@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02055_GLCM_M: (2014-09-28 )
MAARLIGFFLFQAVSWAYGAQPCIPKSFGYSSVVCVCNASYCDSLDPVTLPALGTFSRYESTRRGRRMELSVGAIQANRTGTGLLLTLQPEKKFQKVKGFGGAMTDATALNILALSPPTQKLLLRSYFSTNGIEYNIIRVPMASCDFSIRVYTYADTPNDFQLSNFSLPEEDTKLKIPLIHQALKMSSRPISLFASPWTSPTWLKTNGRVNGKGSLKGQPGDIFHQTWANYFVKFLDAYAKYGLRFWAVTAENEPTAGLFTGYPFQCLGFTPEHQRDFISRDLGPALANSSHDVKLLMLDDQRLLLPRWAEVVLSDPEAAKYVHGIAVHWYMDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVTGWTDWNLALNPEGGPNWVRNFVDSPIIVDIPKDAFYKQPMFYHLGHFSKFIPEGSQRVALVASESTDLETVALLRPDGSAVVVVLNRSSEDVPLTISDPDLGFLETVSPGYSIHTYLWRRQ

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_11(2YIH)
?
[Raw transfer]



MT5_A_12(2WCG)
GLCM_HUMAN
[Raw transfer]



NBV_B_12(2V3D)
GLCM_HUMAN
[Raw transfer]



LGS_B_16(2XWD)
GLCM_HUMAN
[Raw transfer]



LGS_A_9(2XWD)
GLCM_HUMAN
[Raw transfer]



NND_B_8(2V3E)
GLCM_HUMAN
[Raw transfer]



AMF_B_10(2XWE)
GLCM_HUMAN
[Raw transfer]



MT5_B_23(2WCG)
GLCM_HUMAN
[Raw transfer]



AMF_A_6(2XWE)
GLCM_HUMAN
[Raw transfer]



NBV_A_5(2V3D)
GLCM_HUMAN
[Raw transfer]



NND_A_4(2V3E)
GLCM_HUMAN
[Raw transfer]



GOL_B_21(3KE0)
GLCM_HUMAN
[Raw transfer]



BTB_A_4(2V3F)
GLCM_HUMAN
[Raw transfer]



GOL_B_16(3KEH)
GLCM_HUMAN
[Raw transfer]



CBU_B_11(2VT0)
GLCM_HUMAN
[Raw transfer]



CBU_A_3(2VT0)
GLCM_HUMAN
[Raw transfer]



INS_B_19(1Y7V)
GLCM_HUMAN
[Raw transfer]



INS_A_18(1Y7V)
GLCM_HUMAN
[Raw transfer]



NND_A_4(2V3E)
GLCM_HUMAN
[Raw transfer]
3 PsiBlast_PDB 98.7087%-103 - C6 -2V3F 4.1 GLCM_HUMAN
24 PsiBlast_CBE 98.6087%-101 - C6 -2WCG 3.5 GLCM_HUMAN
4 PsiBlast_PDB 98.5687%-102 - C6 -2VT0 2.6 GLCM_HUMAN
28 PsiBlast_CBE 98.4087%-100 - C6 -2V3D 4.6 GLCM_HUMAN
6 PsiBlast_PDB 98.3587%-104 - C6 -2XWD 4.4 GLCM_HUMAN
60 PsiBlast_CBE 98.2087%-102 - C6 -3KEH 2.4 GLCM_HUMAN
2 PsiBlast_PDB 98.1587% -99 - C6 -2V3E 5.7 GLCM_HUMAN
5 PsiBlast_PDB 98.1487%-103 - C6 -2WCG 3.6 GLCM_HUMAN
25 PsiBlast_CBE 98.0387%-104 - C6 -2VT0 2.8 GLCM_HUMAN
22 PsiBlast_CBE 97.9587%-102 - C6 -2XWE 4.6 GLCM_HUMAN
27 PsiBlast_CBE 97.9187%-100 - C6 -2V3E 5.6 GLCM_HUMAN
1 PsiBlast_PDB 97.8787%-100 - C6 -2V3D 4.7 GLCM_HUMAN
7 PsiBlast_PDB 97.7587%-103 - C6 -2XWE 5.7 GLCM_HUMAN
62 PsiBlast_CBE 97.5587%-103 - C6 -3KE0 2.3 GLCM_HUMAN
23 PsiBlast_CBE 97.2587%-106 - C6 -2XWD 4.1 GLCM_HUMAN
9 PsiBlast_PDB 97.0187% -98 - C6 -1Y7V 3.0 GLCM_HUMAN
58 PsiBlast_CBE 96.9287% -99 - C6 -1Y7V 2.7 GLCM_HUMAN