@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07714_JAK1_HUMAN: (2014-10-13 )
MQYLNIKEDCNAMAFCAKMRSSKKTEVNLEAPEPGVEVIFYLSDREPLRLGSGEYTAEELCIRAAQACRISPLCHNLFALYDENTKLWYAPNRTITVDDKMSLRLHYRMRFYFTNWHGTNDNEQSVWRHSPKKQKNGYEKKKIPDATPLLDASSLEYLFAQGQYDLVKCLAPIRDPKTEQDGHDIENECLGMAVLAISHYAMMKKMQLPELPKDISYKRYIPETLNKSIRQRNLLTRMRINNVFKDFLKEFNNKTICDSSVSTHDLKVKYLATLETLTKHYGAEIFETSMLLISSENEMNWFHSNDGGNVLYYEVMVTGNLGIQWRHKPNVVSVEKEKNKLKRKKLENKHKKDEEKNKIREEWNNFSYFPEITHIVIKESVVSINKQDNKKMELKLSSHEEALSFVSLVDGYFRLTADAHHYLCTDVAPPLIVHNIQNGCHGPICTEYAINKLRQEGSEEGMYVLRWSCTDFDNILMTVTCFEKSEQVQGAQKQFKNFQIEVQKGRYSLHGSDRSFPSLGDLMSHLKKQILRTDNISFMLKRCCQPKPREISNLLVATKKAQEWQPVYPMSQLSFDRILKKDLVQGEHLGRGTRTHIYSGTLMDYKDDEGTSEEKKIKVILKVLDPSHRDISLAFFEAASMMRQVSHKHIVYLYGVCVRDVENIMVEEFVEGGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNLLLAREGIDSECGPFIKLSDPGIPITVLSRQECIERIPWIAPECVEDSKNLSVAADKWSFGTTLWEICYNGEIPLKDKTLIEKERFYESRCRPVTPSCKELADLMTRCMNYDPNQRPFFRAIMRDINKLEEQNPDIVSEKKPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0MX_A_2(4E1Z)

[Raw transfer]



O19_A_5(4BBF)
JAK2_HUMAN
[Raw transfer]



0MY_A_2(4E20)

[Raw transfer]



ADP_A_2(4GVJ)

[Raw transfer]



19Q_A_2(4HVG)

[Raw transfer]



046_A_2(3UGC)

[Raw transfer]



933_A_3(4HVD)
?
[Raw transfer]



19R_A_2(4HVH)

[Raw transfer]



0X5_A_2(4GIH)

[Raw transfer]



19S_A_2(4HVI)

[Raw transfer]



3O4_A_5(4BBE)
JAK2_HUMAN
[Raw transfer]



TZ1_A_2(3NYX)

[Raw transfer]



0XH_A_2(4GJ2)

[Raw transfer]



0X6_A_2(4GII)

[Raw transfer]



IZA_A_2(3NZ0)

[Raw transfer]



0X2_A_7(4GFO)

[Raw transfer]



0XP_A_2(4GJ3)

[Raw transfer]
5 PsiBlast_PDB 52.5759% -79 - C1 -4GJ2 6.6
6 PsiBlast_PDB 51.4459% -80 - C1 -4GJ3 6.8
7 PsiBlast_PDB 51.0659% -79 - C1 -4GIH 6.4
8 PsiBlast_PDB 50.2059% -91 - C1 -3NYX 8.9
15 PsiBlast_PDB 49.8556% -82 - C1 -4BBF 8.1 JAK2_HUMAN
4 PsiBlast_PDB 49.8359% -79 - C1 -4GII 6.8
14 PsiBlast_PDB 49.5156% -83 - C1 -4BBE 7.9 JAK2_HUMAN
12 PsiBlast_PDB 47.4459% -84 - C1 -4E20 7.6
3 PsiBlast_PDB 45.3359% -80 - C1 -4GVJ 6.0
11 PsiBlast_PDB 45.2359% -79 - C1 -4E1Z 9.4
9 PsiBlast_PDB 44.1159% -90 - C1 -4GFO 5.0
10 PsiBlast_PDB 42.7359% -85 - C1 -3NZ0 7.9
16 PsiBlast_PDB 40.9956% -77 - C1 -3UGC 12.2
19 PsiBlast_PDB 25.6153% -77 - C1 -4HVH 5.7
20 PsiBlast_PDB 24.7653% -76 - C1 -4HVI 6.6
18 PsiBlast_PDB 24.3953% -75 - C1 -4HVG 5.9
17 PsiBlast_PDB 22.6953% -76 * C1 *4HVD 6.1 ?