@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07714_DDR2_HUMAN: (2014-10-12 )
MILIPRMLLVLFLLLPILSSAKAQVNPAICRYPLGMSGGQIPDEDITASSQWSESTAAKYGRLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIVARFVRFIPVTDHSMNVCMRVELYGCVWLDGLVSYNAPAGQQFVLPGGSIIYLNDSVYDGAVGYSMTEGLGQLTDGVSGLDDFTQTHEYHVWPGYDYVGWRNESATNGYIEIMFEFDRIRNFTTMKVHCNNMFAKGVKIFKEVQCYFRSEASEWEPNAISFPLVLDDVNPSARFVTVPLHHRMASAIKCQYHFADTWMMFSEITFQSDAAMYNNSEALPTSPMAPTTYDPMLKVDDSNTRILIGCLVAIIFILLAIIVIILWRQFWQKMLEKASRRMLDDEMTVSLSLPSDSSMFNNNRSSSPSEQGSNSTYDRIFPLRPDYQEPSRLIRKLPEFAPGEEESGCSGVVKPVQPSGPEGVPHYAEADIVNLQGVTGGNTYSVPAVTMDLLSGKDVAVEEFPRKLLTFKEKLGEGQFGEVHLCEVEGMEKFKDKDFALDVSANQPVLVAVKMLRADANKNARNDFLKEIKIMSRLKDPNIIHLLAVCITDDPLCMITEYMENGDLNQFLSRHEPPNSSSSDVRTVSYTNLKFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPDSVYKLMLSCWRRDTKNRPSFQEIHLLLLQQGDE

Atome Classification :

(13 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EBI_A_2(3I81)

[Raw transfer]



LGX_A_2(3NW5)

[Raw transfer]



LGV_A_2(3NW7)

[Raw transfer]



LGW_A_2(3NW6)

[Raw transfer]



0F4_A_4(3V5Q)
NTRK3_HUMAN
[Raw transfer]



STI_A_3(4BKJ)
DDR1_HUMAN
[Raw transfer]



0LI_A_3(3ZOS)
DDR1_HUMAN
[Raw transfer]



MUJ_A_2(4AT5)

[Raw transfer]



V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]



T6E_A_2(4AT4)

[Raw transfer]



LTI_A_2(4AT3)

[Raw transfer]



BMI_B_2(2OJ9)

[Raw transfer]



PDR_A_5(3LVP)
IGF1R_HUMAN
[Raw transfer]
2 PsiBlast_PDB 97.8167%-116 - C2 -4BKJ 11.3 DDR1_HUMAN
1 PsiBlast_PDB 95.7867%-117 - C2 -3ZOS 12.1 DDR1_HUMAN
6 PsiBlast_PDB 69.1946%-104 - C2 -4AT3 5.6
8 PsiBlast_PDB 67.8346%-102 - C2 -4AT5 7.5
7 PsiBlast_PDB 67.5946%-106 - C2 -4AT4 8.7
11 PsiBlast_PDB 66.2544%-109 - C2 -4AOJ 7.7 NTRK1_HUMAN
9 PsiBlast_PDB 63.6744%-112 - C2 -3V5Q 10.5 NTRK3_HUMAN
18 PsiBlast_PDB 57.7640% -88 - C2 -3NW5 7.0
19 PsiBlast_PDB 57.6640% -87 - C2 -3NW6 7.3
16 PsiBlast_PDB 56.8040% -90 * C2 *3I81 7.1
17 PsiBlast_PDB 55.4140% -85 - C2 -2OJ9 7.8
20 PsiBlast_PDB 54.6940% -86 - C2 -3NW7 7.3
14 PsiBlast_PDB 51.6940% -89 - C2 -3LVP 5.8 IGF1R_HUMAN