@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01909_TDT_HU: (2014-09-28 )
MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKGFRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMTGKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCEFRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAVLNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLVSCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSSWQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRQFERDLRRYATHERKMILDNHALYDKTKRIFLKAESEEEIFAHLGLDYIEPWERNA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AP5_A_2(4I2I)
TDT_MOUSE
[Raw transfer]



APC_A_4(4I2C)
TDT_MOUSE
[Raw transfer]



DCP_A_2(4I2J)
TDT_MOUSE
[Raw transfer]



APC_A_5(4I2B)
TDT_MOUSE
[Raw transfer]



APC_A_7(4I2H)
TDT_MOUSE
[Raw transfer]



DAD_A_5(1KEJ)
TDT_MOUSE
[Raw transfer]



APC_A_4(4I2D)
TDT_MOUSE
[Raw transfer]



APC_A_5(4I2E)
TDT_MOUSE
[Raw transfer]



D3T_A_4(4I27)
TDT_MOUSE
[Raw transfer]



GOL_A_5(4LZG)
?
[Raw transfer]



1FQ_A_4(4IQW)
TDT_MOUSE
[Raw transfer]



NACID_C_2(4I28)
TDT_MOUSE
[Raw transfer]
-
NACID_D_1(1KDH)
TDT_MOUSE
[Raw transfer]
-
NACID_C_2(4I2F)
TDT_MOUSE
[Raw transfer]
-
1FQ_A_3(4IQU)
TDT_MOUSE
[Raw transfer]



1FO_A_4(4IQV)
TDT_MOUSE
[Raw transfer]



1FO_A_2(4IQT)
TDT_MOUSE
[Raw transfer]



NACID_C_2(4I2G)
TDT_MOUSE
[Raw transfer]
-
NACID_C_2(4I27)
TDT_MOUSE
[Raw transfer]
-
CHAIN_P_3(4LZG)
?
[Raw transfer]
-
NACID_C_2(4I2H)
TDT_MOUSE
[Raw transfer]
-
NACID_C_2(4I2B)
TDT_MOUSE
[Raw transfer]
-
NACID_C_2(4I2A)
TDT_MOUSE
[Raw transfer]
-
NACID_C_2(4I29)
TDT_MOUSE
[Raw transfer]
-
NACID_C_2(4IQV)
TDT_MOUSE
[Raw transfer]
-
NACID_C_2(4IQW)
TDT_MOUSE
[Raw transfer]
-
NACID_C_2(4I2E)
TDT_MOUSE
[Raw transfer]
-
NACID_C_2(4I2C)
TDT_MOUSE
[Raw transfer]
-
4 PsiBlast_PDB 98.9781%-114 - C2 -4I27 8.6 TDT_MOUSE
16 PsiBlast_PDB 98.1581%-116 - C2 -4I2J 4.8 TDT_MOUSE
14 PsiBlast_PDB 97.9681%-118 - C2 -4I2H 4.9 TDT_MOUSE
15 PsiBlast_PDB 97.9281%-116 - C2 -4I2I 5.6 TDT_MOUSE
13 PsiBlast_PDB 97.5081%-110 - C2 -4I2G 8.1 TDT_MOUSE
10 PsiBlast_PDB 97.4781%-111 - C2 -4I2D 5.6 TDT_MOUSE
2 PsiBlast_PDB 97.2381%-114 - C2 -4IQT 3.9 TDT_MOUSE
18 PsiBlast_PDB 97.0581%-111 - C2 -4IQV 4.2 TDT_MOUSE
17 PsiBlast_PDB 97.0381%-110 - C2 -4IQW 5.0 TDT_MOUSE
8 PsiBlast_PDB 97.0181%-110 - C2 -4I2B 6.4 TDT_MOUSE
9 PsiBlast_PDB 96.9381%-111 - C2 -4I2C 5.5 TDT_MOUSE
11 PsiBlast_PDB 96.8681%-112 - C2 -4I2E 4.7 TDT_MOUSE
5 PsiBlast_PDB 96.8081%-114 - C2 -4I28 11.7 TDT_MOUSE
3 PsiBlast_PDB 96.7681%-113 - C2 -4IQU 4.6 TDT_MOUSE
12 PsiBlast_PDB 96.6281%-111 - C2 -4I2F 10.7 TDT_MOUSE
7 PsiBlast_PDB 96.5081%-109 - C2 -4I2A 9.4 TDT_MOUSE
6 PsiBlast_PDB 96.2481%-112 - C2 -4I29 13.1 TDT_MOUSE
19 PsiBlast_PDB 95.6882%-111 - C2 -1KDH 8.6 TDT_MOUSE
20 PsiBlast_PDB 94.9782%-104 - C2 -1KEJ 4.2 TDT_MOUSE
32 HHSearch 80.1045%-100 - C2 -4LZG 6.2 ?