@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07714_JAK1_MOUSE: (2014-10-13 )
MQYLNIKEDCNAMAFCAKMRSFKKTEVKQVVPEPGVEVTFYLLDREPLRLGSGEYTAEELCIRAAQECSISPLCHNLFALYDESTKLWYAPNRIITVDDKTSLRLHYRMRFYFTNWHGTNDNEQSVWRHSPKKQKNGYEKKRVPEATPLLDASSLEYLFAQGQYDLIKCLAPIRDPKTEQDGHDIENECLGMAVLAISHYAMMKKMQLPELPKDISYKRYIPETLNKSIRQRNLLTRMRINNVFKDFLKEFNNKTICDSSVHDLKVKYLATLETSTLTKHYGAEIFETSMLLISSENELSRCHSNDSGNVLYEVMVTGNLGIQWRQKPNVVPVEKEKNKLKRKKLEYNKHKKDDERNKLREEWNNFSYFPEITHIVIKESVVSINKQDNKNMELKLSSREEALSFVSLVDGYFRLTADAHHYLCTDVAPPLIVHNIQNGCHGPICTEYAINKLRQEGSEEGMYVLRWSCTDFDNILMTVTCFEKSEVLGGQKQFKNFQIEVQKGRYSLHGSMDHFPSLRDLMNHLKKQILRTDNISFVLKRCCQPKPREISNLLVATKKAQEWQPVYSMSQLSFDRILKKDIIQGEHLGRGTRTHIYSGTLLDYKDEEGIAEEKKIKVILKVLDPSHRDISLAFFEAASMMRQVSHKHIVYLYGVCVRDVENIMVEEFVEGGPLDLFMHRKSDALTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNLLLAREGIDSDIGPFIKLSDPGIPVSVLTRQECIERIPWIAPECVEDSKNLSVAADKWSFGTTLWEICYNGEIPLKDKTLIEKERFYESRCRPVTPSCKELADLMTRCMNYDPNQRPFFRAIMRDINKLEEQNPDIVSEKQPTTEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICMEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAIQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLIQCKFYIASDVWSFGVTLHELLTYCDSDFSPMALFLKMIGPTHGQMTVTRLVKTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTTFQNLIEGFEALLK

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0MX_A_2(4E1Z)

[Raw transfer]



0MY_A_2(4E20)

[Raw transfer]



O19_A_5(4BBF)
JAK2_HUMAN
[Raw transfer]



ADP_A_2(4GVJ)

[Raw transfer]



19Q_A_2(4HVG)

[Raw transfer]



19S_A_2(4HVI)

[Raw transfer]



046_A_2(3UGC)

[Raw transfer]



933_A_3(4HVD)
?
[Raw transfer]



0X5_A_2(4GIH)

[Raw transfer]



19R_A_2(4HVH)

[Raw transfer]



3O4_A_5(4BBE)
JAK2_HUMAN
[Raw transfer]



0XH_A_2(4GJ2)

[Raw transfer]



TZ1_A_2(3NYX)

[Raw transfer]



IZA_A_2(3NZ0)

[Raw transfer]



0X6_A_2(4GII)

[Raw transfer]



0X2_A_7(4GFO)

[Raw transfer]



0XP_A_2(4GJ3)

[Raw transfer]
7 PsiBlast_PDB 54.8060% -83 - C1 -4GIH 6.4
5 PsiBlast_PDB 53.0160% -84 - C1 -4GJ2 6.6
4 PsiBlast_PDB 51.8560% -83 - C1 -4GII 6.8
6 PsiBlast_PDB 51.6860% -85 - C1 -4GJ3 6.8
14 PsiBlast_PDB 48.6755% -87 - C1 -4BBE 7.9 JAK2_HUMAN
8 PsiBlast_PDB 48.1160% -96 - C1 -3NYX 8.9
10 PsiBlast_PDB 47.1060% -84 - C1 -4E1Z 9.4
11 PsiBlast_PDB 46.9860% -88 - C1 -4E20 7.6
3 PsiBlast_PDB 46.1660% -85 - C1 -4GVJ 6.0
15 PsiBlast_PDB 45.9555% -87 - C1 -4BBF 8.1 JAK2_HUMAN
12 PsiBlast_PDB 44.4460% -89 - C1 -3NZ0 7.9
9 PsiBlast_PDB 42.8260% -95 - C1 -4GFO 5.0
16 PsiBlast_PDB 34.6455% -81 - C1 -3UGC 12.2
19 PsiBlast_PDB 26.7153% -81 - C1 -4HVH 5.7
20 PsiBlast_PDB 23.8453% -80 - C1 -4HVI 6.6
17 PsiBlast_PDB 23.3953% -80 * C1 *4HVD 6.1 ?
18 PsiBlast_PDB 21.0253% -79 - C1 -4HVG 5.9