@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01327_DEF1A_: (2014-09-22 )
MGLHRDEATAMETLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNLPTSSSSSLSTKAGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMVPRTFRTVDNLDLPLAEGCPKLGPQ

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BB2_A_3(4JE7)
?
[Raw transfer]



BB2_A_2(3PN4)
DEF1B_ARATH
[Raw transfer]



BB2_B_5(4JE7)
?
[Raw transfer]



BB2_A_5(3G5K)
DEFM_HUMAN
[Raw transfer]



BB2_A_5(3UWB)
?
[Raw transfer]



NVC_A_3(3E3U)
DEF_MYCTU
[Raw transfer]



BB2_A_5(3U04)
?
[Raw transfer]



BB2_A_7(1G2A)
DEF_ECOLI
[Raw transfer]



BB2_A_3(3M6P)
DEF1B_ARATH
[Raw transfer]



EPE_A_5(1VEY)
DEF_LEPIN
[Raw transfer]



BRR_A_5(1RL4)
?
[Raw transfer]



FMT_A_8(1VEV)
DEF_LEPIN
[Raw transfer]



FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]



FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]



GOL_A_7(1N5N)
DEF_PSEAE
[Raw transfer]



MES_A_5(1VEV)
DEF_LEPIN
[Raw transfer]



FMT_A_3(1XEO)
DEF_ECOLI
[Raw transfer]



GOL_A_5(1N5N)
DEF_PSEAE
[Raw transfer]



BB4_A_8(3O3J)
DEF1B_ARATH
[Raw transfer]



QAP_A_3(4E9A)
?
[Raw transfer]



FMT_A_7(4DR8)
?
[Raw transfer]



EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]



DTT_A_5(1SV2)
DEF_LEPIN
[Raw transfer]



TRS_A_5(1VEZ)
DEF_LEPIN
[Raw transfer]



CHAIN_D_3(1ZY1)
DEF1A_ARATH
[Raw transfer]
-
CHAIN_E_4(4JE8)
?
[Raw transfer]
-
CHAIN_E_4(1ZY1)
DEF1A_ARATH
[Raw transfer]
-
CHAIN_D_3(4JE8)
?
[Raw transfer]
-
6 PsiBlast_PDB 99.3298%-112 - C2 -4JE8 4.2 ?
21 PsiBlast_CBE 97.9999%-110 - C2 -1ZY1 4.2 DEF1A_ARATH
5 PsiBlast_PDB 97.9698%-107 - C2 -4JE7 6.6 ?
3 PsiBlast_PDB 97.8899%-109 - C2 -1ZY1 3.7 DEF1A_ARATH
25 PsiBlast_CBE 97.5098%-108 - C2 -4JE7 6.8 ?
24 PsiBlast_CBE 96.9298%-109 - C2 -4JE8 3.8 ?
37 HHSearch 71.4038% -93 - C2 -3G5K 7.0 DEFM_HUMAN
11 PsiBlast_PDB 66.4737% -93 - C2 -1SV2 2.1 DEF_LEPIN
13 PsiBlast_PDB 64.4337% -93 - C2 -1VEY 3.2 DEF_LEPIN
38 HHSearch 64.3137% -95 - C2 -1Y6H 3.4 DEF_LEPIN
12 PsiBlast_PDB 63.9937% -94 - C2 -1VEV 3.5 DEF_LEPIN
14 PsiBlast_PDB 63.7237% -95 - C2 -1VEZ 3.6 DEF_LEPIN
49 HHSearch 63.7134%-112 * C2 *1RL4 4.1 ?
41 HHSearch 62.4432%-103 - C2 -3U04 6.2 ?
40 HHSearch 62.1038% -96 - C2 -3UWB 6.3 ?
48 HHSearch 61.0536% -73 - C2 -3E3U 5.6 DEF_MYCTU
47 HHSearch 60.8336% -94 - C2 -1N5N 2.6 DEF_PSEAE
16 PsiBlast_PDB 60.6535% -94 - C2 -3M6P 5.4 DEF1B_ARATH
17 PsiBlast_PDB 60.5935% -91 - C2 -3O3J 4.3 DEF1B_ARATH
20 PsiBlast_PDB 60.3935% -92 - C2 -3PN4 6.4 DEF1B_ARATH
28 Fugue 60.1334% -82 - C2 -1G2A 6.3 DEF_ECOLI
43 HHSearch 59.8633% -88 - C2 -4DR8 3.3 ?
50 HHSearch 58.6934% -91 - C2 -4E9A 5.5 ?
53 HHSearch 57.6038% -95 - C2 -2W3T 2.4 DEF_ECOLI
45 HHSearch 57.0738% -87 - C2 -1XEO 3.5 DEF_ECOLI