@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07714_NTRK3_HUMAN: (2014-10-13 )
MDVSLCPAKCSFWRIFLLGSVWLDYVGSVLACPANCVCSKTEINCRRPDDGNLFPLLEGQDSGNSNGNASINITDISRNITSIHIENWRSLHTLNAVDMELYTGLQKLTIKNSGLRSIQPRAFAKNPHLRYINLSSNRLTTLSWQLFQTLSLRELQLEQNFFNCSCDIRWMQLWQEQGEAKLNSQNLYCINADGSQLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIVTGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTVYYPPRVVSLEEPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPESTDNFILFDEVSPTPPITVTHKPEEDTFGVSIAVGLAAFACVLLVVLFVMINKYGRRSKFGMKGPVAVISGEEDSASPLHHINHGITTPSSLDAGPDTVVIGMTRIPVIENPQYFRQGHNCHKPDTYVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRLFNPSGNDFCIWCEVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKATPIYLDILG

Atome Classification :

(10 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0F4_A_4(3V5Q)
NTRK3_HUMAN
[Raw transfer]




351_A_3(3ETA)
INSR_HUMAN
[Raw transfer]




MUJ_A_2(4AT5)

[Raw transfer]




STI_A_3(4BKJ)
DDR1_HUMAN
[Raw transfer]




T6E_A_2(4AT4)

[Raw transfer]




0LI_A_3(3ZOS)
DDR1_HUMAN
[Raw transfer]




V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]




LTI_A_2(4AT3)

[Raw transfer]




IR1_A_3(4IBM)
?
[Raw transfer]




PDR_A_5(3LVP)
IGF1R_HUMAN
[Raw transfer]




1 PsiBlast_PDB 94.8495%-134 - C2 -3V5Q 10.9 NTRK3_HUMAN
4 PsiBlast_PDB 92.7378%-120 - C2 -4AT5 9.0
2 PsiBlast_PDB 92.5878%-125 - C2 -4AT3 6.9
3 PsiBlast_PDB 91.8978%-125 - C2 -4AT4 9.6
5 PsiBlast_PDB 85.8670%-129 - C2 -4AOJ 8.1 NTRK1_HUMAN
12 PsiBlast_PDB 69.6943%-114 - C2 -3ZOS 10.4 DDR1_HUMAN
13 PsiBlast_PDB 69.5743%-119 - C2 -4BKJ 8.3 DDR1_HUMAN
18 PsiBlast_PDB 68.2940%-109 * C2 *3ETA 11.9 INSR_HUMAN
19 PsiBlast_PDB 66.1639%-100 - C2 -4IBM 7.1 ?
15 PsiBlast_PDB 59.5939%-108 - C2 -3LVP 3.8 IGF1R_HUMAN