@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01327_DEF_HA: (2014-09-22 )
MTALNVLIYPDDHLKVVCEPVTKVNDAIRKIVDDMFDTMYQEKGIGLAAPQVDILQRIITIDVEGDKQNQFVLINPEILASEGETGIEEGCLSIPGFRALVPRKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYLSPLKRQRIKEKLIKYKKQIAKS

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BB2_A_9(1LRU)
DEF_ECOLI
[Raw transfer]




2BB_A_5(3K6L)
DEF_ECOLI
[Raw transfer]




BB1_A_7(1G27)
DEF_ECOLI
[Raw transfer]




BB2_A_7(1G2A)
DEF_ECOLI
[Raw transfer]




BB2_A_7(1G2A)
DEF_ECOLI
[Raw transfer]




MLN_A_4(1BSJ)
DEF_ECOLI
[Raw transfer]




MLN_A_4(1BSK)
DEF_ECOLI
[Raw transfer]




BB2_A_5(3U04)
?
[Raw transfer]




FMT_A_3(1XEN)
DEF_ECOLI
[Raw transfer]




FMT_A_3(1XEO)
DEF_ECOLI
[Raw transfer]




GOL_A_7(1N5N)
DEF_PSEAE
[Raw transfer]




SB7_A_7(2AI8)
DEF_ECOLI
[Raw transfer]




BB2_A_5(3UWB)
?
[Raw transfer]




FMT_A_3(2W3U)
DEF_ECOLI
[Raw transfer]




2PE_A_9(1BSZ)
DEF_ECOLI
[Raw transfer]




GOL_A_5(1N5N)
DEF_PSEAE
[Raw transfer]




FMT_A_5(1XEN)
DEF_ECOLI
[Raw transfer]




BB2_A_5(2OKL)
DEF2_BACCR
[Raw transfer]




NVC_A_3(3E3U)
DEF_MYCTU
[Raw transfer]




FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]




BRR_A_5(1RL4)
?
[Raw transfer]




FMT_A_10(1XEM)
DEF_ECOLI
[Raw transfer]




2PE_A_9(1ICJ)
DEF_ECOLI
[Raw transfer]




QAP_A_3(4E9A)
?
[Raw transfer]




FMT_A_7(4DR8)
?
[Raw transfer]




2PE_A_9(1BS4)
DEF_ECOLI
[Raw transfer]




EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]




EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]




CHAIN_D_4(1BS8)
DEF_ECOLI
[Raw transfer]

-

H2S_A_5(4AL2)
DEF_ECOLI
[Raw transfer]




CHAIN_D_4(1BS6)
DEF_ECOLI
[Raw transfer]

-

EDO_B_10(4DR8)
?
[Raw transfer]




10 PsiBlast_PDB 98.4464%-118 - C3 -1BS8 4.7 DEF_ECOLI
5 PsiBlast_PDB 98.2164%-117 - C3 -1ICJ 5.2 DEF_ECOLI
11 PsiBlast_PDB 98.0264%-116 - C3 -1BSZ 5.3 DEF_ECOLI
6 PsiBlast_PDB 97.7464%-115 - C3 -1BS4 6.4 DEF_ECOLI
8 PsiBlast_PDB 97.4364%-122 - C3 -1BS6 4.7 DEF_ECOLI
31 HHSearch 97.2565%-112 - C3 -1XEO 3.5 DEF_ECOLI
18 PsiBlast_PDB 96.9764%-113 - C3 -1XEN 3.5 DEF_ECOLI
22 Fugue 96.7765%-115 - C3 -1G2A 6.6 DEF_ECOLI
35 HHSearch 96.7165%-114 - C3 -2W3T 2.4 DEF_ECOLI
17 PsiBlast_PDB 96.3364%-113 - C3 -1XEM 2.8 DEF_ECOLI
16 PsiBlast_PDB 96.3264%-112 - C3 -1LRU 6.2 DEF_ECOLI
20 PsiBlast_PDB 96.2664%-111 - C3 -2AI8 4.3 DEF_ECOLI
4 PsiBlast_PDB 96.1764%-114 - C3 -2W3U 3.4 DEF_ECOLI
2 PsiBlast_PDB 95.8564%-119 - C3 -4AL2 2.8 DEF_ECOLI
14 PsiBlast_PDB 95.7264%-112 - C3 -1G27 6.2 DEF_ECOLI
1 PsiBlast_PDB 95.7265%-117 - C3 -3K6L 6.0 DEF_ECOLI
13 PsiBlast_PDB 94.5864%-114 - C3 -1BSK 7.1 DEF_ECOLI
12 PsiBlast_PDB 94.2864%-114 - C3 -1BSJ 6.9 DEF_ECOLI
33 HHSearch 92.7854%-107 - C3 -1N5N 2.6 DEF_PSEAE
34 HHSearch 83.8043%-114 - C3 -3U04 6.5 ?
43 HHSearch 83.0344%-113 - C3 -4DR8 3.3 ?
36 HHSearch 81.8539%-108 - C3 -4E9A 6.4 ?
37 HHSearch 80.7036%-108 - C3 -1RL4 4.2 ?
40 HHSearch 76.4233% -97 - C3 -3E3U 6.1 DEF_MYCTU
39 HHSearch 73.1438%-104 - C3 -1Y6H 3.4 DEF_LEPIN
49 HHSearch 72.5434% -98 - C3 -2OKL 5.7 DEF2_BACCR
46 HHSearch 67.9436%-108 - C3 -3UWB 6.3 ?