@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02798_HPGDS_MOUSE: (2014-10-02 )
MPNYKLLYFNMRGRAEIIRYIFAYLDIKYEDHRIEQADWPKIKPTLPFGKIPVLEVEGLTIHQSLAIARYLTKNTDLAGKTALEQCQADAVVDTLDDFMSLFPWAEKDQDLKERMFNELLTHQAPRLLKDLDTYLGDKEWFIGNYVTWADFYWDICSTTLLVLKPGLLDIYPKLVSLRNKVQAIPAISAWILKRPQTKL

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CBD_B_8(3VI7)
HPGDS_HUMAN
[Raw transfer]




9PQ_A_5(4EDY)
HPGDS_HUMAN
[Raw transfer]




0O5_D_14(4EDZ)
HPGDS_HUMAN
[Raw transfer]




HQL_D_14(2CVD)
HPGDS_HUMAN
[Raw transfer]




HQL_B_12(2CVD)
HPGDS_HUMAN
[Raw transfer]




0O5_B_9(4EDZ)
HPGDS_HUMAN
[Raw transfer]




HQL_C_13(2CVD)
HPGDS_HUMAN
[Raw transfer]




HQL_A_11(2CVD)
HPGDS_HUMAN
[Raw transfer]




0O4_B_6(4EE0)
HPGDS_HUMAN
[Raw transfer]




7PQ_A_5(4EC0)
HPGDS_HUMAN
[Raw transfer]




0O5_A_6(4EDZ)
HPGDS_HUMAN
[Raw transfer]




D26_B_8(2VCX)
HPGDS_HUMAN
[Raw transfer]




D26_D_13(2VCX)
HPGDS_HUMAN
[Raw transfer]




0O5_C_12(4EDZ)
HPGDS_HUMAN
[Raw transfer]




0O4_A_4(4EE0)
HPGDS_HUMAN
[Raw transfer]




ZZA_B_7(2VCW)
HPGDS_HUMAN
[Raw transfer]




D26_C_11(2VCX)
HPGDS_HUMAN
[Raw transfer]




O16_C_13(1V40)
HPGDS_HUMAN
[Raw transfer]




D25_A_6(2VCQ)
HPGDS_HUMAN
[Raw transfer]




O16_B_12(1V40)
HPGDS_HUMAN
[Raw transfer]




D25_C_10(2VCQ)
HPGDS_HUMAN
[Raw transfer]




NZO_A_4(3EE2)
HPGDS_HUMAN
[Raw transfer]




D27_B_6(2VD0)
HPGDS_HUMAN
[Raw transfer]




CBD_A_6(3VI7)
HPGDS_HUMAN
[Raw transfer]




O16_D_14(1V40)
HPGDS_HUMAN
[Raw transfer]




D28_B_6(2VD1)
HPGDS_HUMAN
[Raw transfer]




D25_B_8(2VCQ)
HPGDS_HUMAN
[Raw transfer]




O16_A_11(1V40)
HPGDS_HUMAN
[Raw transfer]




M4M_D_11(3VI5)
HPGDS_HUMAN
[Raw transfer]




VC3_B_6(2VCZ)
HPGDS_HUMAN
[Raw transfer]




M4M_C_8(3VI5)
HPGDS_HUMAN
[Raw transfer]




KXO_A_4(3KXO)
HPGDS_HUMAN
[Raw transfer]




KXO_B_7(3KXO)
HPGDS_HUMAN
[Raw transfer]




DMS_B_6(4EDY)
HPGDS_HUMAN
[Raw transfer]




GSF_A_5(4EE0)
HPGDS_HUMAN
[Raw transfer]




2 PsiBlast_PDB 91.2280%-150 - C1 -4EC0 5.8 HPGDS_HUMAN
27 PsiBlast_CBE 72.5080%-148 - C1 -2VCQ 5.5 HPGDS_HUMAN
4 PsiBlast_CBE 70.1380%-143 - C1 -3EE2 5.1 HPGDS_HUMAN
33 PsiBlast_CBE 69.2780%-150 - C1 -4EDZ 7.0 HPGDS_HUMAN
18 PsiBlast_CBE 68.1680%-146 - C1 -2VCX 5.5 HPGDS_HUMAN
20 PsiBlast_CBE 65.8480%-147 - C1 -2VCX 5.5 HPGDS_HUMAN
12 PsiBlast_CBE 65.5980%-147 - C1 -2VD0 6.6 HPGDS_HUMAN
37 PsiBlast_CBE 65.3980%-149 - C1 -4EDY 3.6 HPGDS_HUMAN
38 PsiBlast_CBE 65.0980%-147 - C1 -4EDY 7.2 HPGDS_HUMAN
1 PsiBlast_PDB 64.6080%-148 - C1 -3KXO 7.4 HPGDS_HUMAN
8 PsiBlast_CBE 64.5380%-148 - C1 -2VD1 6.6 HPGDS_HUMAN
24 PsiBlast_CBE 63.8180%-145 - C1 -2VCW 4.7 HPGDS_HUMAN
35 PsiBlast_CBE 63.2880%-149 - C1 -4EE0 6.7 HPGDS_HUMAN
16 PsiBlast_CBE 62.2580%-146 - C1 -2VCZ 4.6 HPGDS_HUMAN
31 PsiBlast_CBE 61.5780%-145 - C1 -4EDZ 7.4 HPGDS_HUMAN
29 PsiBlast_CBE 61.3780%-145 - C1 -2VCQ 5.3 HPGDS_HUMAN
52 PsiBlast_CBE 60.9179%-148 * C1 *1V40 5.3 HPGDS_HUMAN
28 PsiBlast_CBE 59.5380%-143 - C1 -2VCQ 5.3 HPGDS_HUMAN
32 PsiBlast_CBE 58.9080%-147 - C1 -4EDZ 7.2 HPGDS_HUMAN
5 PsiBlast_CBE 58.7080%-145 - C1 -3KXO 7.1 HPGDS_HUMAN
34 PsiBlast_CBE 57.2880%-144 - C1 -4EDZ 7.4 HPGDS_HUMAN
51 PsiBlast_CBE 57.2579%-147 - C1 -1V40 6.5 HPGDS_HUMAN
41 PsiBlast_CBE 55.7879%-145 - C1 -3VI7 8.7 HPGDS_HUMAN
36 PsiBlast_CBE 55.5880%-149 - C1 -4EE0 6.8 HPGDS_HUMAN
48 PsiBlast_CBE 52.1379%-144 - C1 -2CVD 7.4 HPGDS_HUMAN
44 PsiBlast_CBE 49.3779%-142 - C1 -3VI5 5.6 HPGDS_HUMAN
43 PsiBlast_CBE 47.9179%-142 - C1 -3VI5 5.6 HPGDS_HUMAN
47 PsiBlast_CBE 47.8379%-145 - C1 -2CVD 7.2 HPGDS_HUMAN
19 PsiBlast_CBE 47.6780%-150 - C1 -2VCX 5.6 HPGDS_HUMAN
53 PsiBlast_CBE 44.8379%-143 - C1 -1V40 5.8 HPGDS_HUMAN
54 PsiBlast_CBE 42.9279%-142 - C1 -1V40 5.9 HPGDS_HUMAN
49 PsiBlast_CBE 41.4179%-142 - C1 -2CVD 7.2 HPGDS_HUMAN
42 PsiBlast_CBE 37.4479%-141 - C1 -3VI7 7.8 HPGDS_HUMAN
50 PsiBlast_CBE 34.6479%-139 - C1 -2CVD 7.4 HPGDS_HUMAN