPKHINPVAAALIQKMLRSDPTSRPTIDDLLNDEFFTSGYIPSRLPTTCLTVPPRFSIAPSTIDQSLRKPLTAINKGQDSPLVEKQVAPAKEEEMQQPEFTEPADCYLSEMLQQLTCLNAVKPSERALIRQEEAEDPASIPIFWISKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLIMYNDGDSLQYIERNNTESYLNVRSYPTTLTKKITLLKYFRNYMSEHLLKAGANTTPREGDELARLPFLRTWFRTRSAIILHLSNGTVQINFFQDHTKIILCPLMAAVSYIDEKREFRTYKLSLIQEFGCCKELASRLRYARTMVEKLQSSKSAVAHVKASA

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

R78_A_3(2RKU)
PLK1_HUMAN
[Raw transfer]



2FR_A_2(3DBC)
?
[Raw transfer]



GOL_A_11(3FC2)
PLK1_HUMAN
[Raw transfer]



4FR_A_2(3DBE)
?
[Raw transfer]



1J3_A_2(4J52)
PLK1_HUMAN
[Raw transfer]



5FR_A_2(3DBF)
?
[Raw transfer]



IBI_A_2(3FC2)
PLK1_HUMAN
[Raw transfer]



626_A_5(2OWB)
PLK1_HUMAN
[Raw transfer]



1J4_A_4(4J53)
PLK1_HUMAN
[Raw transfer]



FRS_A_2(3DB6)
?
[Raw transfer]



3FR_A_2(3DBD)
?
[Raw transfer]



ADP_A_2(3D5W)
?
[Raw transfer]



9ZP_A_2(4B6L)
PLK3_HUMAN
[Raw transfer]



1FR_A_2(3DB8)
?
[Raw transfer]



1D1_A_2(4I5P)
PLK2_HUMAN
[Raw transfer]



ANP_A_7(2OU7)
PLK1_HUMAN
[Raw transfer]



KWT_A_2(3D5X)
?
[Raw transfer]



TAR_A_8(2RKU)
PLK1_HUMAN
[Raw transfer]



EDO_A_3(3FC2)
PLK1_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
11 PsiBlast_PDB 92.0486%-112 - C1 -4J53 9.2 PLK1_HUMAN
6 PsiBlast_PDB 91.7184%-115 - C1 -2OU7 3.5 PLK1_HUMAN
12 PsiBlast_PDB 91.6686%-113 - C1 -2RKU 9.8 PLK1_HUMAN
7 PsiBlast_PDB 91.2784%-116 - C1 -2OWB 8.2 PLK1_HUMAN
8 PsiBlast_PDB 90.8784%-114 - C1 -3FC2 8.4 PLK1_HUMAN
10 PsiBlast_PDB 90.6986%-115 - C1 -4J52 9.8 PLK1_HUMAN
13 PsiBlast_PDB 90.2278%-111 - C1 -3D5W 5.3 ?
19 PsiBlast_PDB 88.5780%-113 - C1 -3D5X 4.2 ?
18 PsiBlast_PDB 88.4180%-114 - C1 -3DB6 8.1 ?
20 PsiBlast_PDB 85.1280%-110 - C1 -3DBE 7.5 ?
17 PsiBlast_PDB 84.1678%-120 - C1 -3DBD 8.5 ?
21 PsiBlast_CBE 84.1080%-118 - C1 -3DBF 8.0 ?
15 PsiBlast_PDB 83.7078%-121 - C1 -3DB8 7.6 ?
16 PsiBlast_PDB 82.0578%-119 - C1 -3DBC 7.5 ?
71 HHSearch 72.2651%-105 - C1 -4I5P 6.8 PLK2_HUMAN
70 HHSearch 68.8253% -99 - C1 -4B6L 10.4 PLK3_HUMAN