@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07714_CSF1R_HUMAN: (2014-10-12 )
MGPGVLLLLLVATAWHGQGIPVIEPSVPELVVKPGATVTLRCVGNGSVEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAYLNLSSEQNLIQEVTVGEGLNLKVMVEAYPGLQGFNWTYLGPFSDHQPEPKLANATTKDTYRHTFTLSLPRLKPSEAGRYSFLARNPGGWRALTFELTLRYPPEVSVIWTFINGSGTLLCAASGYPQPNVTWLQCSGHTDRCDEAQVLQVWDDPYPEVLSQEPFHKVTVQSLLTVETLEHNQTYECRAHNSVGSGSWAFIPISAGAHTHPPDEFLFTPVVVACMSIMALLLLLLLLLLYKYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLSPGQDPEGGVDYKNIHLEKKYVRRDSGFSSQGVDTYVEMRPVSTSSNDSFSEQDLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRERDYTNLPSSSRSGGSGSSSSELEEESSSEHLTCCEQGDIAQPLLQPNNYQFC

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

647_A_2(4HVS)

[Raw transfer]



AAX_B_2(1Y6B)

[Raw transfer]



K11_A_2(3EWH)

[Raw transfer]



64M_A_2(4HW7)

[Raw transfer]



AAZ_A_2(1Y6A)

[Raw transfer]



5CN_B_2(2I1M)

[Raw transfer]



42Q_A_2(3VHE)

[Raw transfer]



5CN_A_2(2I0Y)

[Raw transfer]



6C3_A_3(2I0V)

[Raw transfer]



03X_A_2(3U6J)

[Raw transfer]



STI_A_4(1T46)

[Raw transfer]



B49_A_3(3G0F)
KIT_HUMAN
[Raw transfer]



BPK_A_2(3VHK)

[Raw transfer]



B49_A_2(3G0E)

[Raw transfer]



EDO_A_3(3VHK)

[Raw transfer]
2 PsiBlast_PDB 92.6082%-115 - C2 -2I0V 7.9
3 PsiBlast_PDB 90.9482%-122 - C2 -2I0Y 7.7
4 PsiBlast_PDB 90.5781%-110 - C2 -2I1M 7.3
1 PsiBlast_PDB 86.5487%-120 - C2 -4HW7 9.4
7 PsiBlast_PDB 80.2160%-105 - C2 -4HVS 9.5
16 PsiBlast_PDB 74.4847%-107 - C2 -3VHK 6.3
17 PsiBlast_PDB 74.4748%-112 * C2 *3VHE 10.2
15 PsiBlast_PDB 71.2947%-120 - C2 -1Y6B 7.8
14 PsiBlast_PDB 70.4147%-123 - C2 -1Y6A 6.0
18 PsiBlast_PDB 66.0446%-105 - C2 -3U6J 11.3
19 PsiBlast_PDB 63.1246%-108 - C2 -3EWH 10.7
9 PsiBlast_PDB 56.1250% -70 - C2 -3G0E 4.6
10 PsiBlast_PDB 52.1450% -69 - C2 -3G0F 4.2 KIT_HUMAN
13 PsiBlast_PDB 51.9750% -71 - C2 -1T46 6.5