@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02244_CBPB2_: (2014-09-29 )
MKLCSLAVLVPIVLFCEQHVFAFQSGQVLAALPRTSRQVQVLQNLTTTYEIVLWQPVTADLIVKKKQVHFFVNASDVDNVKAHLNVSGIPCSVLLADVEDLIQQQISNDTVSPRASASYYEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQAAKNAIWIDCGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRMWRKNRSFYANNHCIGTDLNRNFASKHWCEEGASSSSCSETYCGLYPESEPEVKAVASFLRRNINQIKAYISMHSYSQHIVFPYSYTRSKSKDHEELSLVASEAVRAIEKISKNTRYTHGHGSETLYLAPGGGDDWIYDLGIKYSFTIELRDTGTYGFLLPERYIKPTCREAFAAVSKIAWHVIRNV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

922_A_7(2PJ0)
CBPB1_PIG
[Raw transfer]



ARG_A_18(3D68)
CBPB2_HUMAN
[Raw transfer]



ARG_C_20(3D68)
CBPB2_HUMAN
[Raw transfer]



ARG_B_19(3D68)
CBPB2_HUMAN
[Raw transfer]



GEM_C_20(3D67)
CBPB2_HUMAN
[Raw transfer]



GEM_A_18(3D67)
CBPB2_HUMAN
[Raw transfer]



GEM_B_19(3D67)
CBPB2_HUMAN
[Raw transfer]



578_A_7(2PJ1)
CBPB1_PIG
[Raw transfer]



528_A_7(2PIY)
CBPB1_PIG
[Raw transfer]



L06_A_7(1ZG9)
CBPB1_PIG
[Raw transfer]



606_A_7(2PIZ)
CBPB1_PIG
[Raw transfer]



L98_A_7(1ZG8)
CBPB1_PIG
[Raw transfer]



P20_A_7(1ZG7)
CBPB1_PIG
[Raw transfer]



720_A_4(2JEW)
CBPB1_PIG
[Raw transfer]



GOL_A_14(4IHM)
CBPT_THEVU
[Raw transfer]



VAL_C_6(2BO9)
CBPA4_HUMAN
[Raw transfer]



VAL_A_4(1PCA)
CBPA1_PIG
[Raw transfer]



GLY_A_4(3LMS)
CBPB2_HUMAN
[Raw transfer]



GOL_A_12(4IHM)
CBPT_THEVU
[Raw transfer]



GLU_A_4(1DTD)
CBPA2_HUMAN
[Raw transfer]



BEN_A_3(1NSA)
CBPB1_PIG
[Raw transfer]
26 PsiBlast_CBE 99.0899%-112 - C2 -3D68 3.6 CBPB2_HUMAN
3 PsiBlast_PDB 98.7099%-112 - C2 -3D68 3.3 CBPB2_HUMAN
21 PsiBlast_CBE 98.0899%-110 - C2 -3D67 3.4 CBPB2_HUMAN
22 PsiBlast_CBE 97.5799%-112 - C2 -3D67 3.6 CBPB2_HUMAN
2 PsiBlast_PDB 97.2999%-109 - C2 -3D67 4.5 CBPB2_HUMAN
25 PsiBlast_CBE 88.5599%-110 - C2 -3D68 3.4 CBPB2_HUMAN
6 PsiBlast_PDB 76.3599%-104 - C2 -3LMS 2.8 CBPB2_HUMAN
10 PsiBlast_PDB 76.3342%-101 - C2 -1NSA 2.9 CBPB1_PIG
40 HHSearch 71.9738% -95 - C2 -1PCA 3.4 CBPA1_PIG
18 PsiBlast_PDB 61.7149% -94 - C2 -2PIZ 6.3 CBPB1_PIG
16 PsiBlast_PDB 61.6849% -96 - C2 -2JEW 5.1 CBPB1_PIG
15 PsiBlast_PDB 61.2649% -93 - C2 -1ZG9 4.0 CBPB1_PIG
19 PsiBlast_PDB 61.2249% -94 - C2 -2PJ0 8.8 CBPB1_PIG
20 PsiBlast_PDB 61.1349% -95 - C2 -2PJ1 9.2 CBPB1_PIG
17 PsiBlast_PDB 60.9449% -94 - C2 -2PIY 8.7 CBPB1_PIG
14 PsiBlast_PDB 60.1749% -92 - C2 -1ZG8 3.9 CBPB1_PIG
13 PsiBlast_PDB 59.2349% -91 - C2 -1ZG7 5.2 CBPB1_PIG
47 HHSearch 56.5243% -88 - C2 -2BO9 3.7 CBPA4_HUMAN
48 HHSearch 55.9944% -88 * C2 *1DTD 3.0 CBPA2_HUMAN
50 HHSearch 49.2534% -89 - C2 -4IHM 2.8 CBPT_THEVU